Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	51598	22193102	12237	0.0098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	22195744	22210712	7	-1.3074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	22214976	34864261	6913	0.0073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	34875241	34877078	20	-0.6131
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	34886855	72541086	23773	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	72541504	72583736	46	-1.2613
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	72584492	89247843	10976	0.01
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	89250546	89250793	2	-3.0135
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	89254112	103957166	9095	-5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	103957254	103958859	5	-0.9207
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	103959832	103960907	3	-3.1495
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	103965022	104069745	27	-0.6447
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	104104926	108531282	2875	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	108535758	108536400	2	-4.7199
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	108539019	110029038	725	0.022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	110034497	110044476	18	1.1671
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	110046521	112491849	1955	-0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	112497488	112507479	26	-0.3531
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	112507583	147303148	6379	0.0212
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	147306690	147682590	157	-0.5133
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	147688141	150822151	1499	0.0191
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	150822330	150852862	31	2.6142
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	150852902	150853218	4	1.1279
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	150857118	151026302	171	0.0606
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	151028547	151035324	37	0.619
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	151040529	220433291	47083	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	220441457	220443627	2	-3.2401
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	220448757	225131343	2807	0.013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	225136300	225138015	2	-1.6416
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	225138583	227877792	1637	0.0091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	227883479	227886819	3	-2.6898
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	227887079	241110904	10199	-5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	241110930	241246105	88	0.2796
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	241246203	247191011	3769	0.0132
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	2	2784	4183562	2986	0.022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	2	4191739	4201042	36	-0.5605
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	2	4201387	14621145	8018	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	2	14622400	14627472	11	-1.1096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	2	14627543	32379556	11503	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	2	32384612	32385446	2	-1.4955
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	2	32392740	34536794	1541	0.0211
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	2	34538784	34591536	50	0.4762
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	2	34594143	129354948	56212	0.0105
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	2	129354972	129356785	14	-0.942
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	2	129356799	146580899	10482	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	2	146580913	146583404	22	-1.8884
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	2	146594276	242738129	59136	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	3	35345	1231380	1001	0.0481
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	3	1231760	1231766	2	-3.5901
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	3	1231852	36258735	25554	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	3	36258961	36260034	3	-2.4104
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	3	36260283	37952421	1117	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	3	37957112	37961811	16	-0.8728
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	3	37961887	52998251	8080	0.0079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	3	53003415	53014156	37	-0.577
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	3	53014257	100420474	28001	0.0094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	3	100427148	100432111	38	0.5
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	3	100433654	131246388	18742	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	3	131249276	131288926	51	0.6005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	3	131289614	137262106	3939	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	3	137266317	137272938	2	-1.3236
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	3	137273909	137501789	94	0.0201
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	3	137505641	137508116	2	-2.6304
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	3	137521231	174718577	22684	0.0112
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	3	174719597	174772374	25	0.6046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	3	174782887	190843448	10289	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	3	190846372	190847332	11	-0.913
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	3	190853682	194360596	2497	0.0114
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	3	194360656	194365597	19	-1.2447
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	3	194369129	199380515	2705	0.027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	4	2281	69057550	42366	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	4	69057755	69168574	63	0.4627
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	4	69171930	115393149	27739	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	4	115394772	115401624	23	0.831
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	4	115403678	138311870	13255	0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	4	138311966	138314422	15	-0.5806
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	4	138314571	191261904	34007	0.0123
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	5	68532	12853889	10215	0.0126
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	5	12868780	12891533	14	-1.1745
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	5	12902201	15771492	1977	0.0115
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	5	15772222	15773597	11	-0.6625
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	5	15776346	46231871	18565	0.011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	5	46235191	46235192	2	-1.5792
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	5	46245056	46287063	13	0.0337
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	5	46306765	46309259	8	0.9591
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	5	46313969	57364872	5084	0.0119
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	5	57365287	57369290	28	-0.3884
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	5	57374114	113352169	33238	0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	5	113354904	113363288	11	-0.8062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	5	113364867	151494364	24409	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	5	151495579	151498544	14	-3.1606
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	5	151500464	155407683	2661	-0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	5	155409350	155415307	14	-2.2754
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	5	155427828	180307090	16637	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	5	180307129	180349813	16	0.6189
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	5	180350220	180722926	175	0.0873
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	6	94661	5511375	4488	0.0153
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	6	5511771	5528524	12	-1.3358
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	6	5532548	7363239	1523	-0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	6	7370257	7372349	3	-1.4603
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	6	7372460	29945051	15711	0.011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	6	29945166	30024465	44	0.3382
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	6	30024484	32560907	1164	0.0561
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	6	32562253	32678343	32	1.5113
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	6	32681749	32798005	78	0.2796
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	6	32798775	32798808	3	2.9061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	6	32798923	54039110	13696	0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	6	54039189	54039814	6	1.2519
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	6	54043307	66450069	5054	0.0169
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	6	66450811	66460573	25	-0.6992
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	6	66463848	74648586	5440	0.0105
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	6	74648953	74660283	11	0.7906
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	6	74660333	77493251	1768	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	6	77496587	77509101	15	-3.8039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	6	77509111	77509476	6	-1.3504
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	6	77517792	79019300	976	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	6	79019345	79083847	104	0.3317
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	6	79083964	103841522	15499	0.014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	6	103844669	103868742	45	-1.2181
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	6	103868754	170892930	44236	0.006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	7	52911	16663963	11435	0.0155
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	7	16666972	16668369	10	-1.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	7	16676233	64206287	30267	0.0094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	7	64231500	64232539	4	-1.1744
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	7	64232553	109221034	25652	0.012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	7	109224328	109225008	15	-0.7947
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	7	109225010	109228448	9	0.1785
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	7	109228480	109241146	11	-2.1579
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	7	109241218	125832210	10038	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	7	125832718	125834112	13	-1.0664
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	7	125834113	133435717	4704	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	7	133435735	133440983	23	-1.8941
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	7	133446174	141409593	5209	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	7	141416112	141434115	33	-0.4794
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	7	141434368	142154515	459	-0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	7	142156294	142159107	6	-3.2432
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	7	142159241	142165340	17	-1.4549
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	7	142165354	142165614	4	-3.0383
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	7	142165684	142928980	471	0.0121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	7	142929090	143163931	91	0.3376
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	7	143174784	158819765	10018	0.0185
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	8	21254	243531	99	0.0837
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	8	248508	252087	8	-1.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	8	252188	585875	228	0.0939
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	8	585892	585908	2	4.0822
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	8	591043	2689341	1783	0.038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	8	2690940	2691306	7	-1.2191
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	8	2694578	7203136	5712	0.0375
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	8	7203152	7836261	166	-0.4607
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	8	7836800	11932654	3293	0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	8	11972069	12072406	10	-0.7106
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	8	12207108	14727278	2277	0.0134
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	8	14727349	14727527	2	-1.9412
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	8	14729434	25030439	8258	0.009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	8	25030494	25047021	25	0.6566
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	8	25047044	112360670	51129	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	8	112363455	112364436	10	1.3156
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	8	112369457	115701219	1825	0.0096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	8	115703663	115704877	13	-0.808
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	8	115707526	115710248	13	-0.098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	8	115710312	115710907	9	-0.9234
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	8	115719873	146268959	21070	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	9	36587	582306	481	0.0539
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	9	582552	582567	2	-1.4863
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	9	582718	592903	28	-0.0169
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	9	596699	596961	4	-1.7986
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	9	597307	67673801	31136	0.0153
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	9	67675871	67675879	5	1.7652
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	9	67678160	140211215	48242	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	10	62759	24415269	19237	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	10	24417680	24418060	11	0.9413
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	10	24418914	58182861	19328	0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	10	58186381	58196843	41	-0.716
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	10	58202758	66976282	6114	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	10	66977929	66984407	26	0.5881
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	10	66984436	81452221	9272	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	10	81486935	81487784	2	-1.6384
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	10	81497207	135356694	37038	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	188510	4923972	2477	0.0141
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	4924226	4933468	43	0.5935
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	4933483	5746317	790	0.0297
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	5746445	5765914	28	-0.5562
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	5766037	18897446	9423	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	18905648	18928728	72	0.3445
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	18928936	25175687	4946	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	25175721	25177588	2	-1.5953
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	25180829	49656143	16089	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	49657894	49715563	27	-0.617
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	49716131	51040151	378	0.0421
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	51040270	51051627	4	-0.9719
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	51061717	55132856	384	0.0585
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	55133074	55209553	50	-0.4476
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	55209585	60722052	3409	0.0075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	60741036	60757070	2	-1.5028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	60772382	83345830	12620	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	83345833	83347968	2	-2.4502
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	83347973	89169255	3888	0.0101
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	89175116	89189872	7	-0.9639
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	89207189	92573981	2303	0.0095
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	92575810	92578132	3	-3.2825
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	92581401	92660131	39	-0.0138
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	92660891	92669109	2	-3.3199
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	92670101	101099594	6359	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	101103070	101103174	4	1.2503
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	101103422	126181599	17359	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	126181724	126182406	2	-1.5381
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	126183856	134449982	6407	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	12	20703	10471727	6862	0.0166
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	12	10474634	10487073	5	-1.0364
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	12	10487987	30126848	13712	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	12	30130534	30134842	19	-0.6482
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	12	30134857	70563344	24070	0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	12	70563769	70569546	2	-1.5513
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	12	70575029	84619722	8642	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	12	84619985	84620042	2	-1.2556
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	12	84620182	89007478	2494	-0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	12	89007481	89016205	8	0.7988
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	12	89017688	132288262	29243	0.0073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	13	17924949	31430622	9643	0.0145
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	13	31430727	31436423	17	-0.9427
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	13	31438047	36970036	3905	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	13	36970224	36982757	15	-2.2552
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	13	36986330	56558758	12492	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	13	56561007	56571831	11	-1.013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	13	56574365	57482791	488	0.031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	13	57488282	57495031	6	-1.2204
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	13	57500053	63122206	3382	-0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	13	63122793	63134693	9	-0.9276
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	13	63137564	104219680	27420	0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	13	104223256	104245794	21	-1.1041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	13	104246868	114126499	6894	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	14	18072124	18452209	24	0.1333
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	14	18452344	19487701	159	-0.4636
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	14	19488797	21605911	1478	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	14	21607217	22040167	390	-0.2613
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	14	22040287	106356482	53523	0.0069
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	15	18276341	18529787	57	0.0479
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	15	18544080	20088324	363	0.7168
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	15	20088838	32481928	7391	0.0244
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	15	32482614	32668873	93	0.2733
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	15	32668958	74678566	26444	0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	15	74678682	74682399	13	-2.4187
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	15	74682822	74682830	7	-1.0465
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	15	74689234	100286563	17683	0.0079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	16	777	52015518	25295	0.0201
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	16	52026888	52026964	2	-1.3387
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	16	52027308	54354095	2028	0.0101
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	16	54355723	54356280	3	2.2996
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	16	54361849	54379945	15	0.63
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	16	54387058	88815036	25162	0.0112
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	17	526	2258379	1157	0.0396
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	17	2259104	2259124	4	0.9915
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	17	2263278	6499386	2611	0.0123
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	17	6499942	6504020	2	-1.6175
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	17	6504863	16678885	6745	0.0169
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	17	16680995	16682253	3	1.3557
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	17	16682509	18260587	918	0.0143
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	17	18296117	18405946	29	0.6319
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	17	18409922	31460821	6922	0.0172
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	17	31461241	31509204	37	0.5861
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	17	31552238	32850281	691	0.0223
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	17	32853232	32853752	2	-1.8802
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	17	32859592	36676540	1854	0.0075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	17	36676552	36676831	9	1.8092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	17	36676846	36683683	10	0.7313
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	17	36683699	36683976	3	2.8138
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	17	36684057	41568205	2548	0.0126
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	17	41568981	42107462	137	0.3333
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	17	42107479	78643088	21612	0.0101
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	18	1543	40228013	25223	0.0087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	18	40228816	40232623	7	-1.0183
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	18	40236669	54081530	9532	-0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	18	54081842	54086942	23	-0.8872
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	18	54089919	76116029	16029	0.0132
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	19	41910	56834164	24956	0.0123
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	19	56834427	56840009	10	-0.7186
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	19	56846717	63789666	4381	0.0193
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	9305	1508999	1205	0.0273
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	1509580	1541893	41	2.2925
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	1545946	21806551	15769	0.0092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	21811229	21815300	3	-1.2674
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	21823728	26179998	3006	0.0096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	26180228	28262642	89	0.2247
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	28262658	33456505	2036	-0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	33458746	33460407	2	-2.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	33463315	62426597	20337	0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	21	9758742	46921385	24406	0.0118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	22	14432528	14619362	29	-0.3367
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	22	14619487	20803918	3271	0.0508
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	22	20804023	20804613	5	-2.7791
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	22	20811498	21082462	341	0.0483
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	22	21082680	21082880	4	1.0539
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	22	21087321	21592981	269	0.0785
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	22	21593242	21593257	2	-2.4276
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	22	21593274	22601679	665	0.0509
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	22	22601692	22662933	32	0.5112
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	22	22667307	22674422	3	-0.1917
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	22	22680529	22726814	19	-2.0159
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	22	22731529	23994801	824	0.0104
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	22	23994832	24248709	290	-0.8934
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	22	24252342	27982158	3097	0.006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	22	27983409	27983419	2	-1.3229
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	22	27983706	41222383	8566	0.009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	22	41222526	41285375	28	0.5284
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	22	41285732	49581321	6102	0.0256
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	X	108477	39517086	24760	0.0157
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	X	39517617	39518762	4	-2.2009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	X	39518934	40450201	475	0.0325
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	X	40450393	40450788	2	-4.643
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	X	40456357	104466477	29772	0.0144
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	X	104467059	104474349	7	-2.6051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	X	104474478	154835548	29403	0.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	Y	2710438	21233259	6905	-0.973
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	Y	21234599	21253618	11	-1.6962
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	Y	21254208	57427647	1674	-0.9579
