Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	51598	88451	16	-0.6606
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	88465	16972817	8808	0.01
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	16973464	17134834	74	-0.4415
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	17148828	25455878	5270	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	25455928	25534088	30	0.604
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	25534592	34428971	4632	0.0107
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	34429399	34429890	2	-1.5837
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	34434239	34875241	337	-0.0107
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	34875257	34877078	19	-0.5715
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	34886855	46282940	6342	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	46284862	46286413	2	1.5908
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	46292140	72522941	17440	0.0081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	72528701	72535958	9	-1.0454
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	72541006	72584492	49	0.5689
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	72585028	81661044	5788	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	81661190	81661193	2	1.5687
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	81661255	83613577	1331	-0.0069
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	83622946	83626896	4	0.9964
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	83629841	104027091	12990	0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	104041212	104104926	14	-0.4971
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	104105024	110029038	3606	0.0176
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	110034497	110041701	17	1.4111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	110044476	111177743	841	-0.0098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	111178891	111189749	39	-0.7421
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	111193590	150822151	9147	0.0079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	150822330	150852862	31	1.8206
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	150852902	151028547	176	0.0304
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	151028563	151035194	35	0.7114
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	151035324	166031459	10225	0.0105
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	166032807	166033543	4	-1.2207
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	166035137	185982477	13349	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	185984183	185987992	2	-1.7235
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	185991233	192714857	4521	0.0122
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	192718034	192721641	2	1.5384
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	192723639	194994473	1454	0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	194997658	195068278	86	-0.3586
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	1	195068407	247191011	35975	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	2	2784	13447304	10191	0.0094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	2	13452427	13467123	6	1.035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	2	13467179	34564232	13923	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	2	34564314	34599961	47	0.5497
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	2	34602389	40842768	4638	0.0182
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	2	40843820	40844942	4	1.0443
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	2	40845310	50907506	7242	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	2	50908278	50912380	3	-1.0496
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	2	50914156	52608385	1160	0.0142
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	2	52612257	52634901	28	-0.5432
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	2	52634916	75720430	14913	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	2	75720855	75736164	17	0.4955
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	2	75736363	86791198	7025	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	2	86806581	86807365	2	-1.9947
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	2	86823917	127558707	20161	0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	2	127558794	127574233	11	0.7447
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	2	127574416	134772954	4199	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	2	134773145	134773340	2	2.0001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	2	134774727	236165111	62574	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	2	236167740	236196122	22	-1.076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	2	236197625	242738129	3911	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	3	35345	68828974	47875	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	3	68829136	68830054	11	0.6638
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	3	68830103	75651239	4941	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	3	75655239	75678936	8	0.7492
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	3	75691329	89754037	7889	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	3	89754349	89756830	6	-1.0496
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	3	89761289	126932216	19431	0.0097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	3	126932304	126941452	7	0.974
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	3	126945019	150445666	14444	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	3	150446085	150450811	25	-0.7356
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	3	150453770	162998291	7664	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	3	162998321	162998343	2	1.2921
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	3	162998638	164022703	698	-0.0152
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	3	164023167	164023184	2	-1.5748
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	3	164028410	165145040	635	-0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	3	165145065	165145611	6	-0.9662
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	3	165153142	194360596	18607	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	3	194360656	194365597	19	-1.158
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	3	194369129	196744161	1480	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	3	196744450	196941582	39	0.3541
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	3	196941595	199318116	1146	0.0251
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	3	199318142	199318155	2	-1.6119
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	3	199318195	199380515	40	0.1129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	2281	13224	13	-0.0435
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	15188	59713	49	-0.3254
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	61420	9088133	5194	0.0098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	9088304	9088443	2	1.7261
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	9095185	9802525	507	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	9802702	9854996	84	0.3012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	9855370	32044449	15638	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	32044463	32044497	3	1.1142
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	32045411	34462895	1350	-0.006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	34463350	34506267	38	-0.3153
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	34506308	39822629	3533	-0.0124
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	39823763	39841700	15	0.4247
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	39848451	40395330	337	-0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	40398768	40398949	3	-1.2124
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	40399444	48962605	5098	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	48985949	48986112	2	-1.8324
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	48991977	64376535	7601	0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	64380064	64390853	29	0.3955
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	64399026	69477123	2955	-0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	69485755	69512426	2	1.547
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	69571393	70155852	316	0.015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	70158099	70263213	51	0.2663
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	70263245	83452699	8097	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	83453393	83459727	2	-1.4189
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	83466612	104964184	12947	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	104964520	104971086	8	0.8722
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	104971093	138311689	19593	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	138311870	138312193	6	-0.8586
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	138312207	146714805	5321	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	146721206	146721342	2	-1.7299
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	146725178	162099591	9457	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	162099647	162104050	17	-0.5588
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	162104358	172605921	6678	0.0102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	172611459	172614019	8	-0.9471
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	172614033	173224432	400	-0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	173224503	173237396	17	0.6855
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	173238406	183967644	7254	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	183968731	183968738	2	1.6204
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	4	183972256	191261904	4867	0.0163
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	68532	8755522	6967	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	8756057	8800142	45	-0.8516
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	8802731	12838262	3206	0.0118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	12843869	12891533	18	0.8588
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	12902201	46306865	20584	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	46307687	46309259	6	-2.2792
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	46313969	49738505	100	0.0276
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	49740771	49744202	3	-1.0432
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	49744215	57357403	4979	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	57361784	57369290	32	1.7416
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	57374114	69269183	7311	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	69269200	70427009	19	0.4668
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	70689828	103879120	19546	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	103888272	103888503	4	1.2095
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	103888948	120074563	11122	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	120075046	120099754	24	0.4171
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	120102325	120725334	406	-0.0109
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	120728568	120731200	3	-1.085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	120733279	150182398	18279	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	150185693	150198797	8	-0.7909
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	150203580	151495579	966	0.0131
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	151495663	151500464	14	0.538
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	151500615	155407683	2662	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	155409350	155415307	14	-2.0216
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	155427828	171465202	11189	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	171465492	171466387	2	1.3713
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	171469278	173139959	1235	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	173141214	173141492	2	1.5889
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	173141606	180311494	4220	0.012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	180312809	180350517	16	0.781
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	5	180350709	180722926	172	0.033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	94661	199283	101	0.0408
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	202353	325821	100	0.8074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	326149	23013296	17422	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	23013332	23013782	2	-1.4332
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	23013811	29204012	3713	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	29214447	29269414	7	-0.692
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	29270819	29982787	419	0.0102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	29984938	30026566	28	-0.4581
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	30029053	30393384	175	0.0279
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	30393934	30409579	3	-1.4733
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	30414285	32560907	978	0.0468
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	32562253	32678024	31	1.4226
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	32678343	54039026	13782	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	54039043	54039814	8	1.9244
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	54043307	67058910	5459	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	67059168	67105350	60	-0.64
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	67106127	69710480	1832	0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	69713776	69717962	2	1.5471
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	69719088	72919646	2080	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	72923245	72923593	2	-2.0674
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	72925284	74648586	1088	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	74648953	74660283	11	0.7761
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	74660333	77493251	1768	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	77496587	77509360	18	-0.5483
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	77509392	79025784	983	0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	79025824	79091659	108	0.3553
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	79091746	103841522	15489	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	103844669	103868754	46	-1.0227
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	103872163	157699483	34812	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	157701252	157716064	3	1.4504
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	157716982	167514174	7303	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	167517235	167533253	10	-0.5647
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	167534094	170761420	2119	0.0138
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	6	170824252	170892930	4	-1.4484
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	7	52911	54347867	38580	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	7	54353999	54354011	6	1.8052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	7	54360982	61513579	2142	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	7	61525563	61799054	61	0.4782
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	7	61799127	64206287	937	0.011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	7	64231500	64300659	12	0.5274
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	7	64300673	69835213	3002	0.006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	7	69835430	69840611	7	-1.2417
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	7	69843389	87503175	9728	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	7	87508677	87510328	17	-0.6736
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	7	87510882	125832718	22977	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	7	125832792	125834113	13	0.8763
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	7	125834114	141417096	9948	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	7	141417391	141434115	22	-0.5872
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	7	141434368	154020828	7819	0.0104
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	7	154024104	154030546	4	-1.525
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	7	154031763	158819765	3247	0.01
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	21254	4155910	4188	0.0304
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	4156024	4156071	2	1.6736
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	4156372	5591394	1929	0.0338
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	5591415	5594564	6	0.8974
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	5594622	7174056	1708	0.0201
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	7181231	7237790	26	-0.467
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	7241701	7781474	111	-0.0418
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	7783389	7785109	4	-1.1684
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	7789458	8039791	87	-0.0147
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	8039818	8109713	14	-0.5618
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	8124554	11932654	3225	0.0158
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	11972069	12038532	8	-0.7634
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	12071716	12690760	211	-6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	12693099	12696897	4	-1.9908
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	12697904	32798257	15800	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	32798408	32811880	13	0.4775
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	32811898	39349340	3573	-5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	39349482	39506122	61	0.8215
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	39507456	40303707	599	-0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	40303899	40304007	2	1.1172
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	40304029	40891153	474	0.019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	40897009	40897628	2	-1.9794
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	40902837	65010273	12583	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	65010585	65012064	14	0.525
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	65012277	72378468	4248	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	72378580	72378692	2	-1.4043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	72378776	107317406	21080	-0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	107317922	107318609	2	1.48
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	107318735	112363642	3064	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	112363822	112364257	4	-0.8958
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	112364378	112364436	3	-2.7194
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	112369457	115703730	1828	0.0101
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	115703829	115710865	32	-0.4476
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	8	115710907	146268959	21077	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	9	36587	236397	81	0.0767
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	9	236702	236725	2	1.5308
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	9	239281	569853	385	0.0341
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	9	572866	583899	19	-1.0422
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	9	586826	41836811	30867	0.0102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	9	41882866	41975187	7	1.1365
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	9	42013107	44409324	113	-0.1924
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	9	44569219	44777523	35	-1.1868
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	9	44780914	95509918	18546	-8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	9	95510532	95510778	2	-2.2675
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	9	95512767	140211215	29879	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	10	62759	12203863	10222	0.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	10	12206003	12209518	2	1.4502
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	10	12217003	24415269	9023	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	10	24417680	24419013	14	0.9349
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	10	24419045	47241036	12694	0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	10	47417400	47468066	4	-1.6363
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	10	47480482	135356694	59149	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	188510	3443300	1349	0.0101
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	3444241	3445117	3	-1.2765
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	3463102	4924693	1128	-0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	4925086	4932848	30	0.6811
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	4932910	5478727	552	0.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	5478751	5478986	3	-0.9592
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	5479104	5740499	241	-0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	5743981	5765715	33	0.4974
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	5765914	18897432	9428	-0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	18897446	18917916	46	-0.3451
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	18917928	25175687	4974	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	25175721	25177588	2	1.3294
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	25180829	36920856	8366	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	36923836	36924274	2	-1.3962
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	36925579	48886497	7393	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	48886708	48886904	2	1.5511
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	48921309	49715563	364	0.0465
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	49716131	49716632	5	-0.9547
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	49717264	55119916	753	0.0361
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	55130608	55217259	61	0.3166
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	55217364	79645161	13300	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	79645196	79645212	2	-3.0158
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	79645334	81190057	1324	0.0122
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	81192975	81194753	4	-1.4571
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	81194806	84164365	1940	0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	84164651	84170883	2	1.5871
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	84171525	89188540	3370	0.0135
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	89189872	89207189	2	-1.3938
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	89220000	89399078	10	-0.0933
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	89416494	89443292	3	-1.0976
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	89447606	91470137	1428	-0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	91470306	91470691	2	2.8729
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	11	91472352	134449982	31058	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	12	20703	739459	420	0.0316
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	12	739524	744290	16	-0.8994
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	12	745615	9525137	5772	0.0132
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	12	9529176	9619559	23	-1.5365
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	12	9626236	11110690	1044	0.0097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	12	11111991	11132799	12	-1.1572
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	12	11143141	22139390	7459	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	12	22139436	22140494	14	-0.7519
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	12	22144199	31790142	7095	0.0115
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	12	31791817	31801175	13	-0.9112
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	12	31808487	33192673	1018	0.0086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	12	33192693	33198641	26	-0.5273
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	12	33199627	128443251	59689	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	12	128443394	128447423	13	0.549
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	12	128447878	129010806	494	0.0262
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	12	129013417	129016515	3	1.2389
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	12	129018884	132288262	1993	0.0231
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	13	17924949	50443055	22716	0.0083
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	13	50444912	50447199	2	2.1351
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	13	50447558	114126499	41613	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	14	18072124	18240412	17	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	14	18241044	18261718	2	2.064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	14	18343625	18472242	7	0.0435
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	14	18486191	18492533	3	1.3795
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	14	18502799	40680246	13807	0.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	14	40680440	40723727	12	-0.8119
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	14	40726999	45879032	2974	0.0213
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	14	45881685	45882211	2	1.3631
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	14	45882488	51473434	3508	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	14	51473848	51476250	5	-1.297
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	14	51476500	105618359	34836	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	14	105618552	105632486	9	-2.5905
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	14	105638145	105822329	85	0.0164
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	14	105824904	105824912	3	1.6998
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	14	105825048	105854089	15	-0.038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	14	105867070	105891789	10	0.7158
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	14	105892781	106224218	215	0.0132
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	14	106231370	106250892	21	-0.5446
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	14	106255229	106356482	69	-0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	15	18276341	18476969	49	-0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	15	18491920	20224763	373	0.4529
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	15	20232440	22220838	1005	0.0359
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	15	22225844	22312282	58	-0.4796
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	15	22314812	32507103	6335	0.0187
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	15	32507227	32618236	70	-0.5399
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	15	32643110	74665417	26472	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	15	74678296	74682830	22	0.8559
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	15	74689234	80692083	3659	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	15	80692417	80905894	11	-0.9285
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	15	80966604	91764239	7639	0.008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	15	91764901	91992334	219	-0.9499
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	15	91994204	100286563	6165	0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	16	777	6952473	4344	0.0278
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	16	6953201	6953569	2	1.6358
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	16	6955771	10919229	3897	0.0131
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	16	10920051	10920068	2	-1.3994
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	16	10920142	11439230	393	-0.0127
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	16	11441125	11478794	41	-0.8777
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	16	11484868	16203413	3106	0.0199
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	16	16237991	16463354	12	-0.9956
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	16	16475385	22498746	3068	0.0246
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	16	22510369	22609580	56	-0.4485
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	16	22609622	33149454	5329	0.0172
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	16	33208395	33330564	15	0.5783
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	16	33339661	54352549	7063	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	16	54352715	54379898	22	-0.3767
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	16	54379945	72937474	11294	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	16	72941759	73014102	10	-0.6175
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	16	73022897	80739646	7373	0.0108
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	16	80740904	80741499	2	1.5597
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	16	80742019	87165284	5828	0.0138
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	16	87165297	87173318	4	1.4951
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	16	87173634	88815036	663	0.0678
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	17	526	611794	337	0.051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	17	613993	614127	2	1.8703
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	17	625241	18299671	11106	0.0122
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	17	18299674	18405946	27	-1.1316
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	17	18409922	31459625	6921	0.0139
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	17	31460380	31501716	39	0.4414
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	17	31509204	41513306	5078	0.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	17	41513416	41719947	131	0.2682
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	17	41750187	42107462	47	-0.394
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	17	42107479	73781682	19277	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	17	73787468	73794563	5	0.9483
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	17	73798338	76243458	1372	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	17	76244388	76248774	2	1.7725
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	17	76248895	78643088	963	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	18	1543	1892886	1314	0.0204
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	18	1895358	1970787	95	-0.8593
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	18	1976214	36514478	21440	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	18	36514488	36519361	12	-0.6376
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	18	36519375	76116029	27963	0.009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	19	41910	1197658	270	0.0436
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	19	1198835	1222274	2	1.4328
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	19	1222529	8317656	2691	0.0114
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	19	8318172	8320301	2	-3.2052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	19	8327007	35976646	10713	0.0141
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	19	35979958	35980380	2	-1.7318
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	19	35982439	40541162	3148	-0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	19	40541333	40562276	28	0.3051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	19	40566223	41537715	438	-0.0102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	19	41537990	41539338	10	-1.1162
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	19	41539477	50440084	4668	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	19	50440194	50441095	2	-1.5496
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	19	50448216	58654809	4282	0.0193
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	19	58656216	58656231	2	-1.9845
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	19	58656344	60963955	1245	0.0153
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	19	60964869	60974879	7	0.81
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	19	60978105	63789666	1848	0.0273
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	20	9305	1530207	1242	0.0124
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	20	1538257	1546336	8	-1.0328
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	20	1547002	53061637	34654	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	20	53061781	53064870	2	1.7802
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	20	53064986	62426597	6600	0.0116
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	21	9758742	22573005	6466	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	21	22577771	22595754	12	-0.6507
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	21	22595775	46921385	17935	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	22	14432528	24066345	5518	0.0296
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	22	24066672	24066678	6	0.9831
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	22	24075901	41222540	11909	0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	22	41227226	41309995	37	0.3337
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	22	41311111	47654704	4859	0.0097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	22	47655927	47659295	3	-1.4635
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	22	47659730	49581321	1234	0.0351
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	X	108477	5164949	1903	-0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	X	5164977	5165468	2	-2.7459
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	X	5167679	17269277	8781	-0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	X	17281239	17282556	3	1.8374
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	X	17282717	62327266	23112	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	X	62350277	62387177	8	0.7006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	X	62387578	62394984	8	1.46
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	X	62397624	62422360	10	0.877
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	X	62422551	145986786	45624	0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	X	145987677	145991841	9	-2.4252
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	X	145991875	145992676	8	-0.8714
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	X	145992698	154433876	4990	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	X	154436207	154440761	5	-2.8016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	X	154442377	154835548	95	-0.0135
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	Y	2710438	22400392	7414	-0.9426
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	Y	22401564	22770660	74	-0.5193
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	Y	22771258	22934748	83	-0.1685
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	Y	22937444	23034142	41	-0.5647
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H02_896466	Y	23036466	57427647	977	-1.0026
