Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	1	61735	16869363	8731	-0.0136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	1	16871278	16970178	38	-0.4114
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	1	16970311	17017078	25	0.2693
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	1	17017530	17094066	28	-0.2776
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	1	17100230	17114712	9	-0.9587
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	1	17177045	17217907	15	-0.0186
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	1	17224970	17298496	62	0.3037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	1	17299727	72768498	34149	-0.0141
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	1	72768916	72811148	46	-1.1407
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	1	72811904	104225568	20106	-0.0097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	1	104239689	104261206	12	0.6028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	1	104268222	106019205	921	-0.0175
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	1	106019236	106022375	16	-2.0534
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	1	106024055	149036524	11052	-0.0097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	1	149040066	149290775	137	-0.7057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	1	149291599	152551261	1510	-0.0133
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	1	152551325	152586576	44	-0.421
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	1	152586594	174796405	15084	0.0317
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	1	174796556	174801840	16	-0.6604
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	1	174801854	194448234	13206	0.2493
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	1	194451411	194455018	2	-1.7954
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	1	194457016	196714873	1454	0.2547
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	1	196727850	196885685	152	-0.6792
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	1	196886709	199107702	1323	0.2436
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	1	199111363	199113011	8	-0.8899
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	1	199113840	213004455	9390	0.2377
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	1	213005012	213010436	7	-0.9751
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	1	213014453	249224388	25180	0.2448
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	2	12784	34467939	23969	-0.1072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	2	34467962	34469289	2	-2.152
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	2	34470589	34691069	142	-0.1203
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	2	34699315	34726680	38	0.3773
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	2	34726696	52754468	13054	-0.1102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	2	52754480	52790493	42	-0.6996
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	2	52792124	106880095	29673	-0.1121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	2	106880713	106881633	3	-1.0488
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	2	106883229	106885357	8	-2.4801
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	2	106887255	146862085	23948	-0.1066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	2	146864404	146866934	24	0.4749
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	2	146877806	186818743	24497	-0.1035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	2	186821042	186828833	6	-1.1614
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	2	186829446	243089456	34652	-0.1031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	60345	224602	156	-0.0783
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	230022	232639	3	-3.0548
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	232800	1781803	1394	-0.0554
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	1782524	1787581	6	-1.4229
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	1789158	65188453	43838	-0.0161
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	65189235	65199702	31	-0.7848
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	65199867	65206944	13	-0.0246
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	65207331	65209977	5	-0.9598
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	65210154	68746164	2428	-0.0236
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	68746259	68747413	14	-1.0493
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	68748758	75364430	4844	-0.0179
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	75364480	75367093	3	-1.2289
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	75369704	75421170	29	0.0932
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	75427107	75639507	74	-2.4012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	75645384	98937784	11001	-0.0219
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	98944458	98953761	44	0.4462
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	98964877	129791169	18768	-0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	129791209	129806236	33	-0.537
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	129806924	151509338	13596	-0.0136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	151510042	151545879	31	-1.0703
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	151548491	162532950	6679	-0.011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	162534730	162540490	6	1.8692
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	162545716	162626572	49	0.3009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	162626603	192878045	19200	-0.0155
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	192878195	192882903	17	-1.1585
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	192886435	195399075	1490	-0.0117
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	195400799	195446597	22	0.646
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	195446742	197834148	1159	-0.021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	197834346	197835005	8	0.7438
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	197835438	197838578	8	-0.0984
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	197845216	197849705	11	-1.6408
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	3	197851225	197896118	9	-0.014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	4	12281	10210294	5803	-0.0286
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	4	10210390	10234266	32	0.3882
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	4	10234608	34778962	16995	-0.0153
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	4	34778975	34829913	45	0.5732
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	4	34829928	49154769	8974	-0.0184
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	4	49161758	49658612	33	0.4156
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	4	52685699	69420023	10510	-0.0124
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	4	69420039	69484049	40	-0.4553
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	4	69484087	115173700	27749	-0.012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	4	115175323	115182175	23	-1.0325
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	4	115184229	130062751	8737	-0.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	4	130067546	130068160	2	-3.0412
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	4	130072563	138092239	4521	-0.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	4	138092420	138092805	8	-3.3126
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	4	138092907	138093414	6	-1.3877
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	4	138094958	172368442	21471	-0.015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	4	172368531	172377710	12	-1.0275
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	4	172377724	191027923	12538	-0.0235
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	5	15532	667509	300	0.0672
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	5	670745	817850	51	0.4526
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	5	817992	12819313	9878	0.107
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	5	12819375	12838533	11	-1.369
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	5	12849201	15719222	1978	0.1416
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	5	15719350	15720451	8	-0.7187
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	5	15720478	17828138	1356	0.1217
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	5	17828853	17828869	2	-1.8089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	5	17829787	180378710	99386	0.1138
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	5	180378888	180433264	20	0.6351
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	5	180442400	180790320	169	0.0584
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	6	149661	294443	121	0.158
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	6	294474	382559	82	-0.1365
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	6	382897	29837188	21546	0.1663
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	6	29837314	29849267	14	-0.833
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	6	29850196	32430729	1182	0.1592
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	6	32430975	32540477	37	-0.374
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	6	32540611	32624304	35	0.2843
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	6	32624591	32626618	5	-1.1856
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	6	32650612	53931151	13749	0.1625
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	6	53931230	53931855	6	1.8846
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	6	53935348	65336942	4357	0.1695
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	6	65347544	65348992	2	-1.7573
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	6	65350776	66394090	699	0.1672
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	6	66399482	66407127	25	-0.557
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	6	66407210	69077987	1914	0.1829
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	6	69080431	77014948	5008	-0.1087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	6	77016900	77016926	3	1.3679
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	6	77016993	77440048	298	-0.1042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	6	77440094	77452689	18	0.3342
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	6	77452757	78962889	980	-0.1201
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	6	78969065	79041633	114	-0.8511
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	6	79041719	171051005	59787	-0.1158
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	7	43355	61850293	40713	0.076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	7	61850588	62123585	57	0.5022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	7	62123747	70419818	4109	0.0574
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	7	70420438	70426141	3	-1.6163
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	7	70428243	100325189	17165	0.071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	7	100329244	100329265	2	-2.2816
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	7	100332842	101052486	265	0.0801
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	7	101059732	101059949	2	-2.0989
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	7	101062911	105158056	2256	0.0819
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	7	105160424	105166520	3	-1.7324
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	7	105166776	133778468	17610	0.076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	7	133778637	133798109	35	0.5787
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	7	133798543	159127004	16304	0.0762
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	8	31254	593041	326	-0.2424
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	8	594944	595875	8	0.7026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	8	595892	595908	2	3.7216
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	8	601043	7255110	7525	-0.2464
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	8	7267365	7832054	149	-0.6184
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	8	7838543	51030772	27551	-0.215
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	8	51032011	51032387	8	-1.6804
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	8	51033423	58372366	4797	-0.0187
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	8	58372508	58378246	12	-0.5795
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	8	58381007	112294466	32656	-0.0155
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	8	112294646	112295260	7	-1.2054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	8	112300281	137677896	17758	-0.0142
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	8	137681619	137862416	174	-0.8834
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	8	137862435	146298155	5004	-0.0177
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	9	46587	44629223	31477	-0.1131
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	9	44727859	44855737	36	0.5926
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	9	44866028	141091394	48431	-0.1116
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	10	72759	24377675	19251	-0.1141
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	10	24377676	24378054	9	-1.83
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	10	24378908	42750872	9973	-0.1122
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	10	42760053	42767643	3	-1.398
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	10	42782884	46674180	2353	-0.1014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	10	46691159	46946708	8	-1.3361
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	10	46946732	47055711	73	-0.3331
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	10	47058792	47059821	22	0.3412
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	10	47062311	47067481	6	-0.1257
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	10	47068227	47142307	53	-0.7377
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	10	47142322	90938673	28901	-0.1163
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	10	90942967	90943659	6	-1.8055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	10	90943736	135506704	30445	-0.1145
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	11	198510	4970243	2480	-0.0124
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	11	4970277	4976272	28	-1.7167
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	11	4976334	5778523	788	-0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	11	5782925	5809338	42	0.3904
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	11	5809461	6116105	243	-0.0131
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	11	6116843	6122503	6	-1.4174
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	11	6123888	18951693	9193	-0.0157
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	11	18951931	18962363	44	0.4215
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	11	18970705	51096372	21455	-0.0127
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	11	51126742	51183575	7	-1.1662
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	11	51183694	55361431	378	0.0293
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	11	55363340	55453009	60	0.439
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	11	55453576	62512750	4191	-0.0131
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	11	62514299	62514881	4	1.0355
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	11	62515106	67515854	2056	-0.0098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	11	67516837	67531098	6	-1.0167
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	11	67533785	97472630	19165	-0.018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	11	97472731	97473215	3	-1.5757
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	11	97474934	101594384	3228	-0.0147
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	11	101597860	101597964	4	1.4245
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	11	101598212	134944770	23783	-0.0094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	12	150442	11220724	7275	0.0854
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	12	11220827	11241532	11	-1.0451
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	12	11251874	33294660	15592	0.084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	12	33301406	33302201	9	-2.1969
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	12	33302438	33303293	3	-6.835
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	12	33303378	33307374	15	-2.0166
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	12	33308360	115087271	49390	-0.0102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	12	115088212	115090409	2	-2.1816
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	12	115090533	133778189	12798	-0.0135
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	13	19026949	53094799	23498	0.0853
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	13	53097984	53105785	3	-1.5513
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	13	53117879	72476988	11661	0.078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	13	72477555	72480556	4	-2.8922
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	13	72480605	115108397	29155	0.0805
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	14	19002124	19191718	19	-0.31
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	14	19273625	19557041	21	0.6945
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	14	19562139	22325140	1414	-0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	14	22325471	23006227	643	-0.3387
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	14	23010444	73995774	32242	0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	14	74001123	74029900	10	1.7316
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	14	74029915	88403376	9528	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	14	88403394	88422569	23	0.4059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	14	88426637	106777343	11386	0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	14	106783044	106821736	12	-1.0348
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	14	106825916	106868286	26	0.1439
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	14	106868554	107153042	185	-0.2098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	14	107153067	107184184	25	0.3865
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	14	107184376	107285437	68	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	15	20016328	20262236	53	0.057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	15	20264286	22751094	372	0.4847
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	15	22751245	24054787	612	0.0806
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	15	24055437	24059093	19	-1.0204
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	15	24059307	24397562	249	0.1054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	15	24397619	24448753	26	-0.321
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	15	24454386	102469040	50743	0.119
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	16	60777	34471298	20555	0.0835
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	16	34471464	34755566	165	0.5155
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	16	34757071	55227614	6089	0.0773
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	16	55228864	55231336	5	-1.1701
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	16	55231740	78372846	14970	0.078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	16	78373337	78383140	11	0.995
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	16	78384738	90287535	10650	0.0801
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	17	526	32272785	16831	-0.0158
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	17	32273581	32275062	2	-2.442
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	17	32275064	34425363	1552	-0.018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	17	34425574	34535651	49	0.3139
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	17	34543343	39414647	2537	-0.0204
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	17	39418372	39430450	26	1.1386
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	17	39430531	39515557	78	0.0102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	17	39517028	39517945	8	0.6505
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	17	39517976	44208333	2460	-0.0131
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	17	44208674	44364170	92	0.3991
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	17	44394412	77242761	19910	-0.0159
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	17	77243050	77246390	5	-1.1306
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	17	77247044	79113441	1020	-0.0076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	17	79128766	79131913	6	-1.0805
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	17	79135157	81049726	726	-0.0176
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	18	11543	220071	59	-0.1768
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	18	220341	220599	2	-1.8579
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	18	225051	6574570	4617	-0.1121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	18	6579216	6580728	2	-1.7349
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	18	6580778	11625900	3862	-0.1099
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	18	11637252	11643637	2	-2.177
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	18	11648759	24365863	5372	-0.0459
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	18	24365915	24366379	4	-1.1372
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	18	24366562	53302340	19095	-0.0128
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	18	53303142	53318588	10	-0.9569
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	18	53323391	78015057	17800	-0.013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	19	90910	9273800	3413	0.07
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	19	9274672	9278121	5	-1.9523
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	19	9284760	55339733	23634	0.0127
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	19	55347130	55360538	7	-0.9337
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	19	55363524	56282070	446	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	19	56282369	56283067	4	-2.1546
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	19	56286293	56503360	219	-0.0561
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	19	56503690	56506176	2	-1.6724
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	19	56508027	59097854	1626	-0.0178
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	20	61305	8269201	6237	0.0827
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	20	8269273	8269704	2	-2.4201
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	20	8273096	62956153	36272	0.0749
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	21	10736871	48096957	24411	0.0707
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	22	16052528	24330218	4617	-0.1137
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	22	24330269	24331967	2	-2.8954
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	22	24332625	24337949	4	-0.3605
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	22	24344422	24396814	20	0.3725
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	22	24401529	39374715	10889	-0.1201
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	22	39375307	39399312	14	0.4979
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	22	39403794	50967032	7864	-0.1195
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	22	50973108	50973116	5	-1.488
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	22	50973754	51234455	147	-0.0672
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	X	168477	115930727	61328	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	X	115930813	116047963	71	0.5361
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	X	116049629	155182354	23220	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	Y	2650438	6035471	837	-2.3453
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	Y	6039351	6039663	2	-7.6439
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	Y	6048274	6110498	35	-2.3534
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	Y	6112554	6424299	126	-3.5453
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	Y	6426233	19478007	4623	-2.845
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	Y	19478574	21088297	745	-3.3951
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	Y	21088485	23653771	978	-2.884
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	Y	23683731	23690350	2	-8.0883
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	Y	23715701	24514859	264	-2.9477
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	Y	24515802	26190025	315	-3.5207
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	Y	26193050	26513715	89	-2.7549
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	Y	26517533	27315972	92	-3.791
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	Y	27367487	27720551	93	-2.5355
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	Y	27721084	28277692	195	-3.3962
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	Y	28289727	28322019	13	-4.9766
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	Y	28322083	28452016	50	-3.2507
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H09_896630	Y	28457337	59018259	176	-2.5332
