Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	1	51598	61886594	35674	0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	1	61886769	61890775	3	-3.2089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	1	61892397	72532112	7293	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	1	72533444	72584492	52	0.6162
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	1	72585028	81661044	5788	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	1	81661190	81661193	2	1.9963
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	1	81661255	112491849	19920	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	1	112497488	112498913	25	0.5567
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	1	112507479	120888538	5123	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	1	120888902	120894018	2	1.348
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	1	120895123	150822419	2921	0.0211
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	1	150822508	150842085	21	-0.752
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	1	150846073	151026302	182	-0.023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	1	151028547	151035324	37	0.6439
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	1	151040529	159735152	5264	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	1	159738008	159914861	62	0.2705
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	1	159915245	167483561	6015	0.006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	1	167500598	167509025	8	0.5987
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	1	167521501	173063956	3532	0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	1	173064008	173064071	2	1.6054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	1	173064128	236573289	43288	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	1	236575612	236579237	3	-2.222
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	1	236581043	246804070	7260	0.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	1	246815817	246875732	36	-0.7237
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	1	246875992	247191011	141	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	2	2784	34544573	24109	0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	2	34552819	34594303	52	0.4916
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	2	34594531	41091739	4826	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	2	41091947	41096931	20	-0.577
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	2	41096959	52617712	8215	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	2	52617733	52635046	24	0.5424
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	2	52641453	86981712	22014	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	2	86982714	86990896	2	-1.8807
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	2	87015364	106241154	7666	-0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	2	106246527	106249661	5	-1.0686
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	2	106249763	106251789	7	-3.0477
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	2	106253687	127568491	12425	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	2	127573516	127574233	2	1.8871
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	2	127574416	134772954	4200	-8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	2	134773145	134773340	2	2.1453
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	2	134774727	146580899	7329	0.0095
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	2	146580913	146583404	22	0.8391
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	2	146594276	242738129	59150	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	3	35345	75503860	52762	0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	3	75509797	75722197	76	-0.588
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	3	75728074	85638124	5508	0.0089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	3	85643693	85701769	37	-0.2935
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	3	85703645	96938796	3603	0.0098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	3	96949570	96950800	2	-2.0455
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	3	96951370	100420474	1857	0.0137
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	3	100427148	100431998	36	0.667
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	3	100432004	129867213	18116	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	3	129869292	129895021	14	0.6436
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	3	129896851	131243312	623	0.0094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	3	131243814	131269064	11	-0.5497
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	3	131269429	131281425	37	-1.6164
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	3	131281471	164015644	20312	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	3	164017424	164023184	6	2.1028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	3	164028410	194360596	19247	0.0108
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	3	194360656	194365597	19	-1.2161
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	3	194369129	199380515	2707	0.0099
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	2281	9819488	5801	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	9823258	9840596	29	-1.9889
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	9843312	9999220	177	-0.028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	9999813	10011816	18	0.5308
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	10011844	10808680	668	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	10808810	10809200	2	-1.5617
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	10809346	34442166	16132	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	34446701	34506399	52	0.5364
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	34508213	48962605	8983	0.0087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	48985949	48986112	2	-1.8823
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	48991977	64375574	7599	-8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	64376535	64388380	21	-0.7392
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	64390176	64390853	8	-2.3765
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	64399026	68902978	2853	-0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	68909443	68943659	7	1.0744
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	68964800	68970737	5	-0.9148
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	68977394	90055842	12643	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	90055931	90073150	3	-1.6882
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	90073156	95381983	3072	0.0117
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	95382145	95383612	2	-1.3381
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	95384498	104964184	5782	0.0086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	104964520	104973050	11	0.722
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	104973186	138300211	19583	0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	138302088	138312864	22	-0.4462
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	138314408	153009236	8880	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	153010983	153011996	11	-1.0886
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	153012017	153014838	6	0.7576
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	153015223	172611602	12575	0.008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	172613549	172614351	9	0.6435
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	172616946	173224503	396	0.0368
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	173225723	173237396	16	0.8355
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	173238406	173665046	233	0.0402
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	173665163	173665218	2	1.4487
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	173677707	183967644	7017	0.0096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	183968731	183968738	2	1.7893
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	4	183972256	191261904	4866	0.0232
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	5	68532	738748	308	0.0462
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	5	751371	832881	31	0.4914
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	5	834547	7222476	5408	0.0073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	5	7230338	7242925	26	-0.8962
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	5	7255635	46306865	25048	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	5	46307687	46309259	6	1.1557
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	5	46313969	61609129	7952	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	5	61610748	61612030	2	-3.8694
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	5	61617949	65936687	2503	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	5	65939284	65942320	2	-1.342
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	5	65944332	75485776	5116	0.0106
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	5	75485823	75485900	3	1.3604
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	5	75485932	103879120	16409	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	5	103888272	103888503	4	1.6272
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	5	103888948	151494181	30803	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	5	151494212	151498544	18	0.4843
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	5	151500464	171465202	13865	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	5	171465492	171466387	2	1.6308
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	5	171469278	177131055	3639	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	5	177160157	177165211	3	2.264
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	5	177187571	180311494	1815	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	5	180312809	180365831	18	0.6408
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	5	180365870	180722926	170	0.0374
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	94661	239837	124	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	247306	326149	78	-0.3237
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	327559	29945051	21538	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	29945166	29982787	24	0.8073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	29984938	30171347	110	0.0404
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	30172541	30173298	3	1.2763
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	30173395	31388802	552	0.0233
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	31394255	31395480	6	-2.0259
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	31403385	67094767	19829	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	67097634	67099618	6	-2.0691
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	67099913	69710480	1848	0.0118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	69713776	69717962	2	1.5658
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	69719088	69743350	18	0.1317
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	69744419	69748089	4	-1.2555
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	69754127	70230017	285	-0.0144
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	70235181	70238857	3	-1.8968
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	70242993	74648586	2860	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	74648953	74658138	10	0.7911
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	74660283	77071668	1469	-0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	77073620	77073789	7	1.1933
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	77073797	77486449	290	0.0189
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	77492878	77525307	27	0.3255
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	77525342	79019608	974	-0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	79025784	79091904	112	-2.2487
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	79095953	95247444	10380	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	95249827	95250446	2	1.7712
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	95253367	95309939	42	0.0738
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	95310572	95310575	2	1.3481
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	95313484	103854146	5072	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	103854164	103854303	3	1.5103
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	103854423	148548305	28359	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	148548637	148548948	2	-1.8752
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	6	148550210	170892930	15922	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	52911	9771092	5918	0.0196
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	9772017	9797501	25	-0.7631
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	9802037	19167205	7643	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	19167340	19188463	46	0.3214
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	19188504	38257239	13809	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	38260626	38323848	103	-0.4262
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	38324752	63288733	13700	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	63289280	63295196	2	1.8463
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	63299591	91195805	15737	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	91196230	91196969	7	1.0283
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	91197272	100163125	5053	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	100167180	100167201	2	-2.7926
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	100170778	100839206	265	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	100846452	100846669	2	-2.212
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	100849631	109228448	5101	0.0087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	109228480	109241146	11	0.725
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	109241218	125833779	10048	0.0117
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	125833836	125833851	2	1.4447
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	125834112	133435717	4706	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	133435735	133456784	37	0.407
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	133459332	142154515	5690	-0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	142156294	142165614	27	-2.0885
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	142165684	142186163	4	-0.9443
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	142186497	143540182	840	0.0371
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	143540378	143697880	40	-0.7401
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	143705862	144764304	668	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	144767578	144767715	2	-1.281
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	144768287	152778571	4912	0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	152778578	152778645	2	-2.3216
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	152778648	155156790	1786	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	155158624	155159699	2	1.5599
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	155162397	158665326	2222	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	158665536	158673738	3	-1.0444
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	7	158676730	158819765	102	0.0344
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	8	21254	7973265	8034	0.0134
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	8	7980592	8055447	36	-0.3459
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	8	8055448	39349816	22841	0.0058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	8	39354760	39506122	59	0.7236
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	8	39507456	137747078	59831	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	8	137750801	137932589	177	-0.7611
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	8	137933062	146268959	5004	0.011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	9	36587	28293495	24246	0.0096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	9	28293612	28301629	4	1.4141
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	9	28302061	29078729	556	0.0211
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	9	29079610	29087680	6	1.0869
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	9	29090799	41619280	6531	0.0073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	9	41619489	44190849	114	-0.2359
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	9	44191224	44199159	4	1.1216
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	9	44201252	105606318	25305	-0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	9	105608517	105609111	2	-2.7259
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	9	105610523	124821723	14677	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	9	124822443	124826398	2	-2.2258
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	9	124826843	140211215	8490	0.0109
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	10	62759	67748218	45392	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	10	67749179	67779344	30	-0.8185
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	10	67792538	135079131	45528	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	10	135079709	135079858	2	-2.0947
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	10	135082644	135356694	151	-0.0168
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	11	188510	4923972	2478	0.011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	11	4924226	4930605	27	-1.3585
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	11	4931740	5740258	800	0.0189
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	11	5740499	5765715	34	0.4775
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	11	5765914	18905648	9430	0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	11	18905685	18915243	32	-0.3757
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	11	18915466	24398682	4392	-0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	11	24398750	24406833	7	-0.8333
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	11	24411752	25175687	585	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	11	25175721	25177588	2	1.6649
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	11	25180829	55133253	16898	0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	11	55133258	55198894	34	-0.4239
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	11	55200787	91470137	21395	0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	11	91470306	91470691	2	3.0969
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	11	91472352	133322682	30217	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	11	133322866	133323307	2	1.6761
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	11	133324652	134449982	840	0.0461
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	12	20703	41534170	26935	0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	12	41534384	41535152	3	1.7461
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	12	41536624	44190705	1597	0.0122
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	12	44192107	44195804	3	-1.8192
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	12	44199559	127794839	53472	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	12	127796466	127798095	5	-1.4522
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	12	127798250	132288262	3087	0.0169
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	13	17924949	36970036	13569	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	13	36970224	36986387	18	0.6453
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	13	36986609	50443055	9122	0.0079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	13	50444912	50447199	2	2.3996
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	13	50447558	114126499	41609	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	14	18072124	18730853	47	0.0507
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	14	18759317	19492423	142	-0.4608
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	14	19493212	21525537	1416	-0.0178
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	14	21526944	22020331	420	-0.2706
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	14	22023447	73076460	32314	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	14	73076604	73090732	7	-1.6799
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	14	73099653	73490229	196	-0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	14	73493530	73493535	2	-1.2386
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	14	73494809	73640655	81	0.0203
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	14	73640811	73649222	16	0.4302
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	14	73651274	87473129	9235	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	14	87473147	87483638	18	0.5172
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	14	87484036	105531947	11245	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	14	105550720	105550986	2	-1.7723
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	14	105553173	105598011	20	-0.1643
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	14	105601409	105638145	18	0.7608
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	14	105640508	105786534	66	-0.0345
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	14	105788401	105807969	11	-0.6137
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	14	105811392	105822329	7	0.2304
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	14	105824904	105824912	3	1.6256
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	14	105825048	105867070	16	0.0549
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	14	105867273	105873098	6	-0.8273
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	14	105886988	105920721	20	-0.0772
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	14	105921954	106029287	80	0.2179
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	14	106030687	106356482	208	-0.0507
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	15	18276341	22220749	1426	0.0221
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	15	22220838	22265932	36	-0.4642
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	15	22265951	28567955	3740	0.0161
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	15	28579861	28583081	2	2.3517
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	15	28595234	63601155	22604	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	15	63603995	63604577	2	-2.7283
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	15	63605440	100286563	24260	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	16	777	5547891	2630	0.0148
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	16	5548090	5548152	2	-1.6811
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	16	5548338	6786272	1540	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	16	6788189	6791696	3	1.4529
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	16	6792188	6952473	169	0.0292
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	16	6953201	6953569	2	1.9408
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	16	6955771	16492765	7453	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	16	16500214	16571077	11	0.6944
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	16	16574484	16616095	10	-0.0462
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	16	16621508	16623528	2	1.801
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	16	16646764	20536189	2216	0.0092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	16	20536579	20540846	4	1.0675
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	16	20543486	32783298	6181	0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	16	32785830	32857754	14	0.536
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	16	32858803	54354095	7095	0.0086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	16	54355723	54356280	3	2.6887
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	16	54361849	88815036	25183	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	17	526	611794	337	0.0421
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	17	613993	614127	2	2.1444
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	17	625241	36676616	20647	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	17	36676629	36683976	18	1.3993
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	17	36684057	41564110	2547	0.0182
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	17	41564451	41785076	100	-0.317
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	17	41791196	76243458	20691	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	17	76244388	76248774	2	2.1409
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	17	76248895	78643088	963	0.0114
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	18	1543	7738661	5578	0.0137
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	18	7742784	7745226	2	1.9214
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	18	7745352	56068765	30719	0.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	18	56068778	56073091	12	0.7036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	18	56073194	75985816	14433	0.0089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	18	75986412	75986828	2	1.9761
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	18	75991628	76116029	76	0.051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	19	41910	318089	75	0.0218
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	19	327382	339950	4	1.1319
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	19	340805	15645152	6553	0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	19	15651085	15652617	2	1.6598
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	19	15652664	40541149	10191	0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	19	40541162	40558641	26	-0.4716
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	19	40558794	63789666	12506	0.0102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	20	9305	1500503	1185	0.02
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	20	1505190	1508562	16	-0.7777
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	20	1508787	1508999	5	-0.1539
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	20	1509580	1541893	41	1.4861
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	20	1545946	62426597	41257	0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	21	9758742	13518880	165	-0.1327
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	21	13518903	13525448	3	1.5218
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	21	13534480	43641676	22378	0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	21	43646685	43666240	13	0.6429
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	21	43672498	43792481	84	0.0571
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	21	43795301	43797240	2	-2.4325
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	21	43798095	46921385	1767	0.0276
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	22	14432528	14441342	5	-0.9448
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	22	14457141	32503406	11911	0.0098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	22	32504947	32504962	2	-1.9176
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	22	32504973	49581321	11647	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	X	108477	3980675	863	-0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	X	3980988	4000878	32	-0.7544
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	X	4005005	84876594	43543	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	X	84876607	84893261	13	1.189
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	X	84893495	154835548	40101	0.0092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G10_896568	Y	2710438	57427647	8590	-0.8704
