Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	3208470	245880329	129035	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	2	474222	229595247	123976	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	2	229595803	229602368	6	-0.8642
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	2	229605276	242124735	7249	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	526235	27784793	14905	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	27787379	27789515	7	-0.955
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	27792023	152917638	67964	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	152921492	152925327	4	-1.2858
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	152925413	199023074	23468	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	1043934	189836143	102693	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	5	967233	180293075	100467	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	959281	135377122	75311	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	135383947	135384931	2	-1.5172
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	135391263	170745844	21121	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	671810	158077879	81289	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	8	607667	145304484	81504	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	779932	140058573	67997	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	10	405240	135075077	80832	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	446120	78183659	41210	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	78185209	78187581	5	-1.1037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	78187645	133647740	36014	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	760163	131671419	73928	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	13	18348806	114005560	56626	-0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	14	19571208	105059083	49423	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	21238778	49323433	14224	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	49325572	49326625	3	-1.2046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	49328952	62615260	8952	-0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	62616834	62616883	2	-3.6725
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	62617722	99701830	21337	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	16	593460	87907437	40844	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	17	933971	78510305	36975	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	18	319586	60645365	35519	-0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	18	60645472	60647495	2	-1.5742
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	18	60649922	75210228	7122	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	19	235018	63570038	23936	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	20	403764	61690281	37272	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	21	14269492	46503202	20577	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	22	15803930	47717016	16916	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	X	3167107	154558783	63648	0.0132
