Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	1	3208470	245880329	128978	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	2	474222	242124735	131201	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	3	526235	30166127	16523	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	3	30167548	30167569	2	-1.5575
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	3	30167781	176287082	78258	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	3	176287662	176290623	2	-1.3057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	3	176291026	199023074	11534	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	4	1043934	125678855	69017	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	4	125679801	125682385	3	-1.272
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	4	125682475	185469659	31914	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	4	185471178	185472251	4	-1.035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	4	185475959	189836143	1727	-0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	5	967233	180293075	100458	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	6	959281	170745844	96431	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	7	671810	158077879	81263	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	8	607667	52585385	27147	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	8	52585658	52585776	2	-1.581
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	8	52586013	145304484	54332	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	9	779932	140058573	67990	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	10	405240	117447321	69375	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	10	117447337	117447849	4	-0.9776
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	10	117447976	135075077	11438	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	11	446120	133647740	77212	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	12	760163	67232295	36443	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	12	67243518	67245654	2	-1.3468
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	12	67250929	100202459	19922	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	12	100202576	100206154	2	-1.2629
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	12	100208060	131671419	17530	-0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	13	18348806	75308740	32584	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	13	75308760	75310901	2	-1.6612
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	13	75311368	94948045	11916	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	13	94950310	94950629	2	-1.223
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	13	94952597	103987458	6187	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	13	103990672	103990859	2	-1.281
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	13	103995714	114005560	5913	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	14	19571208	105059083	49419	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	15	21238778	99701830	44497	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	16	593460	69912814	28970	-0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	16	69913636	69917101	4	-1.1058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	16	69918962	87907437	11863	-0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	17	933971	78510305	36960	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	18	319586	23646900	12270	0.008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	18	23650488	23650996	2	-2.1629
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	18	23651530	75210228	30366	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	19	235018	11024689	3727	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	19	11029662	11030052	2	-1.4305
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	19	11038408	63570038	20207	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	20	403764	36246131	20282	-0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	20	36246849	36246920	2	-1.5458
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	20	36247855	61690281	16981	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	21	14269492	44763650	19840	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	21	44771803	44772112	2	-1.3797
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	21	44772277	46503202	730	-0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	22	15803930	47717016	16912	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	X	3167107	154558783	63755	9e-04
