Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	61735	16820619	8722	0.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	16828502	17262247	174	-0.3845
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	17276241	72768916	34153	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	72768936	72811148	45	-0.8689
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	72811904	83840989	7113	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	83850358	83850390	2	2.5427
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	83853651	110227515	16606	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	110232974	110240178	17	1.341
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	110242953	112696273	1962	0.0195
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	112696308	112705956	22	0.6628
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	112706060	121187015	5120	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	121187379	121192495	2	1.8663
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	121193600	144949975	195	-0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	144957688	145107313	58	-0.3724
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	145107653	152756774	2865	0.0243
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	152756806	152768700	40	0.6508
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	152773905	249224388	65602	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	2	12784	44656624	31442	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	2	44660439	44661084	2	-2.4408
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	2	44663152	135056484	52097	0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	2	135056675	135056870	2	3.0562
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	2	135058257	146864429	7328	0.0073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	2	146864443	146866934	22	0.8293
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	2	146877806	164636852	10600	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	2	164643488	164644535	4	-1.4643
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	2	164645126	180418333	9917	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	2	180418388	180430069	32	-0.8143
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	2	180430331	243089456	38595	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	60345	224602	156	0.0476
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	230022	232800	4	-3.1677
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	234877	1493952	1085	-0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	1494264	1496493	4	1.5545
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	1496821	98944458	62585	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	98944476	98949314	36	0.5751
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	98949421	151434948	32341	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	151438802	151442637	4	-1.2858
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	151442723	162217021	6545	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	162218344	162218885	8	1.2677
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	162219012	197896118	22185	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	12281	774617	325	-0.0516
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	776911	782301	3	1.7205
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	793931	10210390	5473	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	10214160	10234266	31	0.4553
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	10234608	10240713	11	-0.107
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	10244613	10244955	2	2.5775
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	10245898	34779004	16986	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	34779025	34819110	37	0.6646
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	34819211	66598233	17832	0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	66600156	66629750	38	0.5373
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	66629765	69323519	1620	0.0167
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	69325183	69333814	3	2.307
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	69334141	69375160	11	0.4968
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	69375348	104745571	21491	-0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	104751630	104753601	8	1.1711
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	104753737	108068298	1874	0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	108068318	108071888	7	1.2863
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	108073507	152791637	26607	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	152791654	152792546	9	-1.0961
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	152792567	155802548	1955	-0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	155803005	155803078	3	-2.7516
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	155803199	172987928	11026	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	172989148	173000821	16	0.8021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	173001831	179593811	4032	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	179593896	179594565	2	1.9071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	179594770	183730650	3219	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	183731737	183731744	2	2.4822
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	183735262	191027923	4863	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	5	15532	155482729	96299	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	5	155495250	155495259	4	1.5681
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	5	155500992	173207353	12423	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	5	173208608	173208886	2	2.6336
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	5	173209000	180790320	4409	0.0112
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	149661	2604645	2024	-0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	2604720	2605198	2	-2.2966
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	2608796	19044702	12772	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	19044716	19044748	2	1.9082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	19044763	23057637	2928	-0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	23060991	23060999	3	-1.4308
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	23064254	26718131	2539	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	26728640	26758030	20	-0.4962
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	26762387	29850380	1466	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	29871636	29916486	24	-1.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	29916505	31286276	646	0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	31286305	31287222	4	-1.9768
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	31287501	32452929	514	0.0316
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	32454275	32574381	37	0.8984
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	32578082	32686196	67	0.1003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	32688615	32690027	8	0.6002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	32690797	32690830	3	2.2727
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	32692227	34124413	887	-5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	34125281	34138089	9	0.801
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	34138302	62040528	15435	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	62040564	62042253	2	1.7317
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	62042385	69653759	4723	0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	69657055	69661241	2	2.3053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	69662367	74591858	3168	-6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	74592225	74601410	10	0.7904
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	74603555	77027781	1504	0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	77032953	77033209	3	1.0975
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	77033384	77436532	262	0.0115
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	77439868	77452382	15	-0.6828
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	77452392	95253218	11518	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	95253851	95253854	2	1.9164
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	95256763	103728225	5051	0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	103730493	103762061	54	0.6618
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	103765470	171051005	44258	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	43355	54380373	38574	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	54386505	54386517	6	-1.8599
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	54393488	63651298	2658	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	63651845	63657761	2	2.8323
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	63662156	91357854	15740	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	91357869	91358771	5	1.31
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	91358789	119120274	16293	-0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	119120362	119150121	19	0.5208
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	119151095	126044923	4166	-0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	126044974	126046615	13	0.9798
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	126046876	126068847	24	-0.0368
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	126069942	126070211	2	1.8076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	126075983	133785195	4682	0.0089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	133785211	133798558	32	0.4626
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	133798846	141000364	4709	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	141002552	141004466	5	1.1847
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	141006004	142476719	980	0.0143
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	142476764	142479722	7	-3.277
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	142479807	142486045	19	-1.447
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	142486115	159127004	10579	-0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	8	31254	40183797	31554	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	8	40183799	40189511	33	-0.7138
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	8	40192910	40771996	452	0.0099
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	8	40777852	40778471	2	-1.807
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	8	40783680	58343334	8282	-0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	8	58344032	58344441	2	1.7392
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	8	58346590	64847719	4298	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	8	64848031	64848912	9	0.8791
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	8	64848957	107248230	25334	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	8	107248746	107249433	2	2.2705
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	8	107249559	146298155	26008	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	46587	22492889	19881	0.0116
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	22501913	22502699	2	-3.5034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	22509340	29091097	4927	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	29094549	29094997	2	-2.3836
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	29097680	32114161	2131	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	32114282	32114291	2	1.7663
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	32114306	38771787	4249	-0.0076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	38771831	38787493	2	2.5169
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	38796107	44251228	268	0.0533
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	44255487	44255886	2	2.1796
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	44259163	87267378	12256	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	87267699	87267793	2	1.834
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	87274748	93609363	4458	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	93609577	93610132	4	1.42
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	93612959	98794812	3482	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	98799973	98800048	2	-1.9795
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	98806515	135950895	25853	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	135952396	135957440	6	1.145
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	135965662	138017140	1166	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	138017196	138023593	2	1.9199
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	138024015	141091394	1249	0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	10	72759	4290814	3587	0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	10	4290838	4290924	2	2.4942
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	10	4291016	135506704	87501	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	198510	25219111	17776	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	25219145	25221012	2	2.4928
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	25224253	48929921	15754	0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	48930132	48930328	2	2.6251
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	48964733	55376511	1131	0.0581
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	55376634	55435127	34	-0.4888
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	55437719	81284762	14444	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	81284914	81291185	8	1.0502
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	81291374	84486717	2132	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	84487003	84493235	2	2.4396
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	84493877	91830489	4812	-0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	91830658	91831043	2	2.9564
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	91832704	104778640	9474	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	104778689	104780899	4	1.2166
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	104781034	107658053	1922	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	107659024	107659240	2	2.2606
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	107662743	134944770	19646	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	150442	9460534	6122	0.0162
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	9461228	9472643	4	-1.6912
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	9473157	9633870	80	-0.0561
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	9637909	9713674	21	-1.4393
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	9714954	31282460	15261	0.0097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	31282547	31402690	83	0.4418
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	31406809	33301807	1314	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	33302013	33307078	19	-0.7823
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	33307374	43247903	4024	0.0224
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	43248117	43248885	3	1.7825
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	43250357	90483350	28892	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	90491669	90492074	7	-1.3845
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	90493557	128403755	25386	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	128404249	128406252	2	2.2041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	128406319	130444853	1875	0.0284
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	130447464	130450562	3	1.8541
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	130452931	133778189	1993	0.0089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	13	19026949	38072224	13569	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	13	38075904	38088387	17	0.6767
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	13	38088609	57751096	12539	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	13	57758270	57789714	35	-0.4158
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	13	57790009	115108397	38153	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	14	19002124	19170412	17	-0.045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	14	19171044	20423372	173	0.3903
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	14	20424926	37335588	11021	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	14	37335870	37336635	4	1.6194
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	14	37336972	86284754	31295	0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	14	86286312	86312173	15	-1.0417
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	14	86316135	106740774	12726	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	14	106746725	106753867	8	1.0374
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	14	106754003	106796025	16	0.0079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	14	106796228	106802053	6	-1.5709
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	14	106815943	107285437	308	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	20016328	24358298	1283	0.0207
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	24358616	24434532	45	0.4443
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	24442219	34714123	6491	0.0101
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	34719795	34789324	55	-0.628
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	34789336	34928486	66	-0.0455
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	34928795	34977813	59	-0.7931
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	34984991	64828207	19379	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	64829781	64829830	2	-3.6725
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	64830669	76878362	6976	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	76891241	76895775	22	0.8942
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	76902179	94094247	11443	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	94094582	94095636	2	2.2681
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	94097067	102375434	6222	0.0128
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	102388354	102393237	5	1.6172
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	102395379	102469040	20	-0.0427
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	16	60777	7012472	4343	0.0198
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	16	7013200	7013568	2	2.4562
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	16	7015770	18181984	8455	0.0196
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	16	18198717	18632356	24	0.6937
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	16	18633416	55796510	14501	0.0094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	16	55796575	55822444	20	1.0779
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	16	55829557	90287535	25086	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	17	526	665044	337	0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	17	667243	667377	2	2.3923
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	17	678491	16654301	10170	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	17	16657331	16741528	15	-0.7543
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	17	16741784	18358946	921	-0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	17	18358949	18459272	25	0.7258
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	17	18464586	39421708	9505	0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	17	39423014	39430450	23	1.4283
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	17	39430531	81049726	24302	0.0069
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	18	11543	38258187	22832	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	18	38258236	38258403	4	1.8496
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	18	38258483	56096515	12065	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	18	56096778	56099407	2	2.4429
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	18	56099492	78015057	15912	0.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	19	90910	367089	75	-0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	19	376382	388950	4	1.4653
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	19	389805	15784152	6552	0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	19	15790085	15791617	2	2.4513
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	19	15791664	59097854	22713	0.0131
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	20	61305	15301374	11650	0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	20	15301902	15302374	3	-2.2241
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	20	15305258	52644868	23354	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	20	52647808	52652893	16	-0.6961
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	20	52652938	52653236	6	0.4738
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	20	52653829	52658651	16	-1.0619
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	20	52662574	53628230	858	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	20	53628374	53631463	2	2.2493
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	20	53631579	62956153	6597	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	21	10736871	44968053	22641	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	21	44970873	44972812	2	-2.8096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	21	44973667	48096957	1766	0.0188
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	22	16052528	21460417	2827	-0.0185
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	22	21460431	21460719	6	1.2824
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	22	21461017	51234455	20726	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	X	168477	9578063	5308	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	X	9578198	9578745	2	-3.8597
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	X	9581229	24595336	9722	0.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	X	24595414	24595747	4	-3.1856
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	X	24597949	43613187	11800	0.0123
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	X	43620636	43621299	2	-6.1733
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	X	43621409	69336885	10179	0.0115
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	X	69337855	69346120	4	-2.8465
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	X	69347311	137572670	36587	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	X	137572728	137572845	2	5.2634
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	X	137573005	154385156	10596	0.0154
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	X	154392382	154418294	11	-1.5622
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	X	154432253	155182354	230	0.0392
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	Y	2650438	59018259	8634	-0.8668
