Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	1	3218610	239677185	124353	0.0719
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	1	239677566	239678115	2	-2.0695
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	1	239678224	247813706	4715	0.0795
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	2	484222	161782686	84934	0.0781
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	2	161783960	161784083	2	1.5831
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	2	161784195	165081484	1778	0.1192
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	2	165085069	165085699	2	-0.8417
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	2	165086083	235163870	40102	0.0891
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	2	235166639	235166761	2	-1.2767
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	2	235167678	242476062	4415	0.0613
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	3	2212571	159007122	86985	0.083
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	3	159013779	159024524	5	-0.8473
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	3	159025584	197538677	19357	0.0878
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	4	1053934	28298417	17040	0.0914
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	4	28302702	28302972	2	-1.0271
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	4	28305543	188763651	85658	0.0947
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	5	914233	50161542	25860	-0.7884
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	5	50161727	50584783	250	-0.5449
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	5	50584804	50623549	18	-0.8134
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	5	50624906	50625129	3	-3.9954
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	5	50625719	180360469	74023	-0.772
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	6	1014281	3914295	2153	0.0695
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	6	3915450	3917537	3	0.9456
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	6	3919215	14128341	7228	0.062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	6	14129538	14131033	6	-6.9697
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	6	14131867	22903331	6046	0.0674
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	6	22905317	22905803	3	0.9929
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	6	22905832	33023370	3848	0.0399
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	6	33023792	33023946	2	-1.1632
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	6	33024499	33050279	15	0.1021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	6	33052076	33055487	3	-1.174
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	6	33055780	170903919	77145	0.0919
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	7	705284	54607443	32042	0.0863
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	7	54607558	54607628	2	-1.1314
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	7	54607757	158385118	49250	0.0784
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	8	617667	104845420	57282	0.085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	8	104846209	104849193	2	-1.2669
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	8	104850478	145232496	24224	0.0867
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	9	789932	4166215	2400	-0.7948
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	9	4167046	4168771	2	-3.5084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	9	4169816	11010591	3642	-0.7781
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	9	11011600	11016456	5	-2.4699
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	9	11020591	21626573	7219	-0.7534
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	9	21702086	21864552	110	-3.99
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	9	21864673	22005317	92	-2.7323
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	9	22005330	23769754	1162	-3.9486
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	9	23771107	23778056	37	-1.8683
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	9	23779237	25719617	1080	-3.7489
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	9	25723678	38747688	7501	-0.7714
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	9	71039044	140938752	44678	0.0661
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	10	415240	29601508	20232	0.068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	10	29601616	29601919	2	-0.8331
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	10	29602198	135225087	60601	0.0746
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	11	456120	134142530	77220	0.0816
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	12	889902	133161346	73919	0.0882
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	13	19450806	81355931	35794	0.093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	13	81356466	81357252	3	-1.4009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	13	81357671	114987458	20828	0.0986
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	14	20501368	26763627	2944	0.081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	14	26769722	26769725	3	0.901
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	14	26769914	105988038	46474	0.0766
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	15	23687685	101884307	44514	0.0747
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	16	653459	89379936	40789	0.0467
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	17	987221	31368775	12390	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	17	31369056	31369057	2	-1.1889
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	17	31369929	80917016	24586	0.0849
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	18	329586	77109240	42643	0.0865
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	19	284018	58878226	23940	-0.014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	20	455764	62219837	37273	0.0591
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	21	15347621	47678774	20576	0.0672
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	22	17423930	49331012	16916	0.0327
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	X	3157107	68413421	26268	0.0094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	X	68413651	68414853	3	-2.6999
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	X	68415694	79205337	3751	-0.0134
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	X	79205972	79210205	2	-3.564
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F04_896484	X	79210454	154905589	33637	0.0022
