Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	1	3218610	31621427	14891	0.1596
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	1	31623667	31625346	2	-1.2738
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	1	31625389	149882014	52891	0.0685
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	1	149884927	189960180	24728	0.3654
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	1	189960685	247813706	36593	-0.0312
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	2	484222	44656624	26069	-0.0263
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	2	44660439	44661084	2	-1.4328
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	2	44663152	142030590	47411	-0.0236
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	2	142033583	142293363	199	-0.3047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	2	142293511	242011688	57280	-0.0158
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	2	242014056	242014161	2	-1.2066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	2	242016889	242476062	264	-0.0446
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	3	2212571	27809789	14902	0.0212
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	3	27812375	27814511	7	-0.7815
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	3	27817019	197538677	91441	0.014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	4	1053934	92512621	50711	-0.0177
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	4	92513271	92515703	2	-1.5401
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	4	92519064	188763651	51996	-0.0113
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	5	914233	180360469	100478	0.0341
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	6	1014281	81491300	44373	0.0979
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	6	81492783	170903919	52067	-0.2824
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	7	705284	22872145	11447	-0.0095
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	7	22872388	50798691	18021	-0.2904
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	7	50799651	158385118	51820	0.381
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	8	617667	12597586	5098	-0.306
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	8	12600596	12601971	2	-1.8374
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	8	12602250	39124798	17360	-0.2951
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	8	39128531	145223191	59040	-0.0217
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	8	145225107	145232496	5	-0.3567
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	9	789932	790037	2	-0.7175
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	9	790234	73419560	25114	-0.0197
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	9	73419924	73421171	2	-1.503
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	9	73423124	140938752	42888	-0.0305
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	10	415240	55971566	31991	-0.0315
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	10	55972031	55972367	2	-1.3972
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	10	55973589	135225087	48852	-0.0305
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	11	456120	78506011	41212	-0.0343
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	11	78507561	78509718	4	-1.0258
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	11	78509933	132564882	35340	-0.0335
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	11	132566087	132566169	2	-1.3715
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	11	132568029	134142530	668	-0.0276
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	12	889902	133161346	73922	-0.0234
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	13	19450806	114987458	56623	-0.0212
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	14	20501368	105988038	49434	-0.0306
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	15	23687685	38582690	7061	0.186
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	15	38588012	53997968	8836	-0.296
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	15	54002267	101884307	28615	0.3638
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	653459	19563513	8560	-0.0553
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	19565504	19927583	187	-0.3552
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	19928554	31850299	5137	-0.0484
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	46507665	46715327	55	0.544
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	46727255	50098281	1945	0.0418
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	50101768	50449787	189	-0.2959
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	50454940	54486090	2993	-0.035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	54486144	54551865	49	0.2459
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	54554789	73378074	10867	-0.0311
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	73378836	74312958	725	-0.3253
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	74313259	75005916	314	-0.0365
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	75006812	75036433	12	-0.4258
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	75038818	76474707	851	-0.0142
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	76475544	76509423	24	-0.3509
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	76509923	76660422	94	0.0389
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	76660854	77776753	907	-0.2874
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	77777059	77831381	51	-0.0486
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	77831876	77849247	23	-0.4309
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	77849422	80400253	2342	-0.0391
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	80403296	82813257	1823	-0.3102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	82813837	83329824	406	-0.0244
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	83329958	83387040	67	-0.2988
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	83388009	83443070	83	-0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	16	83445288	89379936	3079	-0.3222
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	17	987221	80917016	36977	-0.0479
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	18	329586	77109240	42644	-0.0267
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	19	284018	56702394	22749	-0.0598
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	19	56703836	57949146	769	-0.314
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	19	57949426	58878226	424	-0.0366
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	20	455764	16485885	10191	-0.0277
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	20	16486128	17466149	877	-0.2923
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	20	17466493	19938351	1963	-0.0343
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	20	19938973	29843973	3797	-0.3015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	20	29846281	62219837	20450	0.1673
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	21	15347621	47678774	20573	-0.0336
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	22	17423930	49331012	16917	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	X	3157107	37711751	15335	0.0152
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	X	37714857	37715051	3	-2.7262
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	X	37719440	69504669	11367	0.0089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	X	69504764	69504787	2	-2.2022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	X	69506519	71175263	646	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	X	71177666	71178847	2	-4.4909
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	X	71182175	105414728	13819	0.0069
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	X	105415129	105422599	3	-2.6124
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H06_896448	X	105423010	154905589	22494	0.0101
