Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	1	61735	12841928	6530	0.0098
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	1	12845863	13185738	45	0.3227
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	1	13187370	72750353	36464	0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	1	72756113	72762676	8	-0.8753
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	1	72763370	91594813	12354	0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	1	91595368	91595792	2	-1.8206
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	1	91596338	104159384	7778	0.0031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	1	104163499	104260239	25	0.5566
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	1	104261206	106012754	920	0.011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	1	106013376	106022360	17	0.7016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	1	106022375	110232974	2672	-4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	1	110233037	110240178	16	-1.1814
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	1	110242953	145151134	7375	0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	1	145151728	145152757	6	1.1116
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	1	145156301	152555527	2641	0.0248
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	1	152555706	152586238	31	1.138
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	1	152586278	152759678	175	0.014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	1	152761923	152776755	39	0.7193
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	1	152778443	161508875	5278	0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	1	161517939	161636985	41	0.4122
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	1	161637159	248737447	60103	0.0056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	1	248749194	248797213	33	-0.8259
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	1	248805339	249224388	145	0.0608
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	2	12784	33762963	23380	0.0075
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	2	33765768	33768112	2	-1.6967
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	2	33770267	34691069	734	-0.0112
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	2	34699315	34737057	46	0.5893
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	2	34737163	35968036	877	0.0231
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	2	35975973	35987916	7	0.8067
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	2	35987947	52754468	12163	0.0092
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	2	52754480	52754881	6	-1.5543
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	2	52758753	52781522	32	-0.4385
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	2	52781542	98025647	24073	0.0088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	2	98063372	98162189	12	0.929
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	2	98166878	129638078	19048	0.0071
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	2	129638478	129640315	15	-0.6281
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	2	129640329	146862085	10478	0.0111
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	2	146864404	146866934	24	-1.8306
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	2	146877806	243089456	59129	0.0015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	3	60345	68746164	47867	0.008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	3	68746259	68748758	15	-1.3507
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	3	68748786	98945299	15964	0.0031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	3	98945395	98949056	13	-0.7097
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	3	98949069	108695063	5905	0.0047
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	3	108695079	108695477	2	-1.7482
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	3	108697117	129762859	12851	0.0069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	3	129763698	129806236	52	0.5994
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	3	129806924	162530870	20293	0.0068
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	3	162532950	162540490	7	-1.4481
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	3	162545716	162623897	46	0.3062
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	3	162625980	162626603	4	-1.3065
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	3	162628614	162714517	70	0.0115
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	3	162717727	162719562	2	-2.3572
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	3	162726159	168730180	3371	0.0081
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	3	168733402	168738628	2	-2.2312
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	3	168739827	184457639	9712	0.0128
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	3	184459876	184459941	2	-2.1473
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	3	184464520	192383632	5686	0.0101
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	3	192388234	192390777	4	-0.9585
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	3	192392367	192877902	342	0.0486
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	3	192877962	192886435	20	1.0919
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	3	192886458	197896118	2706	0.0126
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	4	12281	9456977	5248	0.0141
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	4	9461230	9479345	9	1.8029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	4	9486087	10223416	547	-1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	4	10223628	10230812	22	-0.9033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	4	10230903	34786500	17005	0.0044
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	4	34786955	34824725	37	0.6839
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	4	34829872	64693940	16588	0.0067
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	4	64697469	64716431	30	0.4645
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	4	64717026	66567056	1183	-0.0036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	4	66567179	66567198	2	-1.3643
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	4	66568768	69226848	1666	0.0095
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	4	69226848	69485979	94	0.4761
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	4	69489335	122281973	32112	0.0036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	4	122282468	122283948	22	-0.6463
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	4	122284151	138179445	8989	0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	4	138182433	138190884	50	-0.7456
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	4	138191970	152789393	8747	-9e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	4	152789786	152792567	13	-1.0181
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	4	152792891	155802548	1952	0.0016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	4	155803005	155803078	3	1.1806
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	4	155803199	161041304	3282	0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	4	161052774	161083870	41	-0.7678
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	4	161084069	161880124	593	0.0167
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	4	161880141	161884908	19	-0.7129
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	4	161884919	172369346	6675	0.0075
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	4	172374884	172377444	8	1.2496
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	4	172377458	191027923	12538	0.0135
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	5	15532	670745	301	0.0759
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	5	676449	779881	37	0.4126
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	5	781547	7169476	5410	0.0131
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	5	7177338	7189925	26	-0.9346
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	5	7202635	12833857	4461	0.0081
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	5	12837978	12838533	2	1.6725
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	5	12849201	15719222	1977	0.0016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	5	15719350	15720597	10	-5.231
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	5	15723346	57321646	23670	0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	5	57326027	57333533	32	1.621
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	5	57338357	68846303	7305	0.0064
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	5	68867294	69118135	5	-1.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	5	69233427	70254906	13	-0.0129
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	5	70306659	70391253	8	-0.6884
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	5	70654072	103860373	19534	0.0064
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	5	103860481	103860604	3	-1.2817
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	5	103861049	112260403	5605	0.0015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	5	112264539	112276647	9	-0.8194
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	5	112284223	117386617	3790	0.0068
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	5	117388422	117389085	11	-0.7183
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	5	117404340	155476920	24055	0.0011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	5	155476998	155482729	12	-0.5893
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	5	155495250	180790320	16835	0.0067
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	6	149661	31280823	22438	0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	6	31286276	31295406	7	-1.509
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	6	31295953	32449523	511	0.0398
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	6	32452801	32626618	69	-0.5348
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	6	32650612	33937999	809	-0.0125
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	6	33938743	33942375	3	-1.1033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	6	33942483	53931084	12936	0.0062
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	6	53931151	53931855	7	-1.3498
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	6	53935348	65336942	4355	0.0129
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	6	65347544	65348992	2	-2.462
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	6	65350776	74590498	6161	0.0035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	6	74590622	74601410	13	0.6287
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	6	74603555	77436532	1767	0.0085
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	6	77439868	77452392	16	-2.5488
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	6	77452446	77467931	7	-0.8579
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	6	77468466	103734829	16572	0.0081
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	6	103737976	103762061	46	0.7776
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	6	103765470	168332501	42373	0.0049
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	6	168335278	168605124	186	0.6552
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	6	168607208	171051005	1684	0.0249
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	7	43355	54380373	38575	0.01
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	7	54386505	54386517	6	-2.0091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	7	54393488	109440923	28832	0.0104
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	7	109441212	109453858	11	1.1551
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	7	109453910	121733384	7410	0.0084
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	7	121734934	121800392	32	-1.07
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	7	121803697	126260750	2749	0.0094
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	7	126261849	126262856	2	-2.2094
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	7	126262995	133785340	4567	0.0093
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	7	133785377	133799197	33	0.3927
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	7	133806244	141763124	5199	0.0108
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	7	141769643	141799117	46	0.3611
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	7	141799160	142474939	446	0.0206
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	7	142476719	142486345	29	0.8007
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	7	142486495	150285104	4734	0.0078
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	7	150285801	150312161	11	-0.7922
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	7	150312649	153147638	1716	-0.0016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	7	153147645	153147712	2	-1.9955
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	7	153147715	154389895	866	0.0259
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	7	154393171	154399613	4	-1.9771
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	7	154400830	159127004	3245	0.0142
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	8	31254	595220	329	0.0472
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	8	595443	595908	7	1.5218
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	8	601043	2081799	1157	0.0229
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	8	2081951	2081992	2	-1.6708
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	8	2082033	2701640	622	0.0359
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	8	2701773	2703899	10	0.6639
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	8	2707171	6826762	5599	0.0128
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	8	6827001	6837933	8	-1.2889
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	8	6839705	7214668	101	0.0557
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	8	7214810	7238019	22	-0.4428
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	8	7250380	7744064	112	0.424
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	8	7745979	7747699	4	-1.0721
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	8	7752048	12034307	3334	0.023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	8	12034997	12419427	100	0.5529
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	8	12419667	24974443	10437	0.0049
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	8	24974476	24991104	27	0.5554
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	8	24991127	64848636	22757	0.0066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	8	64848897	64849510	7	0.9945
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	8	64849723	112291494	28382	0.0063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	8	112294279	112295260	9	1.3902
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	8	112300281	146298155	22934	0.0074
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	9	46587	45723034	31557	0.0142
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	9	45749018	45915244	3	1.4801
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	9	46038854	75512050	3732	0.0123
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	9	75512127	75513572	4	-1.4026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	9	75514436	90522594	10838	0.0054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	9	90554151	90554219	2	-1.7535
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	9	90557957	141091394	33790	0.0044
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	10	72759	2072415	1477	0.0161
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	10	2072581	2072753	3	-1.2303
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	10	2073407	6411215	3944	0.0139
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	10	6411357	6411481	5	1.0487
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	10	6418754	31246510	18867	0.0031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	10	31251334	31251738	10	0.6769
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	10	31251779	51231576	9307	0.0153
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	10	51335029	51397071	2	1.5017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	10	51449369	67306276	11123	0.0084
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	10	67307923	67314430	27	-1.9514
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	10	67314446	135506704	46324	0.0065
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	11	198510	5788092	3305	0.013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	11	5789601	5809139	30	-0.6526
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	11	5809338	6107790	240	0.039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	11	6108269	6116843	4	-1.4534
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	11	6117014	18940322	9175	0.0044
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	11	18940856	18961178	42	0.3917
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	11	18961281	50769317	21474	0.0087
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	11	51096372	51183906	10	-1.0105
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	11	51192870	54720024	138	0.0788
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	11	54720823	54758291	2	2.0076
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	11	54773893	55376654	248	0.0866
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	11	55376662	55442318	36	0.629
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	11	55444211	101594384	28654	0.0084
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	11	101597860	101597964	4	2.067
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	11	101598212	134944770	23772	0.008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	12	150442	869278	422	0.0574
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	12	869316	874029	14	-0.8378
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	12	875354	2235889	830	0.026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	12	2245862	2258023	42	-0.7411
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	12	2258104	8357507	4244	0.0096
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	12	8362050	8378251	11	0.7972
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	12	8393828	11503942	1850	0.0121
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	12	11503975	11564128	45	0.4017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	12	11564511	18737882	4952	0.0047
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	12	18741306	18741730	2	-1.491
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	12	18742410	30240171	8176	0.0076
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	12	30240296	30243575	9	-0.7383
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	12	30243590	33294660	2276	0.0032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	12	33301406	33307374	27	0.4639
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	12	33308360	33386757	46	0.0135
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	12	33388829	33395142	4	-0.8613
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	12	33395418	45899825	5573	0.016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	12	45904438	45909537	4	1.7432
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	12	45913292	60169899	8284	0.006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	12	60173023	60173356	2	1.8649
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	12	60173828	129228886	45156	0.0043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	12	129230513	129232297	6	-1.3122
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	12	129232545	133778189	3085	0.0383
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	13	19026949	23629187	2892	0.015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	13	23629210	23639880	19	-0.4934
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	13	23639900	38071135	10645	0.0112
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	13	38072036	38084757	16	-1.8917
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	13	38088330	101884524	40842	0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	13	101884564	101887869	2	-1.5748
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	13	101887882	114827890	9748	0.0088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	13	114837450	114837707	4	1.0057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	13	114837726	115108397	126	0.0301
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	14	19002124	74001123	34340	0.0068
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	14	74006707	74029900	9	1.6909
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	14	74029915	106538062	20825	7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	14	106541753	106751284	97	0.7786
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	14	106753859	106872062	57	0.0345
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	14	106874361	106918094	51	-0.7603
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	14	106918108	107285437	224	0.0747
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	15	20016328	20264286	54	0.0977
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	15	20265978	20440538	14	-0.4715
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	15	20446138	20581564	37	-0.0706
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	15	20585988	20590042	14	-1.3748
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	15	20590160	22280477	189	-0.189
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	15	22284954	22291024	4	0.968
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	15	22293227	30386411	4791	0.0253
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	15	30398229	30900878	110	-0.2971
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	15	30913587	33669321	1758	0.0172
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	15	33675565	33675580	2	-2.8732
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	15	33676574	34727189	855	0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	15	34727622	34814542	59	-0.7035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	15	34818317	35945028	730	0.0087
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	15	35945850	35950160	4	-1.0731
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	15	35950167	63922752	18296	0.0066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	15	63925068	63931614	4	-1.3548
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	15	63934856	76878362	7431	-0.0032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	15	76891241	76895775	22	1.0516
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	15	76902179	102469040	17680	0.0073
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	16	60777	19944363	13524	0.0193
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	16	19945650	19967362	29	-0.6147
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	16	19970254	29345440	5620	0.0169
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	16	29347129	29351778	2	-1.734
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	16	29351839	48503594	2579	0.0239
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	16	48506061	48510610	2	1.4119
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	16	48512109	55795214	5561	0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	16	55796389	55822444	22	-0.5485
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	16	55829557	78923825	15162	0.0066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	16	78924958	78925805	2	-1.865
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	16	78925995	90287535	9924	0.0115
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	17	526	6100784	3375	0.028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	17	6100796	6100811	2	-2.2498
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	17	6101043	19497890	8472	0.0085
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	17	19499736	19538447	30	-0.7631
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	17	19538758	34436708	6512	0.0199
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	17	34437128	34485091	37	0.9552
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	17	34528125	44163098	5076	0.0035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	17	44165803	44394420	127	0.2842
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	17	44401067	44764994	46	-0.3959
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	17	44784652	81049726	21614	0.0083
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	18	11543	78015057	50808	0.007
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	19	90910	24374211	11207	0.0138
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	19	24374419	24464957	37	-0.5571
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	19	24487682	35849322	5576	0.0062
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	19	35849493	35861848	22	-0.4473
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	19	35866744	43549014	3853	0.0188
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	19	43556843	43603371	18	-0.8771
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	19	43607205	43654243	30	0.0462
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	19	43658826	43846394	87	-0.8161
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	19	43852601	56278050	6663	0.0218
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	19	56282070	56286293	6	1.4452
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	19	56288941	59097854	1848	0.0139
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	20	61305	1557190	1186	0.0142
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	20	1557219	1590257	57	0.4078
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	20	1590455	15144268	10287	0.0079
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	20	15144676	15144763	2	-1.5863
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	20	15150730	62956153	30963	0.0048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	21	10736871	48096957	24407	0.0055
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	22	16052528	20470610	2149	0.027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	22	20473346	20662706	4	-0.9782
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	22	20705775	20950564	154	0.0569
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	22	20952909	20956163	3	-1.55
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	22	20958301	21114396	139	0.0988
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	22	21114601	21115833	5	-0.8729
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	22	21115858	51234455	21108	0.0178
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	X	168477	36159509	22609	0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	X	36159691	36170107	4	-2.8029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	X	36171119	62450445	11157	0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	X	62457637	62505868	22	1.1476
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	X	62517002	76353650	6297	0.0145
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	X	76362292	76523952	17	1.0237
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	X	76545159	88159139	6443	-0.0031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	X	88164233	88166765	6	-2.4521
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	X	88167034	155182354	37913	0.0067
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	Y	2650438	9436620	2496	-0.9643
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	Y	9441523	9441534	5	-2.0598
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A07_895736	Y	9441871	59018259	6133	-0.9712
