Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	3208470	245880329	129060	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	2	474222	29545291	17824	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	2	29545450	29545464	2	-1.6068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	2	29545726	242124735	113428	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	3	526235	55545992	30835	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	3	55546557	55546970	4	-1.2172
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	3	55549860	199023074	75523	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	4	1043934	189836143	102706	-6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	5	967233	180293075	100476	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	6	959281	170745844	96445	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	7	671810	75276699	38139	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	7	75276716	75277632	2	-1.5038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	7	75279698	158077879	43154	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	8	607667	145304484	81511	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	9	779932	140058573	68006	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	10	405240	113947110	67035	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	10	113948002	113953808	6	-0.8461
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	10	113956476	135075077	13803	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	446120	82528499	44223	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	82536755	82538363	3	-1.375
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	82540401	125741524	27652	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	125742691	125755630	10	-0.8053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	125763272	133647740	5354	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	12	760163	131671419	73933	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	13	18348806	114005560	56634	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	14	19571208	89617784	40245	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	14	89618727	89620145	3	-1.3291
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	14	89620544	105059083	9189	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	15	21238778	99701830	44520	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	593460	53121474	19130	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	53122623	53122639	2	-1.423
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	53122962	68410884	9344	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	68412174	68416068	3	-1.1968
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	68416471	87907437	12379	-6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	17	933971	78510305	36980	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	18	319586	75210228	42648	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	19	235018	63570038	23945	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	20	403764	48587859	28357	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	20	48587910	48588036	4	-1.1502
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	20	48588511	61690281	8915	-0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	21	14269492	46503202	20580	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	22	15803930	47717016	16922	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	X	3167107	154558783	63769	0.0017
