Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	3208470	225131343	115686	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	225136300	225138015	2	-1.6416
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	225138583	245880329	13288	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	2	474222	32379556	19624	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	2	32384612	32385446	2	-1.4955
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	2	32392740	198464076	85390	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	2	198466946	198469586	3	-1.2636
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	2	198470787	242124735	26178	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	3	526235	199023074	106306	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	4	1043934	189836143	102682	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	5	967233	180293075	100432	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	6	959281	170745844	96414	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	7	671810	158077879	81271	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	8	607667	145304484	81476	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	9	779932	140058573	67969	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	10	405240	135075077	80812	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	446120	126181599	72182	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	126181724	126182406	2	-1.5381
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	126183856	133647740	5006	-0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	12	760163	70563344	38515	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	12	70563769	70569546	2	-1.5513
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	12	70575029	131671419	35382	-0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	13	18348806	114005560	56615	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	14	19571208	105059083	49414	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	15	21238778	99701830	44496	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	16	593460	87907437	40844	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	17	933971	6499386	2719	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	17	6499942	6504020	2	-1.6175
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	17	6504863	9563269	1601	0.0104
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	17	9565517	9566480	2	-1.4684
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	17	9569299	78510305	32644	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	18	319586	75210228	42638	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	19	235018	63570038	23935	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	403764	10800325	6481	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	10800999	10801510	2	-1.148
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	10801777	21806551	7804	0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	21811229	21815300	3	-1.2674
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	21823728	33456505	4533	-0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	33458746	33460407	2	-2.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	33463315	51155088	11281	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	51156172	51158572	3	-1.0813
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	51160316	56202318	3719	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	56202490	56202771	2	-1.2405
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	56204575	61690281	3432	0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	21	14269492	23904201	5733	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	21	23905229	23906170	2	-1.4253
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	21	23908457	30055046	4329	0.0099
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	21	30058200	30059808	3	-1.2335
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	21	30062624	41790001	8118	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	21	41790065	41790083	2	-1.4872
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	21	41790207	46503202	2387	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	22	15803930	27982158	4607	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	22	27983409	27983419	2	-1.3229
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	22	27983706	47717016	12303	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	X	3167107	39517086	16361	0.014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	X	39517617	39518762	4	-2.2009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	X	39518934	40450201	475	0.0308
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	X	40450393	40450788	2	-4.643
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	X	40456357	154558783	46773	0.0092
