Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	1	3208470	245880329	129054	0.0958
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	2	474222	14631435	8877	-0.044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	2	14631917	14633458	2	-1.5497
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	2	14638738	242124735	122367	0.0338
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	3	526235	20212083	10762	-0.0202
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	3	20215264	20566898	206	-0.3406
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	3	20570372	142807246	66881	-0.0152
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	3	142815439	142899735	58	-0.8003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	3	142900192	199023074	28448	-0.0241
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	4	1043934	55288622	30146	-0.0373
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	4	55290765	55691660	282	0.2543
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	4	55697874	90481781	19100	-0.0312
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	4	90485120	181758845	49963	-0.2766
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	4	181762125	182471912	137	-0.754
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	4	182483450	189836143	3071	-0.2983
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	5	967233	118785630	63413	0.0789
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	5	118788569	118928131	74	-0.385
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	5	118933082	180293075	36996	-0.0246
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	6	959281	49394786	29001	0.6
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	6	49396303	49396584	3	-0.346
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	6	49397814	51050594	905	0.5727
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	6	51055159	71018885	8660	0.2275
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	6	71018902	101003953	16582	-0.3496
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	6	101005656	101054392	26	-0.9081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	6	101056543	122799749	12251	-0.3484
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	6	122800516	122843634	27	-0.7512
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	6	122843846	170745844	28966	-0.3449
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	7	671810	53986737	31684	0.4372
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	7	53987477	53987615	2	-0.695
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	7	53989657	158077879	49612	0.5533
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	8	607667	43052529	24748	0.2347
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	8	47580110	127777476	46037	0.5685
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	8	127778057	127786380	9	-0.077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	8	127797155	145304484	10722	0.5641
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	9	779932	17926045	10356	-0.3464
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	9	17926235	17926353	2	-2.2037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	9	17926628	19667543	1480	-0.3391
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	9	19668269	23372382	2530	-0.7441
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	9	23376738	27044494	2125	-0.3339
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	9	27055021	27132786	60	-0.8825
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	9	27134483	27134516	2	-3.02
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	9	27135518	28366005	853	-0.7909
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	9	28366898	123383414	41864	-0.3303
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	9	123383521	124298870	594	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	9	124303506	140058573	8108	-0.3334
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	10	405240	96581052	56357	-0.1764
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	10	96581274	97549684	618	0.085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	10	97551931	97552673	2	-0.96
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	10	97558447	97858195	128	0.0503
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	10	97860480	135075077	23722	-0.262
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	11	446120	133647740	77239	-0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	12	760163	131671419	73931	-0.027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	13	18348806	20010470	507	-0.3709
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	13	20010935	21003664	561	-0.753
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	13	21013232	113128375	55332	-0.3421
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	13	113130707	113132512	3	-1.6886
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	13	113133868	113311720	80	-0.3576
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	13	113312478	113313191	3	-1.1585
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	13	113313306	114005560	126	-0.334
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	14	19571208	24615166	2131	-0.3285
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	14	24616745	24617072	2	0.937
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	14	24617310	27858640	1803	-0.3185
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	14	27861385	29081153	669	0.0243
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	14	29081196	29164003	62	0.3551
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	14	29164384	29170210	5	0.0138
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	14	29170375	29412569	143	-0.3427
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	14	29413041	30181611	417	0.028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	14	30182752	32179991	1157	0.2853
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	14	32182570	105059083	43026	-0.3272
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	15	21238778	23452361	1126	0.2688
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	15	23457312	39034768	7622	-0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	15	39038469	51558360	6962	-0.3313
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	15	51558372	52572324	774	0.0398
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	15	52574217	56783268	2576	-0.3199
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	15	56784219	60047383	2472	-0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	15	60062232	63577281	2044	-0.3594
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	15	63579892	64196282	360	-0.0133
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	15	64197705	64198322	3	-1.3846
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	15	64199311	65946573	1152	0.0091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	15	65946783	65949185	2	-1.1192
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	15	65951409	82526310	9112	0.1399
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	15	82526868	86197002	2042	-0.3491
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	15	86197103	91832963	3575	0.015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	15	91833427	95980901	2629	-0.3464
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	15	95981909	99701830	2060	0.1462
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	16	593460	69714924	28870	-0.1708
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	16	69724057	69748906	3	-2.1931
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	16	69753654	87907437	11967	-0.2963
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	17	933971	27771050	12004	-0.0498
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	17	27772258	78510305	24975	0.2182
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	18	319586	2218912	624	-0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	18	2226418	30098027	15526	0.3129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	18	30101869	36705609	4023	-0.0478
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	18	36709132	36709145	2	-1.3854
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	18	36710887	65437757	17771	0.1819
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	18	65437883	65438009	3	-2.0532
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	18	65439626	75210228	4696	0.2
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	19	235018	7255492	2025	-0.0386
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	19	7260687	7276273	4	0.9928
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	19	7295986	49363750	16071	-0.043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	19	49367988	49635039	144	-0.3532
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	19	49635320	63570038	5701	-0.0557
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	20	403764	41497520	23882	0.1892
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	20	41498057	41501688	3	-0.8599
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	20	41506871	61690281	13392	0.042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	21	14269492	46503202	20570	-0.3455
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	22	15803930	47717016	16919	-0.0246
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	X	3167107	32073693	13259	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	X	32090487	32534635	299	-0.4518
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	X	32535340	44722288	5162	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	X	44722406	44805180	30	-0.4734
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G03_896632	X	44805775	154558783	44992	0.0057
