Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	1	3208470	101324101	56712	0.0208
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	1	101326055	101416798	71	0.2849
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	1	101420916	101427880	2	-0.76
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	1	101428258	102836762	858	0.3188
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	1	102836941	120328884	10085	0.0241
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	1	142745296	190682823	26084	0.5176
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	1	190685431	190687251	5	1.3897
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	1	190687520	245880329	35251	0.5284
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	2	474222	240224882	130198	0.0116
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	2	240226250	240229610	6	-0.8042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	2	240236764	241891857	932	0.0122
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	2	241895288	241896667	2	-0.8131
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	2	241896706	242124735	127	-0.0143
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	3	526235	30166127	16534	0.0173
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	3	30167548	30167569	2	-1.1079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	3	30167781	44876446	8734	0.0202
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	3	44876766	44885697	3	-0.8972
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	3	44888143	67978791	13207	0.0179
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	3	67987822	70107050	1583	0.3305
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	3	70163580	118660599	24009	0.0159
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	3	118661306	118661434	2	-1.2164
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	3	118664894	189413207	37512	0.0139
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	3	189414346	189416055	2	-1.0657
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	3	189417543	199023074	4780	0.0251
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	4	1043934	7360214	3423	0.0234
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	4	7362300	7364122	2	-1.0006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	4	7364944	13610619	4111	0.0349
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	4	13611688	13611753	2	-1.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	4	13617304	61032241	26009	0.0234
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	4	61033738	61034777	2	-1.1044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	4	61035124	106750252	24783	0.0191
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	4	106751193	106751207	2	-1.2157
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	4	106751387	189836143	44379	0.0185
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	5	967233	114784354	61041	0.0191
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	5	114784536	114784761	5	-1.0212
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	5	114786977	180293075	39440	0.026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	6	959281	47026946	27637	0.3165
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	6	47027065	47028949	4	1.0179
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	6	47032426	56231928	5690	0.3184
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	6	56232968	56316413	72	0.5975
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	6	56320537	57314444	481	0.3316
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	6	62292492	62639716	109	-0.3863
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	6	62640811	63169108	237	0.3216
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	6	63169757	63458512	132	-0.3807
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	6	63468516	63589824	62	0.3332
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	6	63591707	63741563	66	-0.3481
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	6	63745409	63759025	9	0.3187
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	6	63762862	78077555	8084	-0.3732
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	6	78077981	78081004	2	-1.8905
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	6	78081349	169381826	53252	-0.3834
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	6	169381924	170521310	455	-0.9355
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	6	170521603	170745844	145	-0.3713
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	7	671810	20068746	9395	0.3194
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	7	20069981	21520852	1058	0.5629
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	7	21524379	34790907	8824	0.3166
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	7	34791961	34813721	8	-0.2547
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	7	34815029	77565206	19688	0.315
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	7	77567356	77569156	3	-0.7457
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	7	77572905	158077879	42324	0.313
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	8	607667	145304484	81520	0.3149
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	9	779932	2471455	1070	-0.3841
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	9	2471651	2471683	2	0.7841
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	9	2473527	9178533	4105	-0.3656
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	9	9178615	9178865	3	-1.301
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	9	9178957	14553604	2570	-0.3634
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	9	14554090	14554101	2	-1.7304
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	9	14555982	16318688	1390	-0.3632
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	9	16323416	16740563	362	-0.9473
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	9	16740627	31011638	9020	-0.3638
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	9	31013908	31029375	18	0.1225
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	9	31034850	140058573	49452	-0.3706
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	10	405240	74148127	42850	-0.3732
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	10	74149053	74152211	4	-2.0428
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	10	74160029	135075077	37985	-0.372
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	11	446120	108251698	59756	0.0144
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	11	108254505	108254518	2	-1.0279
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	11	108257290	133647740	17496	0.0252
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	12	760163	131671419	73937	0.0188
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	13	18348806	54955504	21791	-0.3804
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	13	54960164	55092179	72	-0.7936
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	13	55095843	103347771	28365	-0.3746
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	13	103366378	104141318	597	-0.9509
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	13	104143252	114005560	5802	-0.3866
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	14	19571208	105059083	49441	0.018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	15	21238778	21792017	407	0.0242
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	15	21792435	21836058	27	-0.9307
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	15	21839185	30724755	2811	0.0292
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	15	30732162	30885348	134	0.366
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	15	30885852	99701830	41141	0.0211
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	16	593460	595263	6	-0.2224
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	16	608968	4817959	1487	-0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	16	4818403	4818890	3	-0.8156
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	16	4823598	31757800	12388	0.025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	16	45065166	69396838	14932	-0.3448
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	16	69403572	69757550	66	0.2934
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	16	69762695	87907437	11973	-0.3527
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	17	933971	1451914	151	0.0151
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	17	1454041	1456656	2	-1.1753
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	17	1457687	78510305	36830	0.0134
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	18	319586	8600640	4515	0.0387
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	18	8603487	9333487	503	-0.3914
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	18	9340744	75210228	37632	0.0248
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	19	235018	7351633	2052	-0.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	19	7357300	7360022	3	-1.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	19	7366859	63570038	21891	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	20	403764	61690281	37277	0.0233
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	21	14269492	46503202	20582	0.0184
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	22	15803930	47717016	16923	0.0255
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	X	3167107	12341497	3134	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	X	12342668	12344677	4	-1.7127
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	X	12344690	115798725	42905	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	X	115800470	115813934	4	-2.4106
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	X	115814141	129376110	6683	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	X	129379652	129379685	2	-2.8757
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	X	129380590	152469185	10650	0.0108
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	X	152476524	152521612	23	-1.1664
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_H11_896572	X	152522030	154558783	319	0.0192
