Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	1	3218610	247813706	129089	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	2	484222	229887003	123968	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	2	229887559	229894124	6	-0.8642
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	2	229897032	242476062	7249	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	2212571	27809789	14903	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	27812375	27814511	7	-0.955
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	27817019	151434948	67960	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	151438802	151442637	4	-1.2858
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	3	151442723	197538677	23467	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	4	1053934	188763651	102698	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	5	914233	180360469	100467	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	1014281	135335429	75318	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	135342254	135343238	2	-1.5172
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	6	135349570	170903919	21123	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	7	705284	158385118	81290	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	8	617667	145232496	81511	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	9	789932	140938752	68009	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	10	415240	22423302	15545	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	10	22426724	22427400	2	-1.3864
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	10	22428292	135225087	65283	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	456120	78506011	41207	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	78507561	78509933	5	-1.1037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	11	78509997	134142530	36007	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	12	889902	133161346	73923	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	13	19450806	114987458	56622	-0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	14	20501368	105988038	49421	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	23687685	51536141	14225	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	51538280	51539333	3	-1.2046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	51541660	64828207	8950	-0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	64829781	64829830	2	-3.6725
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	15	64830669	101884307	21336	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	16	653459	89379936	40780	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	17	987221	80917016	36975	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	18	329586	62494385	35517	-0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	18	62494492	62496515	2	-1.5742
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	18	62498942	77109240	7121	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	19	284018	58878226	23936	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	20	455764	62219837	37275	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	21	15347621	47678774	20576	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	22	17423930	49331012	16915	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F09_896526	X	3157107	154905589	63666	0.0133
