Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	1	3218610	247813706	129116	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	2	484222	29691787	17822	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	2	29691946	29691960	2	-1.6068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	2	29692222	242476062	113422	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	3	2212571	55570952	30835	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	3	55571517	55571930	4	-1.2172
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	3	55574820	197538677	75517	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	4	1053934	188763651	102711	-6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	5	914233	180360469	100476	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	6	1014281	170903919	96454	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	7	705284	75438763	38139	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	7	75438780	75439696	2	-1.5038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	7	75441762	158385118	43155	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	8	617667	145232496	81518	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	9	789932	140938752	68018	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	10	415240	113957120	67033	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	10	113958012	113963818	6	-0.8461
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	10	113966486	135225087	13803	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	456120	82850851	44219	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	82859107	82860715	3	-1.375
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	82862753	126236314	27646	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	126237481	126250420	10	-0.8053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	11	126258062	134142530	5354	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	12	889902	133161346	73928	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	13	19450806	114987458	56630	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	14	20501368	90548031	40243	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	14	90548974	90550392	3	-1.3291
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	14	90550791	105988038	9189	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	15	23687685	101884307	44518	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	653459	54563973	19130	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	54565122	54565138	2	-1.423
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	54565461	69853383	9344	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	69854673	69858567	3	-1.1968
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	16	69858970	89379936	12313	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	17	987221	80917016	36980	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	18	329586	77109240	42645	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	19	284018	58878226	23945	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	20	455764	49154452	28360	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	20	49154503	49154629	4	-1.1502
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	20	49155104	62219837	8915	-0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	21	15347621	47678774	20579	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	22	17423930	49331012	16921	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_G12_896522	X	3157107	154905589	63786	0.0017
