Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	1	3218610	10456147	4097	0.0694
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	1	10458378	10458439	2	-1.8431
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	1	10468718	63467308	29233	0.0586
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	1	63467595	63472103	7	-0.8854
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	1	63472868	120527361	34396	0.0444
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	1	149881398	247813706	61330	0.5677
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	2	484222	242476062	131176	0.0432
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	3	2212571	129312210	70904	0.043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	3	129312989	129316594	2	-1.2805
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	3	129317585	197538677	35403	0.0325
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	4	1053934	86643742	47318	0.3134
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	4	86643857	86644102	3	1.6825
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	4	86644130	182084889	52173	0.2983
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	4	182089679	182296731	193	-0.4048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	4	182299429	188763651	3006	0.3163
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	5	914233	36787878	21252	0.0424
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	5	36788095	36792628	4	-1.3943
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	5	36792815	180360469	79179	0.0429
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	6	1014281	33851746	19741	0.2963
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	6	33851967	33854816	4	-0.7426
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	6	33855533	79153084	23423	0.2877
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	6	79154862	96884886	9511	-0.4006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	6	96896140	97025108	75	0.3329
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	6	97031695	97051853	16	-0.4759
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	6	97052754	97557197	322	0.2892
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	6	97557408	98054078	255	-0.3952
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	6	98055460	98790548	382	0.2683
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	6	98793259	167037406	41447	-0.4032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	6	167043245	170903919	1171	0.3061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	7	705284	120848521	61286	0.0413
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	7	120848568	120888077	28	-0.3452
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	7	120893353	147560335	14465	0.0394
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	7	147564083	147564524	2	-2.2042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	7	147566772	157721803	5264	0.0473
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	7	157724448	157724479	2	-1.2369
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	7	157727292	158385118	215	0.0267
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	8	617667	89355652	48200	0.3502
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	8	89356460	89372075	8	-0.6423
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	8	89374542	145232496	33303	0.3478
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	9	789932	90385539	36831	-0.3346
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	9	90385710	90386482	2	-2.6364
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	9	90386625	106591484	9745	-0.3277
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	9	106592550	106593860	2	-2.4891
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	9	106594195	140938752	21287	-0.3264
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	10	415240	1408581	303	-0.3527
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	10	1409973	1414085	2	-2.4314
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	10	1414544	5769841	3063	-0.3476
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	10	5771343	5926216	98	-0.8208
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	10	5926774	135225087	77219	-0.3329
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	11	456120	5147655	2008	-0.3191
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	11	5148760	5152920	3	-2.2014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	11	5153261	81033703	41049	-0.3323
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	11	81037384	81226880	129	-1.8883
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	11	81227418	134142530	33874	-0.3348
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	12	889902	73634035	39160	-0.3007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	12	73636749	73669855	18	-1.5695
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	12	73670832	113147563	24012	-0.3014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	12	113147590	113150203	2	-1.5195
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	12	113152097	133161346	10610	-0.2932
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	13	19450806	43131835	15035	0.074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	13	43133129	55135748	6404	-0.8026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	13	55484142	55786930	163	0.013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	13	55789951	56084131	148	-0.8444
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	13	56086341	56750895	273	0.0389
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	13	56754502	62039106	2775	-0.8028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	13	62045643	98434261	20911	0.0501
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	13	98436643	98485652	44	0.4291
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	13	98486647	106618085	5448	0.0595
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	13	106618677	106619456	3	-1.0925
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	13	106619629	114987458	5336	0.0726
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	14	20501368	81480897	34588	-0.3318
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	14	81481084	81481332	2	-3.1234
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	14	81481558	105988038	14729	-0.3423
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	15	23687685	101884307	44426	-0.3403
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	16	653459	52939464	17896	0.0712
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	16	52943582	52945306	5	-0.8135
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	16	52946814	53455663	297	0.051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	16	53469944	53480311	19	-0.7697
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	16	53482692	65955116	8342	0.0566
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	16	65956265	65961443	11	-1.0631
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	16	65965884	86103545	12504	0.07
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	16	86103887	86104142	2	-1.3313
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	16	86104164	89379936	1692	0.081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	17	987221	48474155	19690	0.0558
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	17	48483088	80912905	17275	0.5943
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	17	80913668	80917016	2	-0.0106
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	18	329586	77109240	42644	0.3256
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	19	284018	53867300	21771	0.052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	19	53871390	53896633	22	-0.5843
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	19	54022409	58878226	2141	0.0497
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	20	455764	23276865	15386	-0.3279
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	20	23277229	23277876	2	-2.3862
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	20	23278038	46820610	11609	-0.3136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	20	46821660	51135633	2670	1.2981
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	20	51138519	62219837	7550	-0.327
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	21	15347621	47678774	20568	0.0398
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	22	17423930	49331012	16912	0.3707
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	X	3157107	131509686	53293	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	X	131510113	131510183	2	-3.9827
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	X	131511032	146268151	6962	-0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	X	146270299	146275870	5	-3.743
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G02_896612	X	146278906	154905589	3295	2e-04
