Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	1	3218610	33894458	15874	-0.1148
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	1	33898166	33899014	3	-1.3965
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	1	33899702	85979932	31361	-0.0538
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	1	85980350	86003166	11	0.7453
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	1	86006009	149879545	20511	-0.0478
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	1	149881398	151527633	584	0.4587
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	1	151528376	247813706	60743	0.9995
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	2	484222	40918001	23823	-0.0673
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	2	40922082	40922098	2	-1.7457
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	2	40922298	66754053	14825	-0.0675
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	2	66756356	69042521	1434	-0.6342
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	2	69043321	144187994	34813	-0.0689
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	2	144213157	242476062	56314	0.3174
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	3	2212571	197538677	106317	-0.0239
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	4	1053934	114010052	62550	-0.0199
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	4	114010252	114021169	5	-1.4687
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	4	114021233	123240619	5266	-0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	4	123242193	123243054	2	-1.6451
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	4	123243541	144615492	11418	-0.0142
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	4	144624327	144641391	14	0.6055
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	4	144642492	157708850	7193	-0.0266
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	4	157709164	157715977	9	-1.3608
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	4	157720124	188763651	16215	-0.02
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	5	914233	1300584	59	0.2809
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	5	1308552	106745585	55666	-0.5806
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	5	106752337	142859606	21257	-0.0289
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	5	142862611	142862653	2	-1.3364
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	5	142866564	144457130	976	-0.0199
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	5	144457667	178943345	21701	-0.598
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	5	178946551	178947654	2	-2.844
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	5	178947661	180360469	653	-0.6635
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	1014281	50904239	29896	0.3167
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	50904256	62236967	4003	-0.0221
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	62306468	62328225	17	-1.3145
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	62332566	75593240	7366	-0.0155
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	75610212	98410689	12284	0.3573
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	98411344	98476651	22	-0.0526
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	98489337	98538329	26	0.377
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	98539519	98574920	28	-0.0202
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	98575711	99748996	789	0.4025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	99749177	104981445	2873	-0.0126
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	104983139	107302955	1500	-0.6264
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	107310106	107359900	26	-0.0716
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	107360290	107743589	215	-0.6864
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	107752076	107857388	62	-0.0225
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	107861550	108053906	173	-0.6977
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	108055170	108236765	150	-0.099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	108238122	109119419	479	-0.6591
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	109123629	111311471	1306	-0.0913
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	111316619	111343997	24	0.2962
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	111350700	111512494	88	-0.0705
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	111518129	111580561	42	-0.7377
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	111583598	112240332	398	-0.0795
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	112249630	119804134	4037	-0.6103
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	119806301	123327130	1961	-0.034
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	123328804	123880960	256	0.3601
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	123882985	124638018	444	-0.0345
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	124640501	133294032	5501	0.3421
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	133294311	133376699	41	0.0353
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	133378449	135335429	1308	0.343
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	135342254	135343238	2	1.6467
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	135349570	142079343	3893	0.338
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	142086954	157006446	9971	-0.0296
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	6	157011792	170903919	7226	-0.6064
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	7	705284	708864	3	-0.253
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	7	712096	3365002	1031	0.2887
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	7	3509969	5399742	762	0.8136
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	7	5402606	9581363	1707	0.3149
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	7	9581746	11096790	578	0.8709
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	7	11102157	13328334	1590	0.3727
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	7	13328621	15318221	1517	0.8829
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	7	15318473	15914461	382	0.373
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	7	15915899	15956470	35	-1.3826
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	7	15972392	31867050	9788	0.34
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	7	31868613	34720997	1826	0.8496
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	7	34730255	41407059	4391	0.3213
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	7	41407542	45341972	2089	0.8227
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	7	45343360	45672415	171	0.3932
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	7	45672823	48957686	2314	0.8511
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	7	48960594	49549949	410	0.3619
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	7	49555700	49697895	99	-0.5744
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	7	49701326	63128931	4679	0.3487
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	7	63133126	88111360	11705	-0.5652
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	7	88114339	90060169	110	0.3743
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	7	90062858	116235109	13611	-0.5728
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	7	116235379	130366668	7454	0.3481
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	7	130370267	158385118	14977	-0.5977
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	8	617667	17922396	9024	0.3592
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	8	17922925	17924739	2	1.5856
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	8	17925209	90333705	39810	0.3366
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	8	90333735	90333857	2	-1.0709
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	8	90333934	145232496	32666	0.3318
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	9	789932	21144378	12952	-0.5715
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	9	21145448	21864552	442	-4.4598
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	9	21864673	22005317	92	-3.3002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	9	22005330	23513415	938	-4.629
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	9	23514723	25929148	1467	-0.555
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	9	25934932	26257238	209	0.3625
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	9	26433917	90896429	21021	-0.595
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	9	90898027	90904378	2	-3.3296
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	9	90905263	105589801	8962	-0.6211
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	9	105591643	140938752	21820	0.3054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	10	415240	135225087	80709	-0.5836
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	11	456120	86167202	46036	-0.0482
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	11	86172735	134142530	31116	-0.5926
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	12	889902	24393754	13702	-0.0456
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	12	24395202	24395272	3	-1.83
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	12	24396944	63342481	19169	-0.0504
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	12	63344993	63345003	2	-1.4722
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	12	63347469	69547121	3944	-0.0467
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	12	69547642	69547796	2	1.4098
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	12	69548475	70752968	791	-0.0472
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	12	70753020	70754083	3	-1.0575
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	12	70771592	75946678	2875	-0.0093
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	12	75947644	76119297	135	0.3797
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	12	76119371	77619331	941	-0.0232
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	12	77627445	77627677	2	-1.4152
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	12	77631245	83553124	3742	-0.0143
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	12	83553318	83559603	6	-1.0123
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	12	83562174	96343107	7658	-0.04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	12	96347016	96942299	394	0.2943
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	12	96942319	133161346	20515	-0.0537
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	13	19450806	22284439	1163	-0.1105
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	13	22287036	114978460	55439	0.301
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	13	114978473	114987458	7	0.0536
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	14	20501368	46118751	13065	0.3319
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	14	46120738	46351146	65	-0.6602
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	14	46388163	105988038	36311	0.3085
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	15	23687685	70520077	26612	0.3062
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	15	70524507	70525379	3	-0.7594
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	15	70529197	101884307	17891	0.2997
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	16	653459	668985	9	0.1826
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	16	677854	2581359	492	-0.1499
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	16	2581462	4877958	992	0.2224
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	16	4878402	4878588	2	-0.938
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	16	4878889	83734691	36527	0.3257
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	16	83743546	89379936	2748	-0.6679
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	17	987221	14127668	7446	-0.6554
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	17	14127718	65356936	21706	-0.1014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	17	65363813	65363843	2	1.0961
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	17	65364953	80917016	7802	-0.0929
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	18	329586	13559939	7799	-0.5787
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	18	13561940	13562149	3	-2.7449
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	18	13562177	55148861	22910	-0.5581
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	18	55149707	55149894	2	-2.1923
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	18	55150271	59509813	2846	-0.5609
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	18	59517885	59529301	9	-1.9599
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	18	59529472	77109240	9010	-0.5758
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	19	284018	7300055	2025	0.1951
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	19	7304492	7344986	6	-0.7148
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	19	7397015	58878226	21912	0.2318
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	20	455764	16817706	10480	0.6026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	20	16824361	16824480	2	-1.3817
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	20	16824933	62219837	26793	0.5684
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	21	15347621	25317259	5927	-0.0404
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	21	25318749	25328221	11	-0.5846
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	21	25328443	47678774	14633	-0.0752
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	22	17423930	18613737	756	0.2481
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	22	22096802	32479929	5359	-0.1295
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	22	32482606	32484188	4	-0.926
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	22	32484201	38352370	4112	-0.1213
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	22	38353041	38871585	236	0.1793
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	22	38873878	39406194	231	-0.1996
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	22	39407947	39490420	21	0.3868
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	22	39496199	45573450	3502	0.6725
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	22	45576584	45577061	2	-1.4438
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	22	45581632	46396243	491	0.5255
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	22	46425538	48766147	1772	-0.1126
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	22	48766824	48766911	3	-1.1657
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	22	48768196	49331012	418	-0.0948
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	X	3157107	6371866	719	0.1045
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	X	6372252	6389918	25	-0.8199
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	X	6390189	8994311	300	0.0904
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	X	8995187	8999184	2	-5.4623
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	X	8999694	126380342	50232	0.0642
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	X	126381206	126382680	4	-4.0382
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B06_895700	X	126383388	154905589	12371	0.0341
