Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	1	3218610	247813706	129034	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	2	484222	242476062	131193	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	3	2212571	30191123	16521	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	3	30192544	30192565	2	-1.5575
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	3	30192777	174804388	78254	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	3	174804968	174807929	2	-1.3057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	3	174808332	197538677	11534	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	4	1053934	125459405	69021	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	4	125460351	125462935	3	-1.272
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	4	125463025	185232665	31916	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	4	185234184	185235257	4	-1.035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	4	185238965	188763651	1726	-0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	5	914233	180360469	100458	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	6	1014281	170903919	96440	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	7	705284	158385118	81264	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	8	617667	52422832	27148	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	8	52423105	52423223	2	-1.581
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	8	52423460	145232496	54338	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	9	789932	140938752	68002	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	10	415240	117457331	69373	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	10	117457347	117457859	4	-0.9776
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	10	117457986	135225087	11438	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	11	456120	134142530	77202	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	12	889902	68946028	36438	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	12	68957251	68959387	2	-1.3468
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	12	68964662	101678328	19923	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	12	101678445	101682023	2	-1.2629
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	12	101683929	133161346	17529	-0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	13	19450806	76410739	32581	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	13	76410759	76412900	2	-1.6612
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	13	76413367	96150044	11915	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	13	96152309	96152628	2	-1.223
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	13	96154596	105189457	6187	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	13	105192671	105192858	2	-1.281
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	13	105197713	114987458	5913	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	14	20501368	105988038	49417	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	15	23687685	101884307	44495	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	16	653459	71355313	28904	-0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	16	71356135	71359600	4	-1.1058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	16	71361461	89379936	11863	-0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	17	987221	80917016	36960	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	18	329586	25392902	12270	0.0081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	18	25396490	25396998	2	-2.1629
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	18	25397532	77109240	30363	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	19	284018	11163689	3727	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	19	11168662	11169052	2	-1.4305
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	19	11177408	58878226	20207	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	20	455764	36812717	20285	-0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	20	36813435	36813506	2	-1.5458
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	20	36814441	62219837	16981	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	21	15347621	45939222	19840	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	21	45947375	45947684	2	-1.3797
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	21	45947849	47678774	729	-0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	22	17423930	49331012	16911	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F12_896608	X	3157107	154905589	63772	8e-04
