Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	61735	61808	2	-0.6457
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	61823	35091674	19163	-0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	35102654	35103036	6	-0.8119
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	35103142	35103864	6	-0.0292
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	35104043	35104491	8	-0.7991
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	35114268	41021036	3189	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	41022076	41028210	4	-1.4058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	41028926	46510353	3148	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	46512275	46513826	2	1.5893
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	46519553	55090200	4705	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	55093291	55094389	2	-1.4366
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	55096450	70962194	11646	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	70962476	70972133	10	-0.9572
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	70972147	72750353	1155	-0.006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	72756113	72763370	9	-0.9991
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	72768418	72811148	48	0.7011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	72811904	81888456	5786	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	81888602	81888605	2	1.4754
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	81888667	83840989	1326	0.0069
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	83850358	83850390	2	1.9082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	83853651	104157161	12967	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	104157317	104239986	21	0.4181
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	104256880	105622533	711	-0.0086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	105622940	105623553	2	1.3334
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	105626818	106013376	217	-0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	106019205	106022375	17	0.7252
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	106024055	111377368	3529	0.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	111377565	111378895	5	-2.2659
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	111379065	111379331	7	-3.877
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	111379339	111388226	26	-1.9997
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	111392067	112696273	1083	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	112696308	112705956	22	0.5955
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	112706060	148953996	6377	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	149024802	149291599	142	-0.54
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	149306068	152555527	1519	0.018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	152555706	152575461	24	-0.7358
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	152579449	166184481	9243	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	166184853	166185037	3	-1.1262
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	166186356	167764835	1196	0.0144
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	167766183	167766919	4	-0.9433
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	167768513	174797333	4652	0.0075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	174797385	174797448	2	1.5345
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	174797505	196709760	14668	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	196711067	196801850	94	0.4012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	1	196801987	249224388	35965	0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	2	12784	4205687	2988	-0.0112
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	2	4213864	4224019	42	-0.4901
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	2	4230062	34691069	21081	-0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	2	34699315	34740799	52	0.5322
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	2	34741027	35975973	872	-0.0318
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	2	35977790	35987916	6	-1.6183
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	2	35987947	243089456	125010	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	60345	65189235	45389	-0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	65189319	65210452	52	-0.5762
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	65216349	74436670	6746	0.0096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	74438119	74438314	2	-1.3312
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	74440269	75364480	536	0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	75366984	75367093	2	-1.9604
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	75369704	75421170	29	-0.0654
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	75427107	75620895	74	-0.7712
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	75638741	81595080	3409	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	81596092	81597307	3	-1.0502
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	81600797	89387101	4297	0.0154
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	89394592	89394742	8	-0.5952
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	89405100	89405117	4	0.2059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	89405754	89417287	36	-0.7882
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	89419364	97351824	2326	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	97354009	97356400	2	-1.3905
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	97359714	98937784	919	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	98944458	98949421	38	0.6292
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	98950964	108401146	5688	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	108401383	108407949	4	-1.2692
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	108408760	140542539	19849	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	140545701	140546984	2	-2.526
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	140560618	146474143	3711	-0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	146474323	146476483	3	-2.0812
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	146477052	162217021	9632	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	162218344	162218885	8	0.785
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	162219012	162513092	195	0.0187
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	162513149	162626572	68	1.0201
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	162626603	163662346	586	0.0256
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	163662371	163662917	6	-0.9351
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	163670448	189360754	16098	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	189363678	189371014	13	-0.7637
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	3	189372351	197896118	5222	-0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	4	12281	10210390	5804	-0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	4	10214160	10231498	29	-1.8536
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	4	10234214	27144761	12212	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	4	27148758	27161542	12	-0.6441
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	4	27162341	34779004	4776	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	4	34779025	34824725	41	0.6401
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	4	34829872	69372003	19500	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	4	69374941	69489335	66	0.537
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	4	69505115	104753601	21433	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	4	104753737	104761264	22	-0.7969
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	4	104762857	122281973	10658	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	4	122282468	122285135	28	-0.5723
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	4	122291131	172369346	30364	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	4	172374884	172377444	8	-1.0541
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	4	172377458	191027923	12538	-0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	5	15532	698505	310	-0.0565
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	5	717379	773568	26	0.8191
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	5	779860	12819313	9892	-0.0101
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	5	12819375	12820076	6	-1.6635
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	5	12824411	15720075	1985	-0.0081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	5	15720106	15720597	8	-0.8504
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	5	15723346	68846303	31015	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	5	68867294	69074977	2	2.5581
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	5	69074991	180790320	69907	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	6	149661	32452929	22941	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	6	32454275	32573771	33	1.6555
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	6	32574014	32690027	79	0.1437
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	6	32690797	32690830	3	2.421
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	6	32692227	48930865	10373	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	6	48931729	48935200	5	-0.8244
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	6	48946563	54842395	3929	-0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	6	54842495	54852112	7	-0.8667
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	6	54857207	74592225	9914	0.01
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	6	74592457	74597341	8	-2.5989
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	6	74601410	77014948	1469	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	6	77016900	77021978	9	0.5352
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	6	77023588	77421382	280	-0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	6	77421492	77452757	31	0.3333
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	6	77461073	78969105	980	0.0069
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	6	78971697	79041809	115	0.3276
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	6	79045902	103734829	15480	-5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	6	103737976	103762061	46	-1.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	6	103765470	142019294	24083	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	6	142025756	142032837	12	-1.0487
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	6	142034804	171051005	20160	-0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	7	43355	22434780	16103	-0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	7	22435472	22436487	2	-2.7031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	7	22438754	54386505	22467	0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	7	54386509	54386517	5	-2.1295
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	7	54393488	63651298	2659	0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	7	63651845	63657761	2	2.3644
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	7	63662156	66972705	1402	-0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	7	66973232	66973669	2	-1.633
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	7	66973920	126044923	34818	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	7	126044974	126046615	13	0.9335
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	7	126046876	133785177	4706	-0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	7	133785195	133790443	23	-1.6491
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	7	133795634	143226899	6203	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	7	143227096	143547272	95	0.4
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	7	143568059	150285104	4166	-0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	7	150285801	150301569	8	-1.2379
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	7	150307922	154389895	2587	-0.0151
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	7	154393171	154399613	4	1.0102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	7	154400830	155885038	1226	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	7	155886212	155887046	2	-1.3566
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	7	155888068	159127004	2019	-0.0151
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	8	31254	39230659	30904	-0.0075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	8	39235603	39384124	55	0.8904
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	8	39384700	144699157	64507	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	8	144705157	144705275	3	-1.0909
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	8	144706745	146298155	512	-0.0231
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	9	46587	7254800	6955	-0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	9	7255047	7260201	2	1.8459
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	9	7260390	10403105	3029	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	9	10404138	10404986	2	1.7187
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	9	10407943	22492889	9895	-0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	9	22501913	22502699	2	-3.4847
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	9	22509340	24500840	1383	0.0173
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	9	24503816	24517682	20	-0.7878
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	9	24519684	25668205	859	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	9	25668442	25672341	3	-1.9959
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	9	25675730	28303006	2096	-0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	9	28303017	28312061	8	0.8939
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	9	28316539	90522594	21894	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	9	90554151	90554219	2	-1.7452
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	9	90557957	96470097	3914	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	9	96470711	96470957	2	-2.3239
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	9	96472946	141091394	29884	-0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	10	72759	4290838	3588	-0.008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	10	4290924	4291016	2	2.8675
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	10	4294071	6411071	1832	-0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	10	6411215	6411481	6	1.1728
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	10	6418754	18083562	9468	0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	10	18106443	18199813	10	-0.9557
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	10	18223647	24375263	4341	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	10	24377674	24378054	11	-1.8585
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	10	24378908	58516403	19335	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	10	58516521	58526837	39	-0.6853
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	10	58532752	67306276	6116	0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	10	67307923	67314446	28	0.5185
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	10	67322795	68078212	616	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	10	68079173	68109338	30	-1.006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	10	68122532	81383874	8608	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	10	81383884	81559312	20	0.3746
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	10	81559401	84406448	1983	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	10	84410729	84435455	41	0.4723
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	10	84435884	90938673	4573	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	10	90942967	90950094	13	-0.9898
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	10	90950406	135506704	30438	-0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	11	198510	4262573	1797	-0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	11	4268620	4328172	19	-1.0697
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	11	4335878	4968510	664	0.0109
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	11	4970243	4976614	36	0.8844
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	11	4976814	83668182	48252	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	11	83668185	83670320	2	-2.4962
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	11	83670325	84486717	523	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	11	84487003	84493235	2	1.6223
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	11	84493877	91830489	4812	-0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	11	91830658	91831043	2	2.8513
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	11	91832704	101594384	7265	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	11	101597860	101597964	4	1.0924
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	11	101598212	111257235	6415	-0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	11	111257517	111259000	3	-1.3509
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	11	111259876	134944770	17359	-0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	12	150442	9630556	6206	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	12	9633870	9728292	25	-1.4796
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	12	9734969	33294660	16646	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	12	33301406	33307374	27	-0.5814
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	12	33308360	45904438	5623	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	12	45905840	45909537	3	1.9875
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	12	45913292	51806799	3184	0.0135
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	12	51808155	51808225	2	-1.4879
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	12	51808227	88228728	22782	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	12	88229715	88234604	3	1.0949
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	12	88235239	88715832	264	0.0279
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	12	88720496	88723350	3	0.8749
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	12	88724745	90483350	1056	0.0087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	12	90491669	90492074	7	-1.0658
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	12	90493557	99791792	6455	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	12	99791814	99798734	32	-0.4284
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	12	99803093	129228886	19676	-0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	12	129230513	129232297	6	-1.1362
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	12	129232545	130444853	1089	-0.0247
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	12	130447464	130450562	3	1.458
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	12	130452931	133778189	1993	-0.0186
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	13	19026949	38071135	13568	-0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	13	38072036	38084757	16	-2.0861
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	13	38088330	51545054	9127	-0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	13	51546911	51555862	6	0.8469
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	13	51562372	57764113	3427	0.0102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	13	57764163	57775076	12	0.6187
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	13	57775100	83788063	16711	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	13	83788118	83792193	9	-0.8239
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	13	83792214	85857065	1339	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	13	85861148	85867620	12	0.4891
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	13	85868963	101985742	10284	0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	13	101985888	101986845	3	-1.1582
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	13	101987034	111584506	7903	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	13	111588967	111590028	3	-1.2169
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	13	111592780	115108397	1898	-0.0107
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	14	19002124	19604114	44	0.0316
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	14	19607007	20422583	143	-0.4927
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	14	20423372	21175274	571	0.0069
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	14	21176089	21176092	2	-1.2817
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	14	21178398	22325140	693	-0.0143
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	14	22325471	22328574	10	-0.7704
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	14	22329006	37335870	9746	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	14	37336522	37336635	3	1.4577
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	14	37336972	107285437	44377	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	15	20016328	20454259	70	0.1773
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	15	20468564	22383201	269	-0.3196
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	15	22385001	22681250	84	-0.6361
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	15	22751094	24054787	613	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	15	24055437	24059307	20	-0.9536
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	15	24065693	76891241	33298	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	15	76891511	76895198	13	-2.1466
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	15	76895344	76895775	8	-0.9233
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	15	76902179	102469040	17690	-0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	16	60777	33380766	20257	-0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	16	33404140	33631830	77	-0.3044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	16	33643399	50074595	2579	0.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	16	50074928	50081778	4	1.1262
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	16	50086297	55795214	4407	-0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	16	55796389	55822397	21	0.5009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	16	55822444	78371608	14429	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	16	78372440	78384738	15	-1.9202
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	16	78384765	90287535	10648	-0.0138
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	17	526	665044	337	-0.0123
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	17	667243	667377	2	2.0326
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	17	678491	18319862	11104	-0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	17	18355392	18441308	22	0.5989
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	17	18443622	44362363	12172	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	17	44364170	44784678	52	0.5551
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	17	44784982	78628863	20645	-0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	17	78629793	78634179	2	2.1589
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	17	78634300	81049726	963	0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	18	11543	63762300	40427	-6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	18	63767140	63767922	3	-2.401
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	18	63775595	78015057	10386	-0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	19	90910	52142615	24961	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	19	52142930	52148197	9	-1.0534
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	19	52154905	53518514	946	0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	19	53518747	53546855	20	0.79
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	19	53547361	59097854	3414	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	20	61305	1552503	1185	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	20	1557190	1560787	17	-0.8105
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	20	1560802	1560999	4	0.0425
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	20	1561580	1593893	41	1.44
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	20	1597946	4037528	1695	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	20	4037627	4038372	3	-1.5575
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	20	4038666	62956153	39560	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	21	10736871	10934086	31	0.1407
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	21	10935910	10956149	11	-0.3087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	21	10956152	10962100	4	0.1765
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	21	10963512	11002559	26	-0.4172
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	21	11002646	44968053	22572	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	21	44970873	44972812	2	-2.1224
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	21	44973667	48096957	1766	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	22	16052528	16061342	5	-1.1659
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	22	16077141	18614005	1181	-0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	22	18617515	18629153	12	-1.0519
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	22	18630060	24330218	3419	-0.0073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	22	24330269	24331967	2	-2.4933
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	22	24332625	24337949	4	-0.3641
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	22	24344422	24396814	20	0.5996
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	22	24401529	25659129	820	-0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	22	25661376	25918709	296	0.4618
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	22	25922342	27014467	1042	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	22	27016888	27021587	7	-0.9531
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	22	27021714	39363619	8705	-0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	22	39363684	39375307	23	-0.3813
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	22	39389628	50314809	7659	-0.0131
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	22	50314936	50326872	4	-1.0649
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	22	50327069	51234455	366	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	X	168477	62443462	33831	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	X	62450445	62505868	23	0.6849
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	X	62517002	76437473	6313	-0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	X	76471935	76523952	7	-1.0435
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	X	76545159	115138403	20643	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	X	115141541	115150638	5	1.1782
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	X	115156419	140727884	14815	-0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	X	140727917	140728178	3	1.2918
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	X	140735480	140740125	6	0.3822
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	X	140743898	145129242	3056	0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	X	145129515	145133362	8	-1.1335
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	X	145136044	155182354	5896	-0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	Y	2650438	6101425	872	-2.345
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	Y	6107901	6313572	90	-3.7025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	Y	6315579	7627911	585	-2.7107
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	Y	7628484	9823373	1098	-3.0239
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	Y	9826040	15590276	933	-2.754
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	Y	15590342	15594523	3	-7.6439
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	Y	15594889	19034392	1826	-2.8678
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	Y	19038302	21088297	960	-3.3676
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	Y	21088485	23981777	1087	-2.9061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	Y	23982659	27315972	653	-3.334
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	Y	27367487	27695095	88	-2.5561
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	Y	27717799	28078172	153	-3.6068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	Y	28078411	28112692	18	-2.2524
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	Y	28113407	28423938	85	-3.6798
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	Y	28438116	28642437	97	-2.5904
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	Y	28645367	28661292	11	-3.6275
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F10_896464	Y	28661650	59018259	75	-2.4607
