Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	1	3208470	225131343	115758	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	1	225136300	225138015	2	-1.6379
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	1	225138583	245880329	13298	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	2	474222	242124735	131248	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	3	526235	199023074	106364	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	4	1043934	189836143	102705	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	5	967233	114033048	60572	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	5	114043072	114043490	2	-1.2788
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	5	114045641	169921638	34352	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	5	169923956	169925479	6	-1.2637
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	5	169926713	180293075	5544	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	6	959281	44479692	26150	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	6	44489299	44491431	3	-0.9512
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	6	44493059	92238990	24414	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	6	92239969	92271118	21	0.5225
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	6	92271202	170745844	45851	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	7	671810	55661680	32931	0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	7	55662372	55666246	3	-1.0809
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	7	55669201	158077879	48355	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	8	607667	145304484	81514	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	9	779932	10122607	5654	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	9	10122696	10122710	2	-1.2672
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	9	10124671	113388014	46670	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	9	113388385	113388598	3	0.9914
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	9	113391050	140058573	15671	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	10	405240	135075077	80841	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	11	446120	133647740	77247	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	12	760163	131671419	73934	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	13	18348806	114005560	56634	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	14	19571208	105059083	49433	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	15	21238778	72101197	28847	-0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	15	72101222	72101268	2	1.3374
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	15	72101508	99701830	15671	-0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	16	593460	7642811	3064	-0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	16	7644204	7644409	3	0.8833
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	16	7647920	10272373	2043	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	16	10273777	10275388	3	-0.9826
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	16	10275394	82351496	33094	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	16	82351498	82351507	2	-1.8738
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	16	82351525	87907437	2646	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	17	933971	78510305	36980	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	18	319586	75210228	42647	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	19	235018	63570038	23945	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	20	403764	15905841	9671	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	20	15906926	15916880	15	-0.3827
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	20	15916990	61690281	27588	-8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	21	14269492	46503202	20579	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	22	15803930	33086718	8068	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	22	33087006	33091569	14	-0.3737
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	22	33091573	47717016	8840	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	X	3167107	29229904	11679	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	X	29230759	29232664	2	-3.1841
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	X	29233172	107630991	30411	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	X	107631694	107633087	2	-4.2772
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	X	107633300	141192437	15403	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	X	141192944	141193412	3	-1.6749
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	X	141193490	154558783	6205	0.0023
