Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	1	3208470	217466417	111120	0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	1	217469050	217469388	3	-1.4645
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	1	217471689	218828230	941	-0.0163
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	1	218829147	218829533	2	-1.393
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	1	218832502	245880329	16966	0.0017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	2	474222	77070078	44792	0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	2	77079784	77089031	11	-1.2984
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	2	77094321	242124735	86429	0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	3	526235	10293113	4554	-0.0016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	3	10294540	10300367	3	-1.3037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	3	10300750	199023074	101774	4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	4	1043934	44886613	26688	5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	4	44887324	44887622	2	-2.0176
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	4	44889833	189836143	75992	0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	5	967233	150916920	82319	0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	5	150918700	151007156	76	0.5697
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	5	151007371	180293075	18053	-0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	6	959281	10214453	6578	-0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	6	10214605	10236076	11	-0.4832
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	6	10236257	21916459	7959	-0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	6	21920221	21922731	3	-1.2818
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	6	21922770	72500090	24782	0.0035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	6	72500582	72500596	2	-1.376
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	6	72501745	135377122	35986	-1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	6	135383947	135384931	2	-1.3744
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	6	135391263	143841239	4878	0.0018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	6	143842979	143843367	2	-1.3076
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	6	143843526	170745844	16230	0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	7	671810	158077879	81293	0.0036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	8	607667	145304484	81487	0
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	9	779932	140058573	67986	0.002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	10	405240	135075077	80842	4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	11	446120	69296764	36518	0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	11	69301995	69302357	2	-1.491
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	11	69303186	124697053	34655	0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	11	124697491	124697581	3	-1.3082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	11	124698166	133647740	6053	-0.0066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	12	760163	131671419	73893	7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	13	18348806	47904387	18774	0
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	13	47904618	47904706	2	1.483
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	13	47904755	114005560	37829	-6e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	14	19571208	45660660	13200	0.0045
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	14	45661808	45661927	2	-1.8895
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	14	45662650	105059083	36239	-0.0015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	15	21238778	99701830	44508	-7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	16	593460	87907437	40846	0.0016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	17	933971	78510305	36971	6e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	18	319586	75210228	42642	0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	19	235018	63570038	23947	-9e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	20	403764	61690281	37263	-0.0018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	21	14269492	29197509	9496	0.0018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	21	29197818	29199538	7	-0.7864
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	21	29200022	46503202	11073	-0.0032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	22	15803930	46438591	15863	0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	22	46439434	46440863	2	-1.4413
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	22	46494918	47717016	1053	0.0066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	X	3167107	24921149	9355	0.0074
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	X	24921295	24921532	2	-4.3765
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	X	24921928	64280934	15266	0.0126
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	X	64281916	64283744	2	-3.5646
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	X	64287487	69421394	2092	7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	X	69421489	69421512	2	-4.0068
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	X	69423244	131043442	26554	0.0144
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	X	131044135	131044365	2	3.0605
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_A11_895730	X	131045069	154558783	10435	0.0091
