Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	1	3208470	31394014	14893	0.1596
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	1	31396254	31397933	2	-1.2738
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	1	31397976	148148638	52831	0.0683
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	1	148151551	188226803	24728	0.3655
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	1	188227308	245880329	36595	-0.0312
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	2	474222	44510128	26073	-0.0263
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	2	44513943	44514588	2	-1.4328
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	2	44516656	141747060	47418	-0.0236
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	2	141750053	142009833	199	-0.3047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	2	142009981	241660361	57277	-0.0158
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	2	241662729	241662834	2	-1.2066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	2	241665562	242124735	264	-0.0446
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	3	526235	27784793	14903	0.0213
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	3	27787379	27789515	7	-0.7815
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	3	27792023	199023074	91446	0.014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	4	1043934	92731644	50713	-0.0177
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	4	92732294	92734726	2	-1.5401
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	4	92738087	189836143	51989	-0.0113
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	5	967233	180293075	100478	0.0341
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	6	959281	81548019	44370	0.0979
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	6	81549502	170745844	52061	-0.2825
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	7	671810	22838670	11445	-0.0095
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	7	22838913	50766185	18023	-0.2904
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	7	50767145	158077879	51819	0.3811
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	8	607667	12641957	5098	-0.3061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	8	12644967	12646342	2	-1.8374
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	8	12646621	39243955	17360	-0.2951
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	8	39247688	145295179	59033	-0.0217
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	8	145297095	145304484	5	-0.3567
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	9	779932	780037	2	-0.7175
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	9	780234	72609380	25108	-0.0198
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	9	72609744	72610991	2	-1.503
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	9	72612944	140058573	42882	-0.0305
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	10	405240	55641572	31991	-0.0315
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	10	55642037	55642373	2	-1.3972
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	10	55643595	135075077	48854	-0.0306
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	11	446120	78183659	41215	-0.0343
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	11	78185209	78187366	4	-1.0258
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	11	78187581	132070092	35347	-0.0335
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	11	132071297	132071379	2	-1.3715
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	11	132073239	133647740	668	-0.0276
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	12	760163	131671419	73927	-0.0234
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	13	18348806	114005560	56627	-0.0212
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	14	19571208	105059083	49436	-0.0306
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	15	21238778	36369982	7061	0.186
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	15	36375304	51785260	8835	-0.2961
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	15	51789559	99701830	28618	0.3638
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	593460	19471014	8560	-0.0553
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	19473005	19835084	187	-0.3552
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	19836055	31757800	5137	-0.0484
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	45065166	45272828	55	0.544
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	45284756	48655782	1945	0.0418
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	48659269	49007288	189	-0.2959
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	49012441	53043591	2993	-0.035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	53043645	53109366	49	0.2459
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	53112290	69396838	9701	-0.0315
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	69403572	69757550	66	0.2657
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	69762695	71935575	1166	-0.0277
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	71936337	72870459	725	-0.3253
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	72870760	73563417	314	-0.0365
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	73564313	73593934	12	-0.4258
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	73596319	75032208	851	-0.0142
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	75033045	75066924	24	-0.3509
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	75067424	75217923	94	0.0389
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	75218355	76334254	907	-0.2874
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	76334560	76388882	51	-0.0486
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	76389377	76406748	23	-0.4309
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	76406923	78957754	2342	-0.0391
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	78960797	81370758	1823	-0.3102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	81371338	81887325	406	-0.0244
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	81887459	81944541	67	-0.2988
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	81945510	82000571	83	-0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	82002789	87907437	3079	-0.3222
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	17	933971	78510305	36977	-0.0479
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	18	319586	75210228	42647	-0.0267
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	19	235018	61394206	22749	-0.0598
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	19	61395648	62640958	769	-0.314
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	19	62641238	63570038	424	-0.0366
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	20	403764	16433885	10188	-0.0276
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	20	16434128	17414149	877	-0.2923
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	20	17414493	19886351	1963	-0.0343
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	20	19886973	29307634	3797	-0.3015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	20	29309942	61690281	20450	0.1673
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	21	14269492	46503202	20574	-0.0336
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	22	15803930	47717016	16918	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	X	3167107	37596695	15335	0.0151
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	X	37599801	37599995	3	-2.7262
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	X	37604384	69421394	11359	0.0089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	X	69421489	69421512	2	-2.2022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	X	69423244	71091988	644	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	X	71094391	71095572	2	-4.4909
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	X	71098900	105301384	13814	0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	X	105301785	105309255	3	-2.6124
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	X	105309666	154558783	22492	0.0101
