Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	1	3218610	63903258	33569	-0.3304
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	1	63906880	66987165	2254	0.4966
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	1	66991492	68366456	1020	-0.3485
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	1	68371492	69186502	560	0.4944
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	1	69192244	72244453	1621	-0.3387
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	1	72252576	72469148	95	0.5182
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	1	72470570	74604675	1141	-0.3562
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	1	74614074	74648483	19	0.5554
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	1	74651669	75514997	424	0.1209
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	1	75520478	76647243	760	0.4847
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	1	76649649	85212026	5110	-0.363
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	1	85213900	85220837	16	-5.2939
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	1	85224258	118583408	19899	-0.3539
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	1	118583805	247813706	62419	0.1352
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	2	484222	114421357	59461	-0.3381
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	2	114422971	114619320	104	-0.975
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	2	114619944	117432191	1507	-0.3483
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	2	117432265	118543867	317	-1.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	2	118545654	119166127	373	-0.307
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	2	119166256	119166289	2	-2.0886
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	2	119166440	134020971	7161	-0.3388
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	2	134029165	177037311	24983	0.0875
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	2	177042087	177163078	74	0.3938
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	2	177163434	177221637	30	0.0931
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	2	177224491	177294772	33	-0.3084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	2	177301208	242476062	37018	0.0886
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	3	2212571	61277250	33556	-0.2863
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	3	61277745	61461798	116	-0.9409
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	3	61463002	116615186	29847	-0.3041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	3	116620127	116961200	269	-1.01
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	3	116961637	197538677	42379	-0.2977
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	4	1053934	154474340	84370	0.0753
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	4	154474366	154519304	35	-0.3493
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	4	154520780	178879879	13704	0.0668
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	4	178881496	178883106	11	-0.626
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	4	178883142	188763651	4560	0.0723
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	5	914233	12775705	8287	0.4003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	5	13173664	27324221	7433	0.0509
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	5	27324711	45378456	10201	0.3754
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	5	50124856	180360469	74514	0.0687
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	6	1014281	63948305	34639	0.4054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	6	63952355	170903919	61783	0.0704
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	7	705284	48939388	28159	0.3975
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	7	48939819	49101938	121	0.1083
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	7	49102375	63318307	5095	0.378
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	7	63321290	158385118	47914	0.6354
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	8	617667	145232496	81511	0.3896
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	9	789932	8672630	4859	-0.3602
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	9	8675968	8676097	2	-2.5507
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	9	8677054	21819477	8527	-0.3576
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	9	21828110	22072730	160	-2.4498
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	9	22073334	135676872	52151	-0.3476
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	9	135676899	135775055	63	-2.8994
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	9	135775089	135815269	106	-1.5862
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	9	135818127	140938752	1996	-0.3213
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	10	415240	135225087	80667	-0.3439
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	11	456120	63379850	34507	0.0801
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	11	63379926	63397197	4	-1.1335
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	11	63402014	134142530	42653	0.0798
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	12	889902	82388302	44635	0.0787
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	12	82388801	82786279	245	-0.3469
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	12	82787972	133161346	29014	0.0861
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	13	19450806	114987458	56515	-0.3557
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	14	20501368	105988038	49418	0.3917
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	15	23687685	101884307	44494	0.1039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	16	653459	6512733	2580	-0.3542
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	16	6513288	6587247	92	-1.1635
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	16	6587304	89379936	38005	-0.3458
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	987221	5419749	1909	0.1539
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	5424042	6625385	866	0.6599
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	6630436	26022555	7197	0.1511
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	26026959	30145972	1770	-0.3329
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	30147884	30692396	236	0.1288
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	30694230	34037420	1590	0.5063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	34044342	35997570	884	-0.3417
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	35999974	36730241	256	0.4803
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	36735802	52260841	6975	-0.3315
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	52262517	52953030	431	0.4844
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	52957823	53106255	101	-0.3883
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	53114181	54432083	1038	0.4863
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	54432679	56963138	1662	-0.3296
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	56964432	66726641	4923	0.4884
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	66728125	67159490	318	-0.3436
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	67169410	67369855	104	0.4725
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	67374521	67374954	2	-0.5642
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	67379820	67576480	134	0.4717
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	67580371	67897364	161	-0.3222
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	67898502	67906036	15	0.4333
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	67909421	67931809	22	-0.2484
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	67935928	69022588	842	0.4968
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	69026948	71816926	2119	-0.3292
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	72691928	73568970	374	0.5082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	73575294	80888905	2976	-0.3326
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	17	80889767	80917016	23	0.1733
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	18	329586	77109240	42551	-0.3505
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	19	284018	58878226	23928	0.0908
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	20	455764	18911346	12124	0.3947
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	20	18916902	18917709	2	-1.5717
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	20	18920358	62219837	25150	0.4135
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	21	15347621	47678774	20567	0.0716
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	22	17423930	25368317	1464	-0.2966
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	22	25372291	25373813	2	-2.1529
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	22	25373985	37977179	8597	-0.3052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	22	37977282	37979264	5	-1.5941
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	22	37982012	49331012	6803	-0.3176
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	X	3157107	45783140	19209	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	X	45786218	45788477	3	-2.6085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	X	45794489	81981881	12114	0.0075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	X	81983052	81985379	2	-1.6872
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	X	81988573	112465749	13274	-0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	X	112466915	112467111	3	-1.411
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G09_896454	X	112468901	154905589	19142	0.0058
