Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	51598	16693206	8722	0.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	16701089	17134834	174	-0.3845
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	17148828	72541504	34077	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	72541524	72583736	45	-0.8689
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	72584492	83613577	7118	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	83622946	83622978	2	2.5427
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	83626239	110029038	16610	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	110034497	110041701	17	1.341
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	110044476	112497796	1962	0.0195
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	112497831	112507479	22	0.6628
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	112507583	120888538	5122	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	120888902	120894018	2	1.8663
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	120895123	143661332	197	-0.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	143669045	143818670	58	-0.3724
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	143819010	151023398	2864	0.0246
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	151023430	151035324	40	0.6508
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	151040529	247191011	65605	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	2	2784	44510128	31446	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	2	44513943	44514588	2	-2.4408
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	2	44516656	134772954	52107	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	2	134773145	134773340	2	3.0562
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	2	134774727	146580899	7329	0.0073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	2	146580913	146583404	22	0.8293
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	2	146594276	164345098	10600	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	2	164351734	164352781	4	-1.4643
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	2	164353372	180126578	9917	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	2	180126633	180138314	32	-0.8143
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	2	180138576	242738129	38592	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	35345	199602	156	0.0476
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	205022	207800	4	-3.1677
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	209877	1468952	1086	-0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	1469264	1471493	4	1.5545
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	1471821	100427148	62591	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	100427166	100432004	36	0.5751
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	100432111	152917638	32341	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	152921492	152925327	4	-1.2858
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	152925413	163699715	6546	0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	163701038	163701579	8	1.2677
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	163701706	199380515	22184	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	2281	764617	325	-0.0516
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	766911	772301	3	1.7205
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	783931	9819488	5473	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	9823258	9843364	31	0.4553
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	9843706	9849811	11	-0.107
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	9853711	9854053	2	2.5775
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	9854996	34455399	16986	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	34455420	34495505	37	0.6646
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	34495606	66280828	17835	0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	66282751	66312345	38	0.5373
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	66312360	69057536	1626	0.0175
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	69057550	69057755	2	1.8747
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	69057943	69475459	74	-0.0984
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	69477123	69485755	2	3.5318
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	69512426	104965020	21415	-0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	104971079	104973050	8	1.1711
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	104973186	108287747	1874	0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	108287767	108291337	7	1.2863
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	108292956	153011087	26603	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	153011104	153011996	9	-1.0961
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	153012017	156021998	1955	-0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	156022455	156022528	3	-2.7516
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	156022649	173224503	11026	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	173225723	173237396	16	0.8021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	173238406	179830805	4032	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	179830890	179831559	2	1.9071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	179831764	183967644	3219	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	183968731	183968738	2	2.4822
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	183972256	191261904	4864	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	5	68532	155415307	96300	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	5	155427828	155427837	4	1.5681
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	5	155433570	173139959	12422	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	5	173141214	173141492	2	2.6336
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	5	173141606	180722926	4408	0.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	94661	2549644	2024	-0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	2549719	2550197	2	-2.2966
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	2553795	19152681	12773	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	19152695	19152727	2	1.9082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	19152742	23165616	2928	-0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	23168970	23168978	3	-1.4308
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	23172233	26826110	2539	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	26836619	26866009	20	-0.4962
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	26870366	29958359	1466	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	29979615	30024465	24	-1.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	30024484	31394255	646	0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	31394284	31395201	4	-1.9768
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	31395480	32560907	514	0.0316
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	32562253	32682359	37	0.8984
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	32686060	32794174	65	0.1089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	32796593	32798005	8	0.6002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	32798775	32798808	3	2.2727
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	32798923	34232391	889	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	34233259	34246067	9	0.801
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	34246280	62098487	15433	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	62098523	62100212	2	1.7317
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	62100344	69710480	4723	0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	69713776	69717962	2	2.3053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	69719088	74648586	3169	-5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	74648953	74658138	10	0.7904
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	74660283	77084501	1504	0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	77089673	77089929	3	1.0975
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	77090104	77493251	262	0.0115
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	77496587	77509101	15	-0.6828
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	77509111	95309939	11519	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	95310572	95310575	2	1.9164
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	95313484	103834918	5051	0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	103837186	103868754	54	0.6618
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	103872163	170892930	44251	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	52911	54347867	38578	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	54353999	54354011	6	-1.8599
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	54360982	63288733	2658	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	63289280	63295196	2	2.8323
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	63299591	91195790	15737	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	91195805	91196707	5	1.31
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	91196725	118907510	16289	-0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	118907598	118937357	19	0.5208
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	118938331	125832159	4166	-0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	125832210	125833851	13	0.9798
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	125834112	125856083	24	-0.0368
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	125857178	125857447	2	1.8076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	125863219	133435735	4681	0.0089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	133435751	133449098	32	0.4626
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	133449386	140646833	4709	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	140649021	140650935	5	1.1847
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	140652473	142156294	980	0.0135
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	142156339	142159298	7	-3.277
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	142159383	142165614	19	-1.4667
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	142165684	158819765	10580	-0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	8	21254	40302954	31553	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	8	40302956	40308668	33	-0.7138
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	8	40312067	40891153	452	0.0099
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	8	40897009	40897628	2	-1.807
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	8	40902837	58505888	8283	-0.0095
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	8	58506586	58506995	2	1.7392
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	8	58509144	65010273	4296	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	8	65010585	65011466	9	0.8791
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	8	65011511	107317406	25333	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	8	107317922	107318609	2	2.2705
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	8	107318735	146268959	26004	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	36587	22482889	19877	0.0118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	22491913	22492699	2	-3.5034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	22499340	29081097	4928	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	29084549	29084997	2	-2.3836
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	29087680	32104161	2129	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	32104282	32104291	2	1.7663
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	32104306	38761787	4246	-0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	38761831	38777493	2	2.5169
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	38786107	44191224	268	0.0533
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	44195483	44195882	2	2.1796
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	44199159	86457198	12254	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	86457519	86457613	2	1.834
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	86464568	92649184	4458	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	92649398	92649953	4	1.42
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	92652780	94320708	1179	-0.0125
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	94324803	94331730	2	1.4651
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	94332047	97834633	2300	0.0069
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	97839794	97839869	2	-1.9795
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	97846336	134940716	25849	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	134942217	134947261	6	1.145
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	134955483	137156961	1166	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	137157017	137163414	2	1.9199
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	137163836	140211215	1249	0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	10	62759	4280814	3587	0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	10	4280838	4280924	2	2.4942
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	10	4281016	135356694	87504	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	188510	25175687	17778	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	25175721	25177588	2	2.4928
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	25180829	48886497	15756	0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	48886708	48886904	2	2.6251
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	48921309	55133087	1131	0.0581
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	55133210	55191703	34	-0.4888
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	55194295	80962410	14444	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	80962562	80968833	8	1.0502
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	80969022	84164365	2132	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	84164651	84170883	2	2.4396
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	84171525	91470137	4813	-0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	91470306	91470691	2	2.9564
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	91472352	104283850	9477	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	104283899	104286109	4	1.2166
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	104286244	107163263	1923	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	107164234	107164450	2	2.2606
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	107167953	134449982	19648	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	20703	9351801	6123	0.0161
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	9352495	9363910	4	-1.6912
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	9364424	9525137	80	-0.0561
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	9529176	9619559	23	-1.3868
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	9626236	31171857	15260	0.0098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	31172513	31293957	85	0.4428
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	31298076	33193074	1314	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	33193280	33198345	19	-0.7823
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	33198641	41534170	4025	0.0224
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	41534384	41535152	3	1.7825
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	41536624	89007481	28893	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	89015800	89016205	7	-1.3845
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	89017688	126969708	25388	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	126970202	126972205	2	2.2041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	126972272	129010806	1875	0.0284
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	129013417	129016515	3	1.8541
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	129018884	132288262	1993	0.0089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	13	17924949	36970224	13571	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	13	36973904	36986387	17	0.6767
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	13	36986609	56649097	12539	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	13	56656271	56687715	35	-0.4158
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	13	56688010	114126499	38155	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	14	18072124	18240412	17	-0.045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	14	18241044	19493212	173	0.3903
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	14	19494766	36405339	11022	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	14	36405621	36406386	4	1.6194
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	14	36406723	45879032	5606	0.0118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	14	45881685	45882211	2	2.0079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	14	45882488	85354507	25689	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	14	85356065	85381926	15	-1.0417
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	14	85385888	105811819	12726	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	14	105817770	105824912	8	1.0374
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	14	105825048	105867070	16	0.0079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	14	105867273	105873098	6	-1.5709
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	14	105886988	106356482	308	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	18276341	19466192	289	-0.0258
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	19466193	19943111	75	0.3402
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	19945757	21909391	919	0.0092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	21909709	21985625	45	0.4443
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	21993312	32501415	6490	0.0101
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	32507087	32576616	55	-0.628
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	32576628	32715778	66	-0.0455
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	32716087	32765105	59	-0.7931
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	32772283	62615260	19382	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	62616834	62616883	2	-3.6725
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	62617722	74665417	6976	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	74678296	74682830	22	0.8942
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	74689234	91895251	11443	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	91895586	91896640	2	2.2681
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	91898071	100192957	6223	0.0128
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	100205877	100210760	5	1.6172
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	100212902	100286563	20	-0.0427
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	16	777	6952473	4344	0.0197
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	16	6953201	6953569	2	2.4562
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	16	6955771	18089485	8455	0.0196
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	16	18106218	18539857	24	0.6937
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	16	18540917	54354011	14502	0.0094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	16	54354076	54379945	20	1.0779
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	16	54387058	54431487	20	-0.3621
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	16	54433347	61990636	4778	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	16	61991951	61992722	3	1.8649
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	16	61993809	62652995	456	-0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	16	62653314	62654228	2	1.8224
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	16	62654543	69518491	3866	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	16	69518615	69529634	7	-1.389
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	16	69531611	88815036	16031	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	17	526	611794	337	0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	17	613993	614127	2	2.3923
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	17	625241	16595026	10169	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	17	16598056	16682253	15	-0.7543
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	17	16682509	18299671	921	-0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	17	18299674	18399997	25	0.7258
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	17	18405311	29350690	5416	0.0106
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	17	29351076	29353806	2	2.0408
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	17	29356799	36675234	4089	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	17	36676540	36683976	23	1.4283
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	17	36684057	78643088	24301	0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	18	1543	36512185	22833	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	18	36512234	36512401	4	1.8496
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	18	36512481	54247495	12066	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	18	54247758	54250387	2	2.4429
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	18	54250472	76116029	15913	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	19	41910	318089	75	-0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	19	327382	339950	4	1.4653
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	19	340805	15645152	6552	0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	19	15651085	15652617	2	2.4513
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	19	15652664	63789666	22714	0.0131
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	20	9305	15249374	11647	0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	20	15249902	15250374	3	-2.2241
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	20	15253258	52078275	23354	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	20	52081215	52086300	16	-0.6961
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	20	52086345	52086643	6	0.4738
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	20	52087236	52092058	16	-1.0619
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	20	52095981	53061637	858	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	20	53061781	53064870	2	2.2493
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	20	53064986	62426597	6597	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	21	9758742	43792481	22641	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	21	43795301	43797240	2	-2.8096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	21	43798095	46921385	1767	0.0188
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	22	14432528	19790417	2827	-0.0185
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	22	19790431	19790719	6	1.2824
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	22	19791017	49581321	20726	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	X	108477	9538063	5307	-0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	X	9538198	9538745	2	-3.8597
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	X	9541229	24505257	9721	0.011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	X	24505335	24505668	4	-3.1856
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	X	24507870	43498131	11800	0.0123
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	X	43505580	43506243	2	-6.1733
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	X	43506353	137400336	46780	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	X	137400394	137400511	2	5.2634
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	X	137400671	154038350	10601	0.0154
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	X	154045576	154071488	11	-1.5622
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	X	154085447	154835548	229	0.0401
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	Y	2710438	57427647	8589	-0.8656
