Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	3218610	103511247	57952	-0.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	103519638	103519934	3	-1.1518
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	103522484	195819871	38011	-0.0175
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	195820167	195820337	2	-1.8671
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	195820471	225764216	19118	-0.012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	225765091	225768228	3	-1.2093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	225775962	228802765	1503	-0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	228807528	228807542	2	-1.146
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	228808366	238579304	6982	-0.0155
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	238581919	238582765	5	-0.9524
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	238583700	247813706	5483	-0.0251
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	2	484222	242476062	131186	-0.0166
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	2212571	3003351	284	-0.0254
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	3003375	3007742	3	-1.1738
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	3008347	177743001	95754	-0.0165
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	177743488	177744570	2	-1.3473
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	177745468	197538677	10267	-0.019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	1053934	39695626	23878	-0.0156
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	39699024	44691314	2558	-0.2409
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	44695076	44796692	57	0.0863
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	44800984	45072796	121	-0.2495
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	45073054	45192567	76	0.1164
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	45192865	46130702	462	-0.2619
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	46136077	86450196	20009	0.3244
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	86455895	94273330	4264	-0.0183
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	94273813	94276480	2	-1.4606
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	94280089	100806181	3722	-0.088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	100806696	153952964	28931	0.3353
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	153955940	188763651	18602	-0.021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	914233	5640744	3262	-0.0214
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	5641346	5641845	3	-1.1834
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	5646827	8318413	2024	-0.02
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	8320923	8321506	3	-1.261
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	8321995	45306222	20618	-0.0185
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	45308363	180360469	74500	-0.2299
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	1014281	151758042	85455	-0.0166
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	151758305	151794071	23	-0.3926
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	151794395	170903919	10950	-0.0215
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	7	705284	158385118	81274	-0.0178
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	617667	98708875	53791	-0.0219
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	98710491	145232496	27696	0.339
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	789932	140938752	67993	-0.0141
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	415240	4536190	2570	-0.2537
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	4538472	5996375	970	0.8475
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	5997495	6184807	165	0.6238
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	6184844	6239803	53	0.8157
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	6249591	6393610	144	0.6156
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	6398978	6398982	4	-0.3136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	6398984	8437638	1583	0.6827
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	8439436	9578574	916	1.2011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	9769282	13356864	2732	0.7836
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	13357322	15469546	1752	0.9861
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	15469974	15908978	360	0.7512
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	15912958	15934921	19	0.387
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	15935675	17004055	780	0.8115
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	17006664	17074414	68	1.4291
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	17074578	17368618	214	0.8687
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	17368841	17476653	93	1.1287
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	17476686	17485587	10	0.8477
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	17495014	19352644	1036	1.358
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	19356243	20383905	802	1.5968
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	20385570	21067683	547	1.3415
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	21072872	21656997	397	1.5653
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	21660736	21678059	15	0.9702
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	21680164	21711204	19	1.6071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	21715808	24152448	1346	0.8649
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	24153310	24388288	174	0.1971
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	24388427	24426361	34	0.8513
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	24426473	26599244	1424	0.1526
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	26604155	26664932	52	0.7244
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	26665321	26739565	54	0.1554
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	26741149	26768622	23	0.816
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	26769225	26797947	19	0.1648
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	26798463	26824992	30	0.4841
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	26828325	26834031	5	0.1266
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	26837060	26910329	38	0.6512
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	26913852	27847428	472	0.1461
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	27849087	27869387	22	0.9205
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	27872006	29496456	1173	0.1646
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	29499570	30128658	529	0.6963
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	30130884	30704139	442	0.1502
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	30709448	30748498	25	1.1397
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	30750033	32834243	1385	0.173
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	32835308	32835725	2	-1.6685
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	32844516	135225087	58317	-0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	11	456120	3133174	912	-0.2311
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	11	3140100	8896255	3589	-0.0097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	11	8899400	8899668	3	-1.1489
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	11	8900394	134142530	72705	-0.0143
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	12	889902	19698168	10634	-0.0209
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	12	19698439	19701825	2	-2.7579
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	12	19702342	133161346	63263	-0.0167
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	13	19450806	28618160	5104	-0.0243
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	13	28618175	28618186	2	-1.4155
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	13	28618198	33348568	3294	-0.0185
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	13	33349845	33351057	3	-1.7126
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	13	33354968	114987458	48193	-0.0236
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	14	20501368	21338687	546	-0.2416
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	14	21432949	68796192	26015	-0.0177
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	14	68796799	68797269	4	-0.9196
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	14	68798905	105988038	22850	-0.0173
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	15	23687685	101884307	44490	-0.0168
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	653459	27862819	12856	-0.0866
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	27863004	27863023	2	-1.2588
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	27863135	30551731	499	-0.0318
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	30552477	30790268	85	0.1721
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	30790431	89379936	27328	-0.1458
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	17	987221	29704121	11500	-0.0391
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	17	29708155	29852653	71	0.1796
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	17	29854805	80917016	25398	-0.0275
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	18	329586	13947893	8064	-0.0255
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	18	13948537	13952635	4	-1.2368
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	18	13952779	77109240	34566	-0.0207
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	19	284018	58878226	23941	-0.0122
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	455764	38139570	21129	-0.0175
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	38140100	38407359	244	0.6219
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	38411406	38424222	8	0.173
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	38425608	38550444	93	0.6318
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	38551295	38621456	43	1.2043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	38621842	47720386	6141	-0.0076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	47722985	47913578	95	0.2066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	47914066	47918042	5	-0.0789
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	47919555	48140744	142	0.6832
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	48143362	49493745	682	0.8963
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	49495389	49496768	4	0.052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	49499016	49554653	39	0.6131
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	49556878	49988935	327	-0.01
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	49994667	49999884	4	0.8536
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	50000831	50054587	42	-0.0274
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	50055616	50633011	390	1.03
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	50633472	50968918	203	0.5999
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	50972956	51599878	410	-0.0246
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	51602488	51854481	232	0.6649
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	51860305	51883621	15	1.2138
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	51884576	52594937	429	0.0522
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	52595247	52618934	27	0.5871
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	52619796	52644733	20	-0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	52668126	54700402	1568	1.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	54701230	56462393	1310	0.7473
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	56463551	56692335	176	0.9809
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	56695582	56882238	146	1.4117
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	56888147	56907442	18	0.657
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	56910892	56938227	17	1.4401
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	56941728	58835835	1450	0.744
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	58836417	58899218	74	1.0268
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	58899565	58926438	29	-0.2898
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	58927190	58939031	19	1.0262
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	58942877	58985905	32	-0.3507
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	58986719	59042416	47	0.4195
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	59044356	59151630	65	-0.2247
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	59155840	59157134	3	1.9229
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	59158923	59226104	50	1.0651
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	59227255	59327921	65	1.6459
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	59328730	59331341	10	0.8382
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	59333285	59413278	68	1.0785
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	59413423	62219837	1401	0.8317
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	21	15347621	47678774	20569	-0.0218
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	22	17423930	49331012	16920	-0.0092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	X	3157107	154905589	63774	8e-04
