Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	61735	98588	16	-0.7214
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	98602	404171	14	0.1386
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	534551	718663	7	-0.451
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	723317	1510801	189	0.075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	1627918	1663396	13	0.6921
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	1663831	16851514	8492	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	16869363	16970456	43	-0.3
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	17005734	17017530	22	0.0747
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	17017630	17114712	36	-0.3711
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	17177045	19241904	1529	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	19242343	19243685	2	-2.1427
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	19244021	25583341	3804	0.0109
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	25593128	25646986	28	-1.4537
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	25661501	72768498	28864	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	72768916	72811133	45	-0.9433
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	72811148	74300005	906	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	74300016	74312427	5	-1.2118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	74314026	106019205	20130	0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	106019236	106022375	16	0.8286
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	106024055	108901371	2017	0.0183
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	108910017	108986197	13	-0.7532
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	109013908	110221727	626	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	110224384	110226378	8	1.1994
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	110226487	110227515	7	0.2355
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	110232974	110242953	18	1.9339
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	110244998	148870400	8348	0.0159
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	148870937	149229808	125	-0.4656
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	149229843	152555527	1550	0.0258
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	152555706	152579449	25	-0.6117
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	152579468	196801805	29862	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	196801850	196835106	19	-0.5908
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	196835498	196844167	15	-1.254
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	196844192	196901753	36	-0.7855
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	1	196905159	249224388	35903	0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	2	12784	4205687	2988	0.0161
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	2	4213864	4223725	40	-0.455
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	2	4223833	34691069	21085	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	2	34699315	34737163	47	0.6246
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	2	34737556	52743925	13048	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	2	52754468	52754881	7	0.8017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	2	52758753	52781542	33	0.3366
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	2	52787949	86937687	21946	0.0101
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	2	86953070	86953854	2	-1.5686
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	2	86970406	106880095	7730	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	2	106880713	106885357	11	0.5888
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	2	106887255	180418490	44500	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	2	180418923	180421869	22	-0.7525
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	2	180421888	243089456	38609	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	3	60345	6646543	5848	0.0135
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	3	6651128	6655078	24	-0.4524
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	3	6655248	27007231	14515	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	3	27008520	27013967	4	-1.1849
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	3	27020354	68746164	27484	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	3	68746259	68747413	14	-1.3159
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	3	68748758	129763698	34749	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	3	129766586	129806998	53	0.6026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	3	129808276	145641922	9897	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	3	145641934	145644166	5	-0.9562
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	3	145644187	162532950	10402	0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	3	162534730	162540490	6	1.6577
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	3	162545716	197896118	21975	0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	4	12281	10210390	5803	-0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	4	10223416	10231498	28	-1.69
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	4	10234214	10390715	178	-0.0252
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	4	10392354	10400668	16	0.4833
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	4	10402718	25556172	11026	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	4	25556580	25578269	19	0.5051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	4	25585383	69284591	25282	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	4	69288138	69288142	3	-1.7569
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	4	69294799	69360489	14	0.2639
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	4	69367142	69485979	67	-0.2467
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	4	69489335	69672721	65	0.0418
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	4	69678895	69707312	18	-1.301
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	4	69708718	172369346	62433	0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	4	172374884	172377776	12	1.11
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	4	172380371	172987928	396	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	4	172989148	172989533	12	-1.52
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	4	172995979	191027923	12127	0.0123
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	5	15532	8702240	6969	0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	5	8702522	8747142	46	-0.8281
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	5	8749731	57321646	28891	0.0079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	5	57326027	57333533	32	1.6081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	5	57338357	68846303	7305	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	5	68867294	69074977	2	1.8039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	5	69074991	177198449	67904	0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	5	177227551	177232605	3	2.5096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	5	177254965	177386313	21	0.271
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	5	177390075	177400248	7	-0.9082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	5	177400283	180378710	1786	0.0216
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	5	180378888	180418103	18	0.6651
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	5	180433225	180790320	171	0.0293
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	6	149661	26739025	20287	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	6	26742099	26754393	7	0.9692
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	6	26755915	29836239	1442	-0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	6	29836475	29881347	34	0.3952
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	6	29895973	32581889	1223	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	6	32582203	32602107	10	-0.8031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	6	32602269	53931151	13764	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	6	53931230	53931855	6	1.397
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	6	53935348	54694840	499	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	6	54694874	54695142	2	-1.9545
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	6	54699752	78962874	12802	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	6	78962889	79035174	112	0.3763
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	6	79035185	81284971	1437	0.0134
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	6	81285024	81285507	11	-0.9388
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	6	81285524	81288130	6	-0.2874
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	6	81288153	81289534	8	-0.8769
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	6	81294341	103738188	14027	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	6	103738224	103765670	44	0.7128
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	6	103765711	171051005	44253	0.0058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	43355	9174771	5426	0.0142
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	9178376	9178623	4	-1.3809
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	9179289	11920350	2164	0.0138
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	11920873	11921419	5	-1.0672
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	11924252	22434780	8507	0.0115
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	22435472	22436487	2	-2.1733
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	22438754	38294996	11335	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	38297835	38398047	124	0.3221
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	38400957	54386505	11010	0.0083
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	54386509	54386517	5	-1.8303
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	54393488	56957104	1627	-0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	56959176	57142166	13	0.5668
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	57154424	57534527	267	0.072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	57536111	57536638	3	-1.6571
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	57536709	109433798	26902	0.0069
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	109437092	109453910	35	0.503
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	109453982	126044923	10039	0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	126044974	126046877	15	0.6252
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	126046878	133785195	4706	0.0108
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	133785211	133806244	36	0.5659
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	133808792	136447836	1843	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	136453236	136457138	5	-1.2931
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	136458150	141763124	3349	0.0105
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	141769643	141799117	46	-0.346
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	141799160	142474939	447	0.0903
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	142476719	142486045	27	0.8863
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	142486115	143909445	842	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	143911624	144066947	39	0.3752
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	144074929	149845988	3611	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	149847287	149847740	2	-3.0382
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	149851568	153147638	1968	0.0148
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	153147645	153147712	2	-2.5927
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	153147715	154389895	866	0.0158
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	154393171	154399613	4	-1.8446
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	7	154400830	159127004	3247	0.0117
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	8	31254	593041	327	0.0373
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	8	594944	595908	10	0.9428
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	8	601043	2874353	1964	0.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	8	2889892	2890763	3	-1.7146
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	8	2896524	12232416	9016	0.0214
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	8	12233640	12242155	19	0.4372
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	8	12242515	18265154	5417	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	8	18266157	18271185	4	-1.7426
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	8	18271387	23402308	3945	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	8	23407740	23407871	5	-1.2442
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	8	23407905	24974476	1142	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	8	24974522	24984333	25	0.6799
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	8	24991104	39230659	9036	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	8	39235603	39386965	58	-1.9598
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	8	39388299	146298155	65017	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	9	46587	23361805	20463	0.0158
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	9	23363115	23373484	8	0.8765
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	9	23378488	43187967	10921	0.0083
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	9	43315670	43757346	35	-0.4476
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	9	43767558	68183981	246	0.0349
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	9	68186051	68186059	5	1.6599
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	9	68188340	141091394	48272	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	10	72759	18121033	14899	0.0095
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	10	18128247	18136748	2	1.5406
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	10	18150761	24377674	4349	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	10	24377675	24377918	7	-1.3553
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	10	24377920	56445616	17962	0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	10	56452949	56468437	13	0.7786
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	10	56472264	135506704	53881	0.0075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	11	198510	4239054	1791	0.0185
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	11	4250013	4301376	18	-0.6542
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	11	4301391	4968117	670	0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	11	4968510	4975705	28	0.7722
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	11	4976257	5794692	811	-0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	11	5794708	5812360	23	0.6336
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	11	5816186	18952562	9446	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	11	18952590	18970748	42	-0.3073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	11	18971175	42813151	17201	0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	11	42816486	42818039	2	-2.5404
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	11	42820603	134944770	57139	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	12	150442	1534549	811	0.0311
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	12	1539270	1541560	2	1.3036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	12	1542875	4560028	2257	0.014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	12	4563153	4563810	3	-1.2879
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	12	4564192	11214145	4198	0.0103
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	12	11215372	11251874	16	0.676
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	12	11256829	37987726	16466	0.0103
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	12	38012567	38014018	2	-1.7444
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	12	38034358	45904438	4779	0.018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	12	45905840	45909537	3	-1.6269
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	12	45913292	133778189	56561	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	13	19026949	39052811	14288	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	13	39057572	39058056	2	-1.5532
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	13	39065057	59046766	12549	0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	13	59047532	59052520	5	-0.9867
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	13	59053141	72476988	8321	0.0098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	13	72477555	72480556	4	-2.6444
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	13	72480605	115108397	29155	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	14	19002124	19620051	46	0.0953
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	14	19660853	20424926	145	0.7141
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	14	20425509	22378797	1323	0.0156
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	14	22378835	22988022	570	0.248
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	14	22988571	106538062	53085	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	14	106541753	106561441	12	-2.0349
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	14	106567100	107174572	341	0.0854
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	14	107176213	107178603	6	-1.314
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	14	107179496	107285437	71	0.0426
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	15	20016328	20203961	47	-0.0433
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	15	20206939	22673399	375	0.4054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	15	22681076	30370031	4679	0.0273
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	15	30386411	30792569	105	-0.4255
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	15	30795789	45193617	8925	0.0102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	15	45203398	45235082	15	-0.7658
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	15	45238744	74763881	19322	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	15	74764726	74766882	2	-1.6102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	15	74768101	76891241	893	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	15	76891511	76902179	22	0.7634
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	15	76902194	102469040	17692	0.0114
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	16	60777	19945650	13534	0.0174
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	16	19945808	19970818	31	0.3599
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	16	19970865	70179396	22559	0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	16	70179569	70187194	7	0.7609
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	16	70197767	78371608	5649	0.0117
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	16	78372440	78384765	16	0.9591
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	16	78385001	83888823	6241	0.0118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	16	83889680	83891460	2	-1.8486
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	16	83891657	90287535	4404	0.017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	17	526	16654301	10510	0.0154
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	17	16657331	16741528	15	0.5851
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	17	16741784	18278828	889	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	17	18282549	18283513	11	0.3915
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	17	18283539	18319862	19	-0.0441
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	17	18355392	18412558	18	-1.5175
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	17	18426461	18464586	10	-0.6116
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	17	18465221	44163098	12042	0.0121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	17	44165803	44364170	125	0.2817
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	17	44394412	44752283	47	-0.4045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	17	44752300	51717906	4077	0.0125
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	17	51726992	51727181	2	-2.477
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	17	51728544	77366789	15905	0.009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	17	77368153	77389101	17	0.5855
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	17	77400623	78882840	809	0.0189
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	17	78885690	78886782	5	-0.8316
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	17	78890129	81049726	804	-6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	18	11543	58473410	36690	0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	18	58473803	58479274	10	-0.8969
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	18	58485893	75691372	12769	0.0115
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	18	75691430	75694241	2	-1.7784
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	18	75696725	78015057	1352	0.0245
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	19	90910	24226399	11103	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	19	24230367	24235203	6	-1.2878
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	19	24236514	24375449	102	0.0188
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	19	24379102	24402242	10	-0.8451
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	19	24419375	24460818	16	0.2692
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	19	24461420	24464957	9	-0.7912
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	19	24487682	35849493	5580	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	19	35855353	35861779	20	-0.4305
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	19	35861848	44905905	4697	0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	19	44906524	44906547	2	-1.5241
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	19	44906619	53530745	4384	0.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	19	53531335	53547361	12	0.5987
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	19	53552229	53867300	239	0.0243
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	19	53871390	53929764	51	-0.9486
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	19	53930317	59097854	3126	0.0249
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	20	61305	61548	8	0.3591
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	20	61582	1560543	1192	0.0339
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	20	1560562	1560999	6	0.6875
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	20	1561580	1593849	40	2.303
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	20	1593893	14801493	9958	0.0137
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	20	14801725	14801913	3	-1.5164
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	20	14806715	62916068	31295	0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	20	62954695	62956153	5	-0.5519
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	21	10736871	48096957	24415	0.0119
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	22	16052528	18626129	1191	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	22	18626234	18629153	7	-1.0652
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	22	18630060	22752462	2450	0.0529
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	22	22752680	22752880	4	1.0869
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	22	22757321	24330218	964	0.0501
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	22	24330269	24331967	2	-2.2243
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	22	24332625	42892596	12814	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	22	42897282	42950491	25	0.4507
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	22	42955431	51234455	6108	0.0151
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	X	168477	146268151	79502	0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	X	146270299	146275870	5	-3.5648
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	X	146278906	155182354	5033	0.0221
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F07_896474	Y	2650438	59018259	8635	-0.9289
