Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	51598	735776	42	-0.3698
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	738002	16022502	8377	0.0221
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	16026084	16026512	6	-1.1596
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	16026788	34875241	10741	0.006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	34875257	34877078	19	-0.591
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	34886855	72519169	23778	-8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	72522436	72535958	11	-0.6578
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	72541006	72584492	49	0.4382
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	72585028	104026529	20112	-0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	104026655	104061555	14	-0.6505
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	104061762	110025907	3596	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	110025950	110027488	4	1.3493
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	110027527	110029038	10	0.3297
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	110034497	110044476	18	2.0774
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	110046521	112491849	1958	-0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	112497488	112498913	25	0.4401
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	112507479	147291432	6384	-0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	147303148	147689241	162	-0.5278
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	147695830	150822330	1496	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	150822391	150852862	30	1.7629
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	150852902	157133197	3836	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	157135125	157136383	2	-1.2285
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	157141442	167483561	7717	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	167500598	167509025	8	0.7545
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	167521501	192714857	16751	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	192718034	192721641	2	2.3864
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	192723639	194998709	1457	-0.0166
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	195005246	195089940	94	-0.3981
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	195090236	197374325	1377	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	197377986	197379094	6	-0.751
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	197379147	205764453	5504	-0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	205779471	205797997	3	1.1029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	205801489	220433291	10554	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	220441457	220443627	2	-3.2282
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	220448757	234233214	9145	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	234238211	234238224	2	-1.3663
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	234239133	238458363	3431	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	238460638	238460747	5	-1.6347
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	238460762	247191011	5934	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	2	2784	24452753	17946	0.0083
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	2	24455015	24464632	20	-0.4704
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	2	24465231	29545291	2757	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	2	29545450	29545464	2	-1.6068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	2	29545726	34544573	3389	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	2	34552819	34581371	44	-0.3328
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	2	34590017	35829477	880	-0.0131
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	2	35831294	35841420	6	-1.6696
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	2	35841451	52607972	12167	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	2	52607984	52635046	39	-2.4567
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	2	52641453	87366798	22132	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	2	87367890	87367901	2	-1.5463
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	2	87373867	105753297	7125	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	2	105755344	105757770	6	-0.8862
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	2	105758345	113865530	4242	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	2	113870114	113881879	7	-0.9178
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	2	113883432	129354548	9635	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	2	129354948	129356785	15	-0.6553
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	2	129356799	183793698	33379	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	2	183794033	183797969	9	-0.8673
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	2	183802243	242738129	36279	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	3	35345	3128069	2753	-0.0402
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	3	3128143	3128520	3	-1.2959
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	3	3129083	6620601	3091	-0.0101
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	3	6621543	6628332	24	-0.6912
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	3	6630078	26576768	14198	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	3	26586501	26586889	7	-0.7506
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	3	26586902	26588205	8	0.1652
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	3	26589978	26589989	8	-0.7867
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	3	26590953	46024712	12687	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	3	46024840	46026717	2	-2.275
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	3	46026747	55545992	4961	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	3	55546557	55546970	4	-1.2172
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	3	55549860	146961813	54708	-0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	3	146961925	146962252	2	-2.3305
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	3	146963455	164013564	10538	-0.0058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	3	164015644	164023184	7	1.7355
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	3	164028410	174719597	6417	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	3	174723329	174782887	25	0.3887
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	3	174783512	194357441	12805	-0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	3	194360596	194365597	20	0.9053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	3	194369129	198310821	2170	0.0199
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	3	198311086	198314926	3	-1.1947
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	3	198315252	199380515	534	-0.0136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	4	2281	9066075	5249	0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	4	9070328	9095185	10	-0.8618
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	4	9105392	9823258	546	-0.0176
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	4	9832514	9840596	28	-1.8618
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	4	9843312	32037972	15654	-0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	4	32044449	32045411	5	-1.3098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	4	32049212	34462895	1349	-0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	4	34463350	34506344	41	0.4838
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	4	34506399	64375574	16586	-0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	4	64376535	64388380	22	-0.8333
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	4	64390176	64390853	8	-2.5606
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	4	64399026	122501423	35060	-0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	4	122501918	122504585	28	-0.7269
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	4	122510581	153009236	17778	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	4	153010983	153012017	12	-0.9392
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	4	153012341	172605106	12573	-0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	4	172605921	172614019	9	-1.0924
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	4	172614033	189458252	11358	-0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	4	189458354	189458433	4	1.3857
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	4	189459807	190426037	787	-0.0359
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	4	190432112	190436258	4	-2.9332
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	4	190436765	190779808	197	-0.0456
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	4	190779872	190885717	39	-0.3914
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	4	190888499	191261904	150	0.0277
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	5	68532	738748	308	0.0781
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	5	751371	826568	29	0.5007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	5	832860	905566	30	-0.4176
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	5	916797	5429666	3777	0.0173
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	5	5429984	5430634	2	-1.8424
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	5	5431823	21485033	11636	-0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	5	21486957	21488195	5	-1.284
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	5	21488253	180323908	97177	-0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	5	180330877	180331979	2	-2.1445
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	5	180335370	180722926	183	0.0169
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	6	94661	198861	99	0.0245
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	6	199267	265872	32	-0.5046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	6	267696	268084	2	-2.353
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	6	268326	21914999	16565	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	6	21916459	21920221	2	-1.3177
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	6	21922476	29944615	5039	0.0099
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	6	29944682	29945051	3	-0.5271
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	6	29945166	29982787	24	0.9588
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	6	29984938	32557501	1182	0.0227
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	6	32560779	32758590	68	-0.5758
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	6	32762618	72919646	23190	-0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	6	72923245	72923593	2	-2.1049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	6	72925284	79019608	3866	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	6	79025784	79091904	112	0.2895
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	6	79095953	170892930	59784	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	7	52911	22401305	16106	-0.0075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	7	22401997	22403012	2	-2.7377
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	7	22405279	38353316	11454	-0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	7	38353337	38371496	11	-0.5061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	7	38371622	54353999	11009	-6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	7	54354003	54354011	5	-1.8508
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	7	54360982	56728994	1572	-0.0108
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	7	56729607	56736308	3	-2.6406
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	7	56739660	57538469	332	0.046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	7	57540053	57540580	3	-1.9541
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	7	57540651	64231500	1230	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	7	64231776	64288784	9	-0.9894
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	7	64289075	141509474	45767	-5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	7	141510639	141510968	2	-2.7196
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	7	141512971	142154515	405	-0.0368
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	7	142156294	142159107	6	-3.3804
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	7	142159241	142165422	19	-1.568
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	7	142165554	143527185	843	0.0184
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	7	143535212	143697880	43	-0.7202
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	7	143705862	158819765	9699	0.0124
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	8	21254	2067696	1485	0.0291
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	8	2067801	2068760	6	-0.8657
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	8	2068779	18309434	15264	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	8	18310437	18315465	4	-1.6023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	8	18315667	25030360	5091	0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	8	25030393	25040250	26	-0.3316
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	8	25047021	39349816	9033	-0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	8	39354760	39506122	59	0.7127
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	8	39507456	112363822	42067	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	8	112363846	112364421	5	-1.7155
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	8	112364436	118938107	3936	-0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	8	118938531	118944498	2	-1.5522
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	8	118945304	144763476	18480	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	8	144764993	144776418	8	0.5681
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	8	144777888	146268959	512	0.0735
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	9	36587	23351805	20462	-0.0083
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	9	23353115	23363484	8	-2.3559
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	9	23368488	43156984	10915	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	9	43159599	44124652	60	-0.2528
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	9	44132216	44409324	32	0.1488
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	9	44569219	44795733	37	-1.2252
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	9	44806024	140211215	48426	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	10	62759	46111165	31589	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	10	46111486	46839717	175	-0.399
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	10	47011195	48391956	487	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	10	48457816	48522382	4	0.8431
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	10	48548797	48665901	9	-1.287
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	10	48702225	66976282	12484	-0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	10	66977929	66984436	27	-1.6443
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	10	66984452	89019223	14486	-0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	10	89028321	89059776	3	1.1806
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	10	89060725	113947110	16234	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	10	113948002	113953808	6	-0.8461
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	10	113956476	135237857	15569	0.0106
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	10	135237865	135356694	35	-0.9071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	188510	5477551	3061	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	5478727	5478986	4	-1.2855
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	5479104	5739535	235	0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	5739552	5766037	41	-0.2813
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	5768936	6064366	239	-0.0103
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	6064845	6078670	8	-1.1029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	6079079	18897432	9179	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	18897446	18918564	58	-0.9451
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	18918592	48554998	20622	-0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	48558010	48559252	2	-1.6584
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	48562894	50569989	821	0.0198
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	50591535	51084088	38	0.375
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	51084159	55132599	371	-0.0153
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	55132812	55209553	53	-0.3802
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	55209585	82528499	15527	0.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	82536755	82538363	3	-1.375
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	82540401	91470137	5857	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	91470306	91470691	2	1.7226
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	91472352	125741524	24290	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	125742691	125755630	10	-0.8053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	125763272	134449982	6755	0.0126
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	12	20703	9352495	6125	0.016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	12	9359076	9363632	2	-2.3135
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	12	9363910	9525137	81	-0.0379
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	12	9529176	9619559	23	-1.5034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	12	9626236	31156324	15259	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	12	31160565	31298390	92	0.501
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	12	31301146	33185927	1303	0.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	12	33192673	33198641	27	-2.9473
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	12	33199627	44190705	5626	-0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	12	44192107	44195804	3	-2.1572
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	12	44199559	130686668	55976	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	12	130698537	130699288	13	-2.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	12	130708284	132288262	572	0.0531
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	13	17924949	19333289	705	-0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	13	19338845	19339761	2	-1.457
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	13	19342249	19718781	201	0.0186
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	13	19725251	19725940	2	-2.9379
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	13	19730547	36973965	12665	0.006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	13	36974267	36982757	12	0.6431
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	13	36986330	114126499	50740	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	14	18072124	18947072	67	0.0263
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	14	18979264	19492423	119	-0.5272
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	14	19493212	22164685	1984	-0.0278
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	14	22164842	22169049	6	-0.8439
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	14	22169230	34579354	7872	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	14	34579399	34579525	3	-1.4874
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	14	34580548	69087800	21656	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	14	69088121	69092220	8	-0.8394
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	14	69092466	73076460	2628	-0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	14	73076604	73087274	5	-1.4641
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	14	73087291	89617784	10944	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	14	89618727	89620145	3	-1.3291
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	14	89620544	105531947	9852	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	14	105550720	105553341	4	-1.0898
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	14	105558085	105822329	120	-0.0639
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	14	105824904	105824912	3	0.9747
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	14	105825048	105939331	52	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	14	105939599	105989153	54	-0.5077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	14	105989694	106224218	134	0.0204
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	14	106231370	106247258	14	0.5152
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	14	106248976	106356482	76	-0.0337
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	15	18276341	18846759	114	-0.1095
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	15	18846926	19781841	193	-0.7573
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	15	19786318	74678296	34054	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	15	74678566	74679096	8	0.993
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	15	74679248	74682830	13	0.5855
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	15	74689234	100286563	17693	0.0079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	777	19851864	13534	0.0204
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	19853151	19873376	28	-0.6129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	19874863	22349475	1295	0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	22349521	22625887	78	-0.4033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	22626439	32151974	5182	0.0096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	32151985	32782897	110	-0.2785
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	32783298	33208395	29	0.1111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	33212130	33532809	86	-0.4077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	33535327	34675377	417	-0.0351
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	34677326	34692596	3	1.0166
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	34693300	53121474	5511	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	53122623	53122639	2	-1.423
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	53122962	54354095	1062	-0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	54355723	54356280	3	3.5135
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	54361849	54379945	15	0.7506
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	54387058	76930838	14518	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	76931265	76942938	14	0.7496
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	76942983	80739646	4145	0.0099
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	80740904	80741499	2	1.4392
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	80742019	88815036	6495	0.0328
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	17	526	41719947	23640	0.0134
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	17	41750187	42107462	47	-0.502
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	17	42107479	78643088	21620	0.0086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	18	1543	76116029	50823	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	19	41910	60974181	27507	0.0127
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	19	60974347	60974841	2	-1.9016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	19	60974879	63789666	1850	0.0217
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	20	9305	1515454	1209	0.03
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	20	1515653	1519103	11	-0.6868
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	20	1519272	1530207	22	-0.1737
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	20	1538257	1541893	5	-1.4584
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	20	1545946	24210650	17687	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	20	24213651	24231642	13	-0.5303
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	20	24232301	48587859	13473	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	20	48587910	48588036	4	-1.1502
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	20	48588511	62426597	10081	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	21	9758742	9988931	52	-0.2261
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	21	9989530	10024430	20	-0.5755
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	21	10024517	27202384	9951	-0.0087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	21	27204531	27204723	3	-1.9065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	21	27205475	45646185	13656	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	21	45646693	45884750	123	0.2509
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	21	45891622	46921385	609	0.0428
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	22	14432528	14438854	4	0.2551
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	22	14441342	14616196	23	-0.3831
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	22	14616204	24066345	5491	0.0432
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	22	24066672	24066676	4	0.9841
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	22	24066677	28200258	3471	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	22	28200312	28211717	5	0.9357
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	22	28211801	41227226	8436	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	22	41229384	41280435	24	0.4724
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	22	41285375	49581321	6108	0.0157
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	X	108477	76266264	40151	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	X	76270041	76440325	18	-0.6966
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	X	76461534	115051983	20670	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	X	115052431	115064666	6	-1.832
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	X	115070447	153220619	23166	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	X	153220813	153240669	30	0.301
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	X	153240893	153241806	8	0.6783
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	X	153247372	154835548	577	0.0166
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	Y	2710438	3065268	152	-2.8787
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	Y	3066140	5999989	619	-2.3941
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	Y	6003672	6177910	73	-2.8494
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	Y	6180432	6373572	86	-3.8524
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	Y	6375579	7371786	417	-2.8251
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	Y	7376344	10385211	1243	-3.1188
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	Y	10394949	14099670	949	-2.85
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	Y	14099736	14103917	3	-7.6439
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	Y	14104283	17543786	1822	-2.9745
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	Y	17547696	17807379	113	-3.4584
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	Y	17809644	18080026	142	-2.8938
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	Y	18080874	18143853	38	-4.0279
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	Y	18145777	19301261	541	-3.4462
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	Y	19301619	19484001	94	-3.9576
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	Y	19484450	22268551	1084	-2.9924
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	Y	22268856	25725360	687	-3.4887
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	Y	25776875	26127308	90	-2.7707
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	Y	26127580	26681504	197	-3.5382
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	Y	26687080	26731407	14	-5.1087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	Y	26731471	26833326	43	-3.5945
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	Y	26847504	57427647	183	-2.625
