Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	1	3208470	63675846	33572	-0.3304
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	1	63679468	66759753	2254	0.4966
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	1	66764080	68139044	1020	-0.3485
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	1	68144080	68959090	560	0.4944
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	1	68964832	72017041	1556	-0.3463
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	1	72025164	72241736	95	0.5182
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	1	72243158	74377263	1141	-0.3562
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	1	74386662	74421071	19	0.5554
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	1	74424257	75287585	424	0.1209
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	1	75293066	76419831	760	0.4847
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	1	76422237	84984614	5111	-0.3631
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	1	84986488	84993425	16	-5.2939
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	1	84996846	118384931	19900	-0.3538
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	1	118385328	245880329	62424	0.1352
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	2	474222	114137827	59469	-0.3381
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	2	114139441	114335790	104	-0.975
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	2	114336414	117148661	1508	-0.3483
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	2	117148735	118260337	317	-1.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	2	118262124	118882597	372	-0.3079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	2	118882726	118882759	2	-2.0886
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	2	118882910	133737441	7163	-0.3388
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	2	133745635	176745557	24982	0.0876
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	2	176750333	176871324	74	0.3938
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	2	176871680	176929883	30	0.0931
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	2	176932737	177003018	33	-0.3084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	2	177009454	242124735	37017	0.0886
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	3	526235	61252290	33557	-0.2864
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	3	61252785	61436838	116	-0.9409
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	3	61438042	118097876	29851	-0.3041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	3	118102817	118443890	269	-1.01
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	3	118444327	120498851	1252	-0.3136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	3	120499053	120500665	3	-1.5571
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	3	120502866	199023074	41125	-0.2972
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	4	1043934	154693790	84366	0.0753
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	4	154693816	154738754	35	-0.3493
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	4	154740230	179116873	13703	0.0668
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	4	179118490	179120100	11	-0.626
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	4	179120136	189836143	4561	0.0724
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	5	967233	12828705	8285	0.4004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	5	13226664	27359978	7433	0.0509
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	5	27360468	45414213	10203	0.3754
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	5	50160613	180293075	74514	0.0687
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	6	959281	64006264	34636	0.4055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	6	64010314	170745844	61777	0.0704
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	7	671810	48909934	28159	0.3975
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	7	48910365	49072484	121	0.1083
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	7	49072921	62955742	5096	0.378
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	7	62958725	158077879	47912	0.6355
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	8	607667	145304484	81504	0.3897
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	9	779932	8662630	4859	-0.3602
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	9	8665968	8666097	2	-2.5507
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	9	8667054	21809477	8525	-0.3577
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	9	21818110	22062730	160	-2.4498
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	9	22063334	134666693	52141	-0.3477
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	9	134666720	134764876	63	-2.8994
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	9	134764910	134805090	106	-1.5862
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	9	134807948	140058573	1996	-0.3213
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	10	405240	135075077	80669	-0.3439
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	11	446120	63136426	34511	0.0801
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	11	63136502	63153773	4	-1.1335
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	11	63158590	133647740	42659	0.0798
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	12	760163	80912433	44640	0.0787
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	12	80912932	81310410	244	-0.3499
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	12	81312103	131671419	29015	0.0861
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	13	18348806	114005560	56518	-0.3557
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	14	19571208	105059083	49420	0.3917
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	15	21238778	99701830	44496	0.1039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	16	593460	6452734	2580	-0.3542
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	16	6453289	6527248	92	-1.1635
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	16	6527305	87907437	38070	-0.3454
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	933971	5360473	1909	0.1539
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	5364766	6566109	866	0.6599
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	6571160	23046682	7197	0.1511
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	23051086	27170085	1770	-0.3329
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	27171997	27716509	236	0.1288
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	27718343	31061533	1590	0.5063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	31068455	33071683	884	-0.3417
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	33074087	33983767	258	0.4765
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	33989328	49615840	6974	-0.3315
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	49617516	50308029	430	0.4847
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	50312822	50461254	101	-0.3883
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	50469180	51787082	1038	0.4863
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	51787678	54317920	1662	-0.3296
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	54319214	64238236	4923	0.4884
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	64239720	64671085	318	-0.3436
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	64681005	65088075	240	0.4634
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	65091966	65408959	161	-0.3222
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	65410097	65417631	15	0.4333
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	65421016	65443404	22	-0.2484
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	65447523	66534183	842	0.4968
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	66538543	69328521	2119	-0.3292
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	70203523	71080565	374	0.5082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	71086889	78482194	2976	-0.3326
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	78483056	78510305	23	0.1733
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	18	319586	48380634	27695	-0.3473
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	18	48418898	48421426	2	-2.937
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	18	48422151	75210228	14857	-0.3567
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	19	235018	63570038	23928	0.0908
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	20	403764	18859346	12121	0.3948
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	20	18864902	18865709	2	-1.5717
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	20	18868358	61690281	25150	0.4135
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	21	14269492	46503202	20568	0.0716
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	22	15803930	23698317	1464	-0.2966
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	22	23702291	23703813	2	-2.1529
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	22	23703985	36307125	8598	-0.3053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	22	36307228	36309210	5	-1.5941
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	22	36311958	47717016	6803	-0.3176
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	X	3167107	45668084	19208	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	X	45671162	45673421	3	-2.6085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	X	45679433	81868537	12105	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	X	81869708	81872035	2	-1.6872
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	X	81875229	112352405	13268	-0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	X	112353571	112353767	3	-1.411
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	X	112355557	154558783	19141	0.0057
