Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	1	3208470	10378734	4097	0.0694
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	1	10380965	10381026	2	-1.8431
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	1	10391305	63239896	29236	0.0587
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	1	63240183	63244691	7	-0.8854
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	1	63245456	120328884	34333	0.0434
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	1	142745296	245880329	61335	0.5677
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	2	474222	242124735	131184	0.0432
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	3	526235	130794900	70909	0.0431
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	3	130795679	130799284	2	-1.2805
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	3	130800275	135026484	2535	0.0395
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	3	135026607	135029404	3	-0.9981
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	3	135029906	199023074	32866	0.0321
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	4	1043934	86862766	47320	0.3134
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	4	86862881	86863126	3	1.6825
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	4	86863154	182321883	52165	0.2983
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	4	182326673	182533725	193	-0.4048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	4	182536423	189836143	3007	0.3163
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	5	967233	36823635	21250	0.0424
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	5	36823852	36828385	4	-1.3943
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	5	36828572	180293075	79181	0.0429
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	6	959281	33959724	19740	0.2963
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	6	33959945	33962794	4	-0.7426
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	6	33963511	79209803	23421	0.2878
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	6	79211581	96991607	9512	-0.4006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	6	97002861	97131829	75	0.3329
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	6	97138416	97158574	16	-0.4759
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	6	97159475	97663918	322	0.2892
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	6	97664129	98160799	255	-0.3952
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	6	98162181	98897269	382	0.2683
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	6	98899980	166957396	41440	-0.4033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	6	166963235	170745844	1171	0.3061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	7	671810	120635757	61283	0.0414
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	7	120635804	120675313	28	-0.3452
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	7	120680589	147191268	14467	0.0394
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	7	147195016	147195457	2	-2.2042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	7	147197705	157414564	5264	0.0473
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	7	157417209	157417240	2	-1.2369
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	7	157420053	158077879	215	0.0267
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	8	607667	89424768	48196	0.3503
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	8	89425576	89441191	8	-0.6423
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	8	89443658	145304484	33300	0.3479
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	9	779932	89575359	36824	-0.3347
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	9	89575530	89576302	2	-2.6364
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	9	89576445	105631305	9744	-0.3278
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	9	105632371	105633681	2	-2.4891
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	9	105634016	140058573	21283	-0.3264
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	10	405240	1398581	303	-0.3527
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	10	1399973	1404085	2	-2.4314
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	10	1404544	5809847	3063	-0.3476
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	10	5811349	5966222	98	-0.8208
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	10	5966780	135075077	77221	-0.3328
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	11	446120	5104231	2009	-0.3188
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	11	5105336	5109496	3	-2.2014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	11	5109837	80711351	41051	-0.3323
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	11	80715032	80904528	129	-1.8883
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	11	80905066	133647740	33881	-0.3348
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	12	760163	71920302	39165	-0.3007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	12	71923016	71956122	18	-1.5695
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	12	71957099	111631946	24011	-0.3015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	12	111631973	111634586	2	-1.5195
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	12	111636480	131671419	10611	-0.2931
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	13	18348806	42029835	15038	0.0741
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	13	42031129	54033749	6403	-0.8027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	13	54382143	54684931	163	0.013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	13	54687952	54982132	148	-0.8444
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	13	54984342	55648896	273	0.0389
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	13	55652503	60937107	2775	-0.8028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	13	60943644	97232262	20913	0.0501
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	13	97234644	97283653	44	0.4291
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	13	97284648	105416086	5448	0.0595
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	13	105416678	105417457	3	-1.0925
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	13	105417630	114005560	5336	0.0726
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	14	19571208	80550650	34591	-0.3317
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	14	80550837	80551085	2	-3.1234
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	14	80551311	105059083	14728	-0.3423
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	15	21238778	99701830	44428	-0.3403
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	16	593460	51496965	17896	0.0712
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	16	51501083	51502807	5	-0.8135
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	16	51504315	52013164	297	0.051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	16	52027445	52037812	19	-0.7697
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	16	52040193	64512617	8342	0.0566
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	16	64513766	64518944	11	-1.0631
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	16	64523385	69396838	2238	0.0608
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	16	69403572	69757550	65	0.5461
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	16	69762695	84661046	10266	0.072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	16	84661388	84661643	2	-1.3313
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	16	84661665	87907437	1692	0.081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	17	933971	45829154	19690	0.0558
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	17	45838087	78506194	17275	0.5943
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	17	78506957	78510305	2	-0.0106
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	18	319586	75210228	42647	0.3256
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	19	235018	58559112	21771	0.052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	19	58563202	58588445	22	-0.5843
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	19	58714221	63570038	2141	0.0497
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	20	403764	23224865	15383	-0.3279
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	20	23225229	23225876	2	-2.3862
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	20	23226038	46254017	11609	-0.3136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	20	46255067	50569040	2670	1.2981
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	20	50571926	61690281	7550	-0.327
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	21	14269492	46503202	20569	0.0398
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	22	15803930	47717016	16913	0.3708
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	X	3167107	131337367	53272	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	X	131337794	131337864	2	-3.9827
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	X	131338713	146075843	6964	-0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	X	146077991	146083562	5	-3.743
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	X	146086598	154558783	3297	0
