Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	1	3218610	227064720	115816	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	1	227069677	227071392	2	-1.6379
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	1	227071960	247813706	13296	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	2	484222	242476062	131240	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	3	2212571	197538677	106357	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	4	1053934	188763651	102711	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	5	914233	114005149	60571	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	5	114015173	114015591	2	-1.2788
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	5	114017742	169989060	34353	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	5	169991378	169992901	6	-1.2637
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	5	169994135	180360469	5544	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	6	1014281	44371714	26151	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	6	44381321	44383453	3	-0.9512
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	6	44385081	92182269	24415	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	6	92183248	92214397	21	0.5225
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	6	92214481	170903919	45858	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	7	705284	55694186	32930	0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	7	55694878	55698752	3	-1.0809
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	7	55701707	158385118	48357	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	8	617667	145232496	81521	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	9	789932	10132607	5654	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	9	10132696	10132710	2	-1.2672
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	9	10134671	114348193	46681	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	9	114348564	114348777	3	0.9914
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	9	114351229	140938752	15672	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	10	415240	135225087	80839	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	11	456120	134142530	77237	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	12	889902	133161346	73929	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	13	19450806	114987458	56630	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	14	20501368	105988038	49431	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	15	23687685	74314144	28846	-0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	15	74314169	74314215	2	1.3374
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	15	74314455	101884307	15670	-0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	16	653459	7702810	3064	-0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	16	7704203	7704408	3	0.8833
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	16	7707919	10364872	2043	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	16	10366276	10367887	3	-0.9826
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	16	10367893	83793995	33028	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	16	83793997	83794006	2	-1.8738
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	16	83794024	89379936	2646	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	17	987221	80917016	36980	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	18	329586	77109240	42644	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	19	284018	58878226	23945	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	20	455764	15957841	9673	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	20	15958926	15968880	15	-0.3827
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	20	15968990	62219837	27588	-8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	21	15347621	47678774	20578	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	22	17423930	34756718	8067	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	22	34757006	34761569	14	-0.3737
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	22	34761573	49331012	8840	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	X	3157107	29319983	11680	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	X	29320838	29322743	2	-3.1841
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	X	29323251	107744335	30426	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	X	107745038	107746431	2	-4.2772
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	X	107746644	141364771	15408	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	X	141365278	141365746	3	-1.6749
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F06_896618	X	141365824	154905589	6202	0.0022
