Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	51598	1618686	229	-0.0287
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	1631963	1662463	14	0.4598
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	1677447	16918348	8562	-0.0107
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	16920783	16987299	23	0.306
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	17049632	72522941	34135	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	72528701	72535958	9	-0.8974
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	72541006	72583526	45	0.4993
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	72583664	105814899	21049	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	105820728	105823898	17	0.6792
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	105825578	108531282	1943	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	108535758	108539019	3	-0.8985
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	108540627	110029038	725	0.01
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	110034497	110041701	17	-0.4556
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	110044476	112491849	1958	0.0125
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	112497488	112498913	25	0.4224
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	112507479	150822151	8043	0.0103
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	150822330	150852862	31	1.4104
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	150852902	195007990	29782	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	195010759	195089940	82	0.2396
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	195090236	207825250	8524	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	207826594	207827342	2	-1.1699
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	207829498	208137685	297	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	208148236	208150607	3	1.4475
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	208153175	212704431	3099	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	212705059	212705080	2	-1.0749
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	212705876	214691511	1353	-0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	214701837	214718482	21	-1.0582
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	214721046	215233367	456	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	215233462	215233599	2	-1.1489
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	215234215	225841528	6980	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	225843772	225844645	2	-1.3094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	225845134	238457870	9284	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	238458363	238460762	7	0.6404
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	238462728	246666920	5713	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	246667419	246707815	17	0.4223
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	246716109	246804070	24	0.0416
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	246815817	246861912	30	-0.8359
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	1	246862475	247191011	147	0.0212
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	2	2784	165844	92	0.0857
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	2	166395	166411	2	-1.0981
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	2	168283	5219034	3725	-0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	2	5221318	5221466	2	1.2329
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	2	5223520	34373977	20194	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	2	34377482	34379084	2	1.0426
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	2	34379471	34552819	96	-0.0276
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	2	34554898	34590667	46	-2.0929
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	2	34591060	49376402	10765	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	2	49386546	49394694	6	-0.9695
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	2	49398545	50829675	1066	-0.01
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	2	50829963	50830356	5	-0.7334
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	2	50831483	52608385	1215	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	2	52612257	52635046	33	0.428
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	2	52641453	180121616	74195	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	2	180126456	180130382	30	-0.6929
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	2	180133888	208063200	16448	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	2	208063423	208067581	16	-0.9429
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	2	208067721	213077863	3193	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	2	213078607	213078947	2	-2.8658
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	2	213081233	242738129	18945	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	35345	199602	156	0.014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	205022	207800	4	-0.7759
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	209877	751321	456	-0.0095
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	751632	751636	2	-1.1364
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	752652	1756803	936	0.0171
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	1757524	1760876	5	-1.1423
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	1764158	12119982	8545	0.0075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	12120349	12120362	2	-1.2034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	12122150	15475937	2361	-0.008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	15476690	15477134	3	-0.9699
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	15479742	16215560	482	-0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	16215633	16216183	5	-2.7874
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	16216329	96938796	49032	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	96949570	96950800	2	-2.6686
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	96951370	131263566	20649	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	131268630	131288926	47	0.5728
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	131289614	150445666	11922	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	150446085	150450811	25	-0.8396
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	150453770	163995433	8349	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	163995786	164007552	10	0.9067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	164011324	164023184	10	-0.5117
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	164028410	164098609	42	0.639
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	164106536	164197211	78	-0.0229
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	164200421	164202256	2	-2.665
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	164208853	167995273	2165	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	167997718	168013637	8	0.5622
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	168017125	170212874	1198	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	170216096	170221322	2	-1.9003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	170222521	176563305	4217	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	176563441	176564019	5	-0.9863
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	176569482	194360656	11530	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	194360739	194361700	5	0.747
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	194363167	196122605	1175	-0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	196122635	196123134	4	-0.868
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	196123769	199322975	1520	0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	3	199329613	199380515	20	-0.5299
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	2281	4217419	1716	0.0102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	4217884	4217898	2	-1.5915
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	4218034	9819488	4087	-0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	9823258	9839895	23	1.3229
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	9839910	9840596	6	0.888
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	9843312	9844366	7	0.5753
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	9845240	9999813	171	-0.0218
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	10001452	10009766	16	-2.1328
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	10011816	34455449	16813	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	34462895	34464416	6	-0.5323
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	34466911	34495165	27	-0.2112
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	34495505	34501120	5	-0.7385
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	34506267	64376535	16589	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	64380064	64390853	29	-0.3286
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	64399026	69054598	2878	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	69057536	69171930	66	-0.3339
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	69187710	70162233	332	0.0334
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	70162241	70266388	53	-0.7519
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	70266611	70324990	32	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	70328729	70329194	2	1.0436
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	70332354	70424305	78	-0.0139
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	70424450	70425368	2	0.9812
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	70426477	76251680	3355	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	76252810	76253070	3	-0.9346
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	76253815	90647193	9130	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	90647222	90647517	3	-1.1489
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	90648815	92731644	1261	0.006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	92732294	92734726	2	-1.6636
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	92738087	109605037	9888	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	109607255	109608084	2	-2.8485
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	109623546	138311870	16881	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	138311966	138314422	15	-0.6682
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	138314571	149317319	6862	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	149318386	149320383	4	-1.1275
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	149322383	162093450	7902	-0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	162099468	162104369	22	-0.6365
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	162104408	172605921	6676	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	172611459	172614351	12	-1.2505
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	172616946	173224503	397	0.0081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	173225723	173226108	12	-1.8162
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	173232554	177133156	2219	-6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	177136019	177136057	2	-1.1319
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	177138083	179628436	1673	-0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	179629339	179629357	3	-1.2742
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	4	179633000	191261904	8230	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	68532	738748	308	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	751371	832860	30	-1.0961
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	832881	854571	7	-0.1325
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	854765	862806	6	-0.6548
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	870850	5428582	3789	-0.0173
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	5429362	5430634	5	-1.1937
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	5431823	7222476	1601	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	7230338	7242925	26	-0.8677
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	7255635	7296477	34	0.0419
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	7301472	7308921	6	-0.9375
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	7308984	8819520	1217	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	8820977	8821044	2	-1.3273
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	8821529	11214625	2101	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	11215636	11215771	3	-0.8604
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	11220277	12868780	1089	-0.0144
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	12868865	12891533	13	0.8113
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	12902201	15048596	1558	-0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	15049395	15053268	3	0.8015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	15055489	15771492	415	-0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	15772222	15773597	11	-0.7485
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	15776346	25082464	5655	-0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	25089177	25089398	3	-0.9319
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	25089761	26012019	563	0.0104
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	26015193	26017489	2	-1.1756
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	26017817	27560209	893	-0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	27561147	27561727	8	-0.6458
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	27561744	46227641	11450	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	46231640	46235192	4	-0.9531
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	46245056	46287063	13	0.0163
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	46306765	46309259	8	0.9061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	46313969	57357403	5082	0.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	57361784	57369272	31	1.3732
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	57369290	74216965	9682	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	74219619	74221829	3	-1.184
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	74227881	96936826	13177	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	96937285	96942439	2	-1.0669
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	96943590	103879120	4011	0.013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	103888272	103888503	4	-1.1879
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	103888948	117416321	9408	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	117416509	117432239	11	-0.6816
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	117434704	151494364	21390	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	151495579	151500615	16	-0.5583
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	151500690	155407683	2661	-0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	155409350	155415307	14	-0.6584
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	155427828	175392693	14097	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	175398295	175402113	2	1.2354
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	175402930	177131055	728	-0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	177160157	177165211	3	2.3234
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	177187571	180307129	1814	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	180311316	180350709	19	-2.2535
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	5	180365831	180722926	171	-0.0253
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	94661	199283	101	0.0363
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	202353	239837	23	0.6354
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	247306	326149	78	0.2517
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	327559	29951413	21554	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	29952013	29957246	7	-1.3593
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	29958175	31394284	675	0.022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	31394510	31404430	9	-1.4846
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	31417903	32560907	508	-0.0206
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	32562253	32562501	2	-1.2688
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	32564661	32794174	100	-0.08
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	32796593	32798005	8	0.4872
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	32798775	32798808	3	1.5183
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	32798923	49038824	10377	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	49039688	49043159	5	-0.7703
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	49054522	54039026	3318	-0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	54039043	54039814	8	-0.8668
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	54043307	74648586	10523	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	74648953	74658138	10	0.8439
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	74660283	77071668	1470	0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	77073620	77073646	3	-0.949
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	77073713	77496587	297	-0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	77496767	77509476	20	0.3348
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	77517792	79028431	982	0.02
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	79028500	79102621	114	0.3
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	79103380	81334706	1424	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	81340908	81346253	33	-0.746
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	81351060	103841522	14027	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	103844669	103868754	46	0.6375
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	103872163	134307961	19091	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	134310764	134311325	2	-1.8153
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	134313765	143912118	6164	0.008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	143912881	143914290	4	-0.9725
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	143915840	153876818	6930	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	153877747	153882663	4	-1.5716
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	6	153887015	170892930	12056	-0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	7	52911	54347867	38578	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	7	54353999	54354011	6	1.4125
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	7	54360982	66266675	3889	-0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	7	66266764	66281939	7	-1.3389
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	7	66282667	70058374	2400	-0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	7	70061186	70064077	2	-2.5081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	7	70066179	72041747	1193	-0.011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	7	72044258	72340098	28	-0.3284
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	7	72361319	84778722	6872	-0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	7	84781480	84786416	4	-1.3436
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	7	84791543	100867643	9343	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	7	100868518	100868706	2	-1.2416
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	7	100872978	133435735	19861	-0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	7	133435751	133446205	25	0.5821
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	7	133446244	141409163	5208	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	7	141409593	141438576	43	-0.4971
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	7	141441750	142154515	451	0.0253
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	7	142156294	142165914	29	0.8267
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	7	142176424	142933203	471	0.0201
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	7	142933890	143029152	30	-0.2436
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	7	143039363	143608325	361	-0.0167
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	7	143623463	143640497	7	-0.7428
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	7	143645122	152778571	5592	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	7	152778578	152778645	2	-2.638
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	7	152778648	155156790	1786	-0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	7	155158624	155159699	2	1.473
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	7	155162397	158819765	2327	-0.016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	21254	583041	327	-0.0099
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	584944	585908	10	1.3865
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	591043	1347537	531	-0.0127
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	1347729	1348109	9	-0.5492
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	1348141	2068619	612	-0.024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	2068658	2068779	3	-1.7057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	2068814	7181231	6343	-0.0145
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	7202021	7225429	24	-0.4571
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	7237790	7781474	112	0.589
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	7783389	7785109	4	-0.5142
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	7789458	7836800	33	0.5698
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	7847301	8015581	46	-0.1101
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	8015597	8129435	24	0.3838
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	8130592	8423207	286	-0.0192
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	8423560	8423852	4	-2.3064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	8425717	11932654	2933	-0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	11972069	12483262	119	0.4269
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	12487426	13854490	1303	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	13854600	13859608	5	-0.8247
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	13859706	14329582	430	-0.011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	14330561	14330691	3	-1.3293
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	14330923	25028104	8688	0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	25030360	25040250	27	0.6443
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	25047021	40891153	10167	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	40897009	40897628	2	-1.9353
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	40902837	112360670	40989	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	112363455	112364436	10	1.259
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	112369457	144770076	22420	-6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	144770300	144778951	10	-0.7061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	8	144790132	146268959	506	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	9	36587	78960218	38413	0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	9	78960330	78967224	28	0.5379
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	9	78975948	89712414	7703	0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	9	89743971	89744039	2	-1.8272
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	9	89747777	137351189	32677	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	9	137353926	137355443	2	-1.615
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	9	137356233	139372768	700	-0.021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	9	139375463	139375539	2	-1.6221
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	9	139375654	140211215	414	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	62759	4230107	3539	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	4230722	4231572	4	-1.2964
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	4233998	13090011	7398	-0.0058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	13090029	13090176	4	-0.7713
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	13090434	17876598	3938	-0.0094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	17899449	17989863	7	0.6303
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	18011822	18282310	27	-0.3989
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	18282641	24415269	4333	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	24417680	24418060	11	-1.9641
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	24418914	46094186	12331	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	46111165	46457573	76	0.6785
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	46461472	46488233	35	0.3103
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	46488249	46562313	54	0.848
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	46562328	47241036	204	0.518
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	47417400	47433407	3	-1.3089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	47468066	48356772	291	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	48391956	49033015	32	0.5459
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	49051617	52869480	2337	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	52869625	52870282	2	-1.1106
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	52871255	56115622	2595	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	56122955	56138443	13	0.6284
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	56142270	58182861	1362	-0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	58186381	58196843	41	-0.6954
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	58202758	61034121	2082	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	61034136	61035270	7	-0.858
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	61035488	64179397	2240	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	64183554	64188158	2	-0.9864
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	64188198	66977942	1788	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	66977957	66984452	26	0.4155
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	66992801	81053891	9253	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	81055405	81184196	8	-0.8165
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	81229407	81452221	13	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	81486935	81487784	2	-1.7341
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	81497207	89102609	5223	0.0075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	89102873	89107280	2	1.6122
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	10	89121170	135356694	31823	-0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	11	188510	3214087	1256	-0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	11	3214219	3214237	2	-1.1427
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	11	3214412	4924226	1220	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	11	4924693	4932965	34	0.6592
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	11	4933069	5746445	800	0.0134
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	11	5747388	5764952	24	0.4994
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	11	5765624	18897446	9426	0.0076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	11	18905648	18917754	40	-1.1749
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	11	18917857	18918564	17	-0.3357
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	11	18918592	38195060	14140	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	11	38196279	38198711	3	-1.1595
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	11	38207498	55132599	7712	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	11	55132812	55198894	43	0.4629
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	11	55200787	81181116	14631	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	11	81181640	81194806	10	-0.738
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	11	81200280	85983465	3181	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	11	85983523	85983702	3	-3.307
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	11	85992822	124580498	27043	0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	11	124580511	124588914	30	-0.9424
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	11	124593480	134107001	7269	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	11	134107490	134114776	8	-0.6837
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	11	134115152	134449982	277	0.0121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	12	20703	9521823	6203	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	12	9525137	9619559	24	-1.5406
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	12	9626236	19358279	6639	0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	12	19366037	19471771	53	0.5588
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	12	19472571	22304904	1962	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	12	22306770	22306800	2	-1.1644
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	12	22307096	22473706	111	0.0167
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	12	22485490	22489234	3	-1.0639
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	12	22495270	44186092	13535	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	12	44190705	44195804	4	1.8432
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	12	44199559	132288262	56558	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	13	17924949	21382207	2015	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	13	21382411	21382460	2	1.4278
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	13	21382841	22530678	883	0.0073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	13	22530860	22531515	11	-0.5309
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	13	22536195	36969135	10657	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	13	36970036	36982757	16	-2.3177
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	13	36986330	114126499	50741	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	14	18072124	18627041	40	-0.0399
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	14	18632139	19493212	148	-0.4878
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	14	19494766	73070876	34154	0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	14	73076460	73087291	7	-1.1839
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	14	73090732	105867742	20943	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	14	105872400	105892781	8	0.7497
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	14	105896961	105983406	66	0.1066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	14	105983421	105989139	13	0.3921
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	14	105989153	106356482	225	0.049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	15	18276341	19535709	299	0.0526
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	15	19537879	19864595	34	-0.5969
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	15	19874434	19884565	7	0.1391
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	15	19886365	20088838	81	-0.6287
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	15	20224763	32791253	7601	0.0087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	15	32793503	32794016	6	-0.9413
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	15	32795968	43147386	6156	-0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	15	43154816	43155141	2	-2.4764
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	15	43157816	50049903	4277	-0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	15	50053027	50060576	5	-1.0466
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	15	50062547	51982281	1390	0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	15	51987642	51989791	3	-1.2116
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	15	51991520	59601176	5475	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	15	59604014	59604508	3	-1.2253
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	15	59605224	74665417	9021	-0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	15	74678296	74682830	22	-1.9037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	15	74689234	85619879	6719	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	15	85631534	85671505	40	-0.988
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	15	85671737	95609413	7488	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	15	95618796	95633191	11	-0.82
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	15	95634653	97524414	1408	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	15	97527904	97556571	18	0.538
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	15	97560036	100286563	2008	-0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	16	777	50870	25	0.279
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	16	54026	5547891	2605	-0.0124
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	16	5548090	5548152	2	-1.5203
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	16	5548338	6165028	730	-0.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	16	6171253	6171877	3	-1.0885
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	16	6171960	14846841	7768	-0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	16	14859076	14961382	29	-0.2447
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	16	14961689	14961859	4	0.5645
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	16	14965859	15035487	41	-0.2502
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	16	15037406	19851864	2328	-0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	16	19853151	19874863	29	-3.0858
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	16	19877755	21297471	905	-0.0146
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	16	21319904	21527907	37	-0.2929
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	16	21528048	22349475	351	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	16	22349521	22611363	72	-0.3166
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	16	22612021	23650840	658	-0.0115
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	16	23659147	23659532	3	-0.9437
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	16	23659595	31947984	4496	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	16	31948315	32496122	83	0.3552
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	16	32496123	32496410	6	0.9872
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	16	32516775	32785830	51	0.3138
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	16	32785836	33004923	24	0.0181
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	16	33009105	33539331	91	0.4017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	16	33550900	54354095	6993	-0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	16	54355723	54379945	18	0.9152
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	16	54387058	86661592	24323	-0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	16	86661807	86674516	10	-0.5169
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	16	86674531	88815036	841	-0.0258
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	17	526	16595026	10508	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	17	16598056	16682509	16	-0.3869
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	17	16697872	18260587	918	0.0094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	17	18296117	18405946	29	0.7084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	17	18409922	41518916	12043	-0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	17	41521621	41718140	124	0.3832
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	17	41719947	42120174	50	-0.4804
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	17	42139835	44555067	1241	-0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	17	44562699	44582048	26	-1.0211
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	17	44584497	78643088	20348	-0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	18	1543	4690983	3375	0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	18	4695870	4699510	4	-1.1546
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	18	4700695	36512725	19467	-8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	18	36514418	36519387	19	0.4339
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	18	36522022	49520859	8977	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	18	49521095	49521390	6	0.7649
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	18	49522182	61351446	8149	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	18	61351459	61358237	22	0.9027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	18	61358253	61715545	242	-0.0128
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	18	61716015	61716853	6	-0.6584
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	18	61719124	61872559	110	-0.0152
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	18	61878472	61879320	12	-1.7893
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	18	61883718	76116029	10437	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	19	41910	60973882	27506	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	19	60974181	60974879	4	-1.2571
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	19	60978105	63789666	1847	-0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	20	9305	1508999	1206	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	20	1509580	1538257	37	1.3803
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	20	1538455	1541893	4	0.6171
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	20	1545946	62386512	41249	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	20	62425139	62426597	5	0.7855
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	21	9758742	46921385	24411	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	22	14432528	14741969	44	-0.1982
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	22	14745495	14766614	3	-1.1909
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	22	14766651	14857054	18	-0.3082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	22	14857516	15659113	168	-0.0089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	22	15664533	15668220	8	-1.1763
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	22	15679901	17112919	975	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	22	17128440	17128454	2	1.2607
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	22	17150421	18853346	934	-0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	22	18871884	18992706	3	1.2435
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	22	19035775	19925178	703	-0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	22	19937084	20038108	4	0.7246
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	22	20051603	20146560	20	0.0164
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	22	20146691	20170595	11	0.4039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	22	20170674	20624301	189	-0.0303
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	22	20627659	20628378	4	-0.874
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	22	20633413	20833523	296	-0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	22	20833549	20833653	3	-0.8425
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	22	20833853	21082462	263	-0.0184
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	22	21082680	21082880	4	-1.4081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	22	21087321	22613016	940	-0.0149
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	22	22613098	22618434	5	-1.0704
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	22	22618457	22660218	20	-0.1282
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	22	22660269	22662933	4	-1.9577
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	22	22667307	22674422	3	0.0257
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	22	22680529	22726814	19	0.658
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	22	22731529	49581321	18917	-0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	X	108477	28194391	17353	-0.008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	X	28194922	28196434	2	-1.7007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	X	28196613	149293064	64315	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	X	149294747	149300617	12	-1.0655
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	X	149311557	150043556	511	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	X	150044592	150046117	2	0.9749
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	X	150047213	151012799	696	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	X	151016276	151023920	4	-1.2874
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	X	151023987	154835548	1731	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	Y	2710438	6161425	839	-2.6919
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	Y	6167901	6489434	131	-3.8609
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	Y	6498630	7459842	416	-3.0221
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	Y	7460746	10433373	1220	-3.3486
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	Y	10436040	14099670	933	-3.0749
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	Y	14099736	14103917	3	-7.6439
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	Y	14104283	17543786	1822	-3.1948
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	Y	17547696	17807379	113	-3.7329
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	Y	17809644	18080026	142	-3.0717
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	Y	18080874	19547685	705	-3.7233
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	Y	19547873	22268551	1052	-3.1944
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	Y	22268856	22769319	112	-3.7403
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	Y	22770660	22925190	80	-3.0804
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	Y	22925469	24840062	375	-3.7572
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	Y	24840296	24878447	17	-2.1157
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	Y	24883344	24919963	9	-2.8318
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	Y	24920187	25846090	96	-4.1325
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	Y	25854303	25938472	33	-2.6484
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	Y	25944418	26009711	21	-3.9795
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	Y	26011215	26127308	34	-2.659
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	Y	26127580	26833326	254	-3.7951
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F08_896558	Y	26847504	57427647	183	-2.8409
