Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	3208470	43249544	21292	0.0788
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	43250383	43251193	2	-1.478
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	43259211	73551002	18518	0.1394
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	73554632	73554736	2	-1.3803
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	73556293	119335332	27247	0.1482
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	119335346	150318879	1502	0.5306
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	150326204	153817715	1761	0.8701
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	153821277	154148511	137	0.5109
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	154154396	155380119	594	0.0726
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	155380795	156947804	1089	0.5793
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	156985537	158507057	957	0.1026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	158510349	159925404	689	0.534
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	159926664	160910791	791	0.1164
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	160910941	162273442	995	0.6091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	162275802	164985508	2205	0.1418
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	164986677	167845210	2095	0.5888
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	167847341	173465409	3458	0.1279
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	173469229	174256722	301	0.6027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	174257123	175764509	900	0.1392
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	175765539	178267208	1620	0.6181
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	178277983	178878506	385	0.1261
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	178879348	180968824	1469	0.6125
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	180972819	181006437	24	0.1899
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	181010472	181050742	14	0.6869
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	181050762	182974164	1320	0.1321
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	182974571	182974897	2	-1.0451
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	182976205	184122873	632	0.134
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	184131135	185705257	981	-0.6555
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	185706582	185745432	25	0.0441
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	185746358	187074470	848	-0.6575
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	187080136	190025787	1542	0.1461
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	190031663	191177402	667	0.6495
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	191177483	192300360	879	0.1502
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	192306875	199135503	3774	0.6177
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	199137839	204980639	3697	0.0977
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	204981095	205022442	33	0.604
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	205026839	207066114	1516	0.1093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	207066954	207801631	527	-0.6862
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	207802460	212401724	3088	0.1361
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	212404570	212471401	65	-0.6925
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	212476644	216790158	3003	0.1588
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	216811774	217395980	389	0.6257
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	217399443	219223247	1216	0.1518
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	219223758	219412589	118	-0.683
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	219413103	220510252	786	0.135
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	220512925	226563510	3339	-0.6913
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	226563806	227521909	490	0.0738
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	227531216	227553018	17	0.5663
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	227562303	228183740	404	0.1423
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	228184894	230893966	1907	0.6093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	230894795	231878519	765	0.1239
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	231879695	233622074	1141	0.5708
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	233629915	234415923	447	0.0891
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	234415992	234416005	2	-1.0883
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	234427378	236374530	1599	0.1616
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	236375225	237168933	634	-0.6653
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	237179773	238424796	903	0.1542
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	238425005	238434145	14	0.6971
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	238434398	238761179	296	0.161
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	238763375	238764299	3	-0.5746
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	238764817	238807246	23	0.047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	238807399	239328155	353	0.637
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	239332712	241754773	1515	0.1486
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	241754919	243005168	708	0.5963
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	243006533	243141322	62	0.1021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	243145127	244191459	721	0.6262
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	244191690	244200991	10	0.121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	244203176	244228077	20	0.6242
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	1	244228200	245880329	444	0.1214
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	2	474222	86058616	49540	0.1424
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	2	86059453	86136471	51	0.5761
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	2	86367404	131436729	18728	0.1422
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	2	131440977	131450318	7	-0.8952
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	2	131451482	242124735	62892	0.1548
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	3	526235	72720464	41808	0.1568
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	3	72721919	72722022	2	-2.167
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	3	72724106	162169335	46128	0.1622
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	3	162229862	162233128	6	-0.8002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	3	162235938	162244942	7	-0.2048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	3	162249193	199023074	18379	0.1593
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	4	1043934	168566487	92238	0.1762
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	4	168570603	168570652	2	-1.4552
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	4	168575607	189836143	10453	0.1789
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	5	967233	15391073	9841	-0.6909
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	5	15391164	15391345	3	-3.4223
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	5	15391536	171126843	85534	-0.6727
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	5	171127175	171127495	2	-2.8694
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	5	171127732	180293075	4781	-0.7329
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	6	959281	4646129	2597	0.6359
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	6	4646143	4646500	2	1.8662
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	6	4648378	24430016	13824	0.6362
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	6	24433788	24434264	2	-0.4335
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	6	24436685	57314444	17463	0.6154
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	6	62292492	73684314	6225	0.1751
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	6	73687659	142060987	38983	-0.6704
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	6	142067449	142074530	12	-4.9347
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	6	142076497	170745844	17202	-0.6906
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	7	671810	15032200	7029	0.1721
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	7	15036707	15049430	21	-0.6611
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	7	15049586	69819699	29371	0.1835
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	7	69826272	70149472	156	0.7446
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	7	70156179	90019936	8657	0.1828
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	7	90061236	92716302	1713	-0.657
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	7	92718646	97767616	2952	0.2068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	7	97773607	113311776	7449	-0.684
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	7	113312375	114137225	379	0.1902
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	7	114142238	114172037	21	-0.5737
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	7	114174277	114261787	65	0.2309
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	7	114262801	115643838	732	-0.6469
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	7	115647268	158077879	22720	0.1741
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	8	607667	145304484	81494	0.1603
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	9	779932	38737688	23246	-0.6741
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	9	70228864	140058573	44648	0.1206
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	10	405240	54807251	31366	-0.6326
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	10	54807327	54807367	2	-4.2327
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	10	54808045	135075077	49243	-0.625
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	11	446120	7508847	3588	0.1193
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	11	7512305	7512737	2	-1.122
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	11	7515305	59207169	28811	0.1553
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	11	59207393	59217172	4	-0.7407
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	11	59217275	126441644	40037	0.1346
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	11	126441732	126441766	2	-1.3342
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	11	126443546	133647740	4775	0.1396
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	12	760163	131671419	73915	0.1482
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	13	18348806	114005560	56623	0.1522
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	14	19571208	105059083	49424	0.146
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	15	21238778	99701830	44503	0.1387
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	16	593460	5769552	2113	0.0781
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	16	5770106	5772329	2	-1.6808
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	16	5772947	31757800	11767	0.1324
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	16	45065166	50413839	3178	-0.697
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	16	50413852	50414957	3	-2.4334
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	16	50417969	69396838	11709	-0.6887
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	16	69403572	69757550	66	0.2186
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	16	69762695	87907437	11908	-0.7217
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	17	933971	6534646	2742	-0.7785
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	17	6534738	6535424	3	-3.0425
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	17	6535568	14073503	4698	-0.7365
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	17	15498465	38288238	9253	0.0858
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	17	38289376	78510305	20261	0.5844
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	18	319586	75210228	42642	0.1627
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	19	235018	7251055	2025	0.0386
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	19	7255492	7295986	6	-1.1284
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	19	7303015	63570038	21908	0.0834
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	20	403764	6309187	3509	0.0963
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	20	6309242	6309273	2	-1.2481
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	20	6309344	61690281	33757	0.1321
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	21	14269492	42437267	18682	0.1454
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	21	42437994	42440642	2	-1.2217
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	21	42441206	46503202	1893	0.0776
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	22	15803930	25344467	2642	0.1169
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	22	25346888	25351714	8	-0.7819
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	22	25361721	47717016	14261	0.1045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	X	3167107	10580632	1888	-0.0521
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	X	10582676	12614280	1472	0.8055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	X	12779905	40050508	13249	-0.0225
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	X	40054614	40054785	2	-2.7838
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	X	40056620	105138050	24481	-0.0103
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	X	105138455	105139150	2	-2.2826
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	X	105142486	106834653	558	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	X	106837644	106837858	2	-1.7822
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	X	106841428	137816328	14683	-0.0106
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	X	137816403	137816945	2	-1.7842
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G05_896566	X	137819367	154558783	7311	-0.0176
