Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	3218610	227064720	115744	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	227069677	227071392	2	-1.6416
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	1	227071960	247813706	13286	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	2	484222	32526052	19622	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	2	32531108	32531942	2	-1.4955
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	2	32539236	198755831	85383	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	2	198758701	198761341	3	-1.2636
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	2	198762542	242476062	26179	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	3	2212571	197538677	106300	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	4	1053934	188763651	102687	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	5	914233	180360469	100432	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	6	1014281	170903919	96423	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	7	705284	158385118	81272	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	8	617667	145232496	81483	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	9	789932	140938752	67981	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	10	415240	135225087	80810	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	456120	126676389	72172	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	126676514	126677196	2	-1.5381
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	11	126678646	134142530	5006	-0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	12	889902	72277077	38510	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	12	72277502	72283279	2	-1.5513
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	12	72288762	133161346	35382	-0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	13	19450806	114987458	56611	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	14	20501368	105988038	49412	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	15	23687685	101884307	44494	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	16	653459	89379936	40778	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	17	987221	6558662	2719	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	17	6559218	6563296	2	-1.6175
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	17	6564139	9622544	1601	0.0104
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	17	9624792	9625755	2	-1.4684
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	17	9628574	80917016	32644	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	18	329586	77109240	42635	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	19	284018	58878226	23935	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	455764	10852325	6484	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	10852999	10853510	2	-1.148
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	10853777	21858551	7804	0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	21863229	21867300	3	-1.2674
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	21875728	33993091	4533	-0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	33995332	33996993	2	-2.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	33999901	51721681	11281	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	51722765	51725165	3	-1.0813
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	51726909	56768912	3719	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	56769084	56769365	2	-1.2405
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	20	56771169	62219837	3432	0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	21	15347621	24982330	5733	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	21	24983358	24984299	2	-1.4253
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	21	24986586	31133175	4330	0.0098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	21	31136329	31137937	3	-1.2335
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	21	31140753	42868131	8117	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	21	42868195	42868213	2	-1.4872
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	21	42868337	47678774	2386	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	22	17423930	29652158	4607	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	22	29653409	29653419	2	-1.3229
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	22	29653706	49331012	12302	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	X	3157107	39632142	16361	0.0139
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	X	39632673	39633818	4	-2.2009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	X	39633990	40565257	475	0.0308
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	X	40565449	40565844	2	-4.643
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H01_896542	X	40571413	154905589	46790	0.0092
