Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	61735	235728	26	0.4505
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	235938	2454930	464	-0.0786
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	2455633	2456203	3	-1.5151
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	2458619	25583341	13653	-0.0065
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	25593128	25663310	32	0.8052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	25663344	39458110	7387	-0.012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	39458204	39458881	3	-1.456
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	39459560	41344619	956	-0.036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	41346428	41349252	3	-2.8886
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	41351541	62114006	13090	-0.0214
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	62114181	62119809	4	-1.3256
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	62119978	72746567	7354	-0.0143
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	72746581	72763370	12	-0.6771
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	72768418	83815957	7130	-0.0184
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	83816477	83908704	53	0.3067
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	83908912	102750036	12232	-0.0279
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	102751712	102752929	2	-2.0932
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	102753335	106002162	1635	-0.0351
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	106012754	106024055	20	0.4571
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	106024070	110227515	2663	-0.0257
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	110232974	110240178	17	-1.0456
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	110242953	111377368	842	-0.002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	111377565	111388226	38	-0.5856
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	111392067	120214873	5929	-0.0183
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	120221186	120398348	146	-0.4022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	120398382	144527695	255	0.5356
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	144542773	147554183	1029	0.9829
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	147554301	149617488	292	0.5943
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	149644953	150853058	540	0.9254
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	150856391	151377376	235	0.6064
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	151377827	151695271	175	0.926
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	151699473	151853612	106	0.66
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	151854076	152555706	432	0.9657
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	152555767	152586238	30	2.3793
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	152586278	152759678	175	0.9845
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	152761923	152768259	32	1.8175
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	152768281	154936703	1261	0.9166
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	154940943	156083468	471	0.6732
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	156088638	156271819	88	0.2158
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	156273061	157977753	1061	0.6698
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	157993097	158417540	317	0.9433
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	158425271	159925431	1140	0.6737
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	159927798	159928711	3	-0.2866
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	159931139	160006452	54	0.6893
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	160006574	166438546	4808	0.2342
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	166439392	170367110	3013	0.6583
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	170367650	170382578	16	1.0411
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	170382737	171083242	405	0.6582
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	171088560	173518832	1619	0.243
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	173518993	174991802	744	0.6409
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	175000357	175128779	87	1.0007
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	175130154	177196068	1384	0.703
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	177196418	180485519	2215	0.2386
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	180488213	181955507	1067	0.6554
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	181960089	182974442	701	0.956
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	182977482	184350141	980	0.6581
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	184354199	184671513	215	0.2392
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	184674409	185633760	605	0.6579
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	185640218	189028989	2135	0.2379
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	189030019	189030344	3	-0.81
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	189031361	189429406	257	0.2636
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	189429722	189430147	3	-0.7823
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	189431382	189975138	430	0.2323
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	189975477	189975597	6	1.0958
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	189980756	190979186	666	0.2299
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	190979336	193155792	1391	0.6491
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	193156279	193156317	2	2.2469
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	193156332	193308661	149	0.6489
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	193308910	193775802	343	0.9781
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	193777572	194626755	543	0.6621
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	194628769	196739972	1377	0.2225
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	196740211	196815791	86	0.7098
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	196816730	200002126	1958	0.2288
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	200007391	202309040	1623	0.663
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	202316238	204187207	1182	0.2494
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	204189244	207483576	1970	0.6654
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	207483681	208455179	725	0.2421
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	208456813	208457920	5	1.035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	208458173	214510115	4325	0.237
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	214510760	215754287	876	0.66
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	215757389	215855994	50	0.2404
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	215858193	215862105	14	-0.4915
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	215866009	216819427	704	0.2376
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	216820004	221470359	3308	0.6529
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	221472290	221904903	323	0.2216
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	221905776	223841226	1222	0.6691
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	223841682	224086863	168	1.016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	224102438	224161435	9	0.4584
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	224163726	224455602	158	1.0102
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	224458468	226523560	1255	0.6408
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	226526871	230493132	2535	0.2377
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	230493445	231633151	820	0.6874
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	231635258	231954427	191	1.0207
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	231955726	236828656	3651	0.6531
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	236830024	237995299	1002	0.241
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	237995413	238778606	681	0.6462
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	238783059	239263991	378	0.2188
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	239264404	240394015	881	0.65
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	240394032	243048740	2082	0.2202
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	243049874	243053057	2	-1.3602
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	243054702	243120692	67	0.3428
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	243120996	244282054	698	0.6615
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	244283404	245162087	524	0.9911
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	245167193	245934299	581	0.6734
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	245940334	247386117	978	0.9405
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	247386825	247390862	5	0.6113
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	247392162	247517799	80	0.2514
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	247524963	248725234	738	0.6434
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	248736075	248794464	31	-0.294
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	1	248795289	249224388	149	0.5955
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	12784	4205687	2989	-0.0585
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	4213864	4223167	36	-0.5822
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	4223512	7711148	2946	-0.0355
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	7711227	7714913	3	-1.7405
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	7715663	12271060	3266	-0.0248
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	12271846	12272548	2	-1.8465
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	12272871	34716936	14867	-0.0197
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	34716979	34737057	28	-0.7049
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	34737163	35908222	838	-0.0273
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	35908340	35908737	2	-1.5553
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	35909000	35967385	35	-0.0695
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	35968036	35997504	11	1.2523
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	36000419	90248524	35188	-0.024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	90248784	92160221	122	0.3828
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	92180514	96161700	294	-0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	96166982	96167864	3	1.1097
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	96170570	97713773	537	0.0141
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	97715154	98016540	80	0.3753
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	98017788	98019683	4	-0.6089
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	98019839	98225614	32	0.425
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	98241192	130795379	19899	-0.0247
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	130817339	130874488	14	0.732
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	130874876	146862085	9571	-0.0271
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	146864404	146866934	24	0.7113
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	146877806	151030802	2261	-0.037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	151031451	151037732	5	-1.0615
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	151039208	180205249	18081	-0.0276
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	180209323	180209366	2	-2.7775
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	180213669	184793800	2927	-0.0254
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	184793851	184802441	18	-0.6885
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	184808589	236858216	32078	-0.0221
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	236858701	236858918	2	-2.0118
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	236861826	237355787	260	-0.0416
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	237358248	237705892	238	-0.3464
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	237706695	238467505	607	-0.0233
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	238472864	238815252	252	-0.3573
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	2	238827934	243089456	2329	-0.011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	60345	34153293	25095	-0.042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	34154731	34179261	14	-0.7542
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	34184230	41813362	5126	-0.0402
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	41817375	41824432	5	-1.0074
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	41826229	53031736	5508	-0.0341
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	53031750	53033650	15	0.7718
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	53033753	59740905	4588	-0.0375
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	59740954	59741449	3	-1.3224
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	59741515	65185849	4972	-0.0469
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	65188453	65210452	54	-0.837
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	65216349	68746164	2418	-0.0383
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	68746259	68749691	25	0.3575
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	68749856	75469493	4882	-0.0386
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	75483245	75548734	28	0.2459
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	75549718	75596246	14	0.7219
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	75608639	96230656	9533	-0.0374
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	96237383	97923104	880	0.2429
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	97925742	97926120	2	1.5465
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	97929864	102946840	2842	0.2274
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	102948373	102948971	9	0.8722
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	102948986	104347409	850	0.2281
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	104347652	104348224	2	-1.2765
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	104348709	129762859	15660	0.2348
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	129763698	129806236	52	-1.2028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	129806924	135713583	3905	0.2291
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	135713622	135713755	2	-1.4906
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	135714105	136019099	127	0.2298
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	136022951	136025426	2	1.6057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	136038541	162092183	15950	0.2275
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	162103074	162106315	2	-1.4245
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	162108640	162513149	291	0.2501
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	162513459	162521623	7	0.9273
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	162524858	162530870	4	0.0822
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	162532950	162540490	7	-1.6735
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	162545716	162625980	47	0.5718
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	162625995	162626603	3	-1.5408
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	162628614	162714517	70	0.2911
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	162717727	162719562	2	-2.5912
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	162726159	169348944	3837	0.2329
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	169349862	169352458	3	-1.0912
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	169352825	183291464	8663	0.2258
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	183293954	183294399	2	-1.3713
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	183295294	186395113	1846	0.2392
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	186395323	186406123	25	0.6473
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	186406138	192877902	4736	0.2325
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	192877962	192882903	19	-1.4349
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	3	192886435	197896118	2701	0.2425
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	12281	66719	58	0.4633
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	68821	3897744	1585	-0.0176
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	3900852	4177809	80	0.2963
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	4182002	10210390	4073	-0.0028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	10214160	10231498	29	3.0504
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	10234214	10239297	11	0.549
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	10240663	10390715	167	-0.0154
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	10392354	10400668	16	-2.6145
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	10402718	34779004	16780	-0.0288
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	34779025	34829872	42	0.6816
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	34829913	49089374	8956	-0.033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	49093786	49590656	32	0.6365
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	49620885	63667834	7021	-0.0326
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	63669936	63671587	7	0.6983
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	63671662	63959698	157	-0.0091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	63971000	63984186	10	0.5232
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	63986689	64707605	413	-0.0155
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	64707754	64708223	5	-1.217
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	64708258	69372003	2881	-0.0216
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	69374941	69489335	65	-1.8283
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	69505115	93456732	14686	-0.036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	93459765	93889952	218	-0.5339
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	93890098	108066842	8376	-0.0316
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	108068235	108068413	6	0.8669
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	108071519	125459405	10558	-0.028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	125460351	125462935	3	-1.43
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	125463025	138234803	7325	-0.0217
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	138235156	138442415	128	0.4834
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	138454142	143793939	3517	-0.0427
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	143794072	143794101	2	-1.5604
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	143794389	161871883	10926	-0.03
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	161873606	161912396	57	0.2572
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	161912988	172369346	6647	-0.0347
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	172374884	172377444	8	0.9989
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	172377458	172987928	399	1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	172989148	172989533	12	-2.0665
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	172995979	190195118	11715	-0.0416
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	190195622	190199264	3	-2.6667
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	190199771	190863742	353	-0.0497
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	4	190869100	191027923	33	0.3433
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	5	15532	626278	275	-0.0715
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	5	637277	637290	2	-2.2097
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	5	642732	46271108	30500	-0.0353
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	5	46271930	46273502	6	1.214
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	5	46278212	56346351	4445	-0.0291
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	5	56347622	56350866	12	-0.6748
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	5	56356078	57321646	623	-0.0214
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	5	57326027	57333533	32	1.3371
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	5	57338357	68824217	7295	-0.0337
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	5	68825001	70654072	31	0.6023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	5	70660751	81418763	6888	-0.0345
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	5	81419278	81427482	3	-2.8172
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	5	81428038	117386617	22019	-0.0307
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	5	117388422	117389085	11	-0.868
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	5	117404340	140218722	13810	-0.0282
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	5	140223836	140243756	13	-1.9182
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	5	140252163	152437392	8130	-0.0292
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	5	152441089	152914953	328	0.2321
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	5	152918858	155472055	1744	-0.0272
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	5	155472133	155482729	19	0.4403
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	5	155495250	164512112	5954	-0.0342
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	5	164512911	164525657	5	-1.2958
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	5	164526703	171532453	5217	-0.036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	5	171532497	171532887	3	-1.3967
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	5	171533782	175373508	2893	-0.0358
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	5	175387546	175420896	7	0.9446
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	5	175426693	179816613	2254	-0.0312
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	5	179816733	179818920	3	-1.3946
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	5	179820819	180790320	484	-0.0212
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	149661	254283	101	0.2059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	257353	355198	71	0.6626
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	355360	31277686	22256	0.2322
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	31280823	31296451	12	-2.0905
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	31309924	32449050	505	0.1405
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	32449523	32657681	74	-0.5763
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	32658079	46420923	8768	0.2484
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	46421333	48930865	1637	-0.0258
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	48931729	48935200	4	-1.3411
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	48946563	55319676	4211	-0.0342
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	55319741	55320207	2	-1.6697
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	55320311	63810604	2668	-0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	63812366	66389161	1489	-0.3492
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	66393348	66399772	10	0.3843
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	66400229	66994922	388	-0.3443
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	66996611	67037554	42	-0.097
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	67038021	67043235	10	-1.6597
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	67043358	74591858	4999	-0.3681
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	74592225	74601410	10	0.4567
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	74603555	75082674	320	-0.3514
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	75084426	75090472	5	0.5095
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	75090920	77014948	1142	-0.3888
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	77016900	77016926	3	1.3949
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	77016993	77288461	184	-0.3171
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	77288734	77289288	2	-3.326
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	77289311	77436532	108	-0.3841
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	77439868	77452757	21	0.4821
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	77461073	78949821	961	-0.3797
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	78950227	79055001	143	-0.0524
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	79055191	101213310	13936	-0.3724
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	101213723	101215184	2	-2.2323
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	101216053	103728225	1485	-0.3575
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	103730493	103762061	54	0.2788
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	103765470	161032565	36850	-0.3833
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	161032719	161033283	5	1.5379
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	161068042	170982534	7225	-0.4142
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	6	171050379	171051005	2	0.8003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	43355	1054517	247	0.4031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	1062366	1140515	38	-0.13
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	1141245	22434780	15813	0.4774
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	22435472	22436487	2	-3.8299
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	22438754	26132290	2767	0.4621
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	26142392	26145413	4	-0.492
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	26147219	38387443	8679	0.4713
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	38391365	38398047	5	-1.139
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	38400957	56028347	12244	0.4788
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	56031060	56033157	3	-0.6538
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	56036043	70420438	5058	0.5074
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	70423250	70426141	2	-2.8872
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	70428243	71603692	803	0.4841
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	71604236	71611665	2	-0.9303
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	71612465	72219107	334	0.5128
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	72221166	72225354	3	1.8194
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	72234742	104472647	18178	0.4753
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	104475567	104476526	4	1.5826
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	104476535	109433798	3185	0.4691
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	109437092	109437100	7	-1.713
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	109437101	109437772	8	-0.7186
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	109437774	109441212	9	0.3196
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	109441244	109453910	11	-1.9211
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	109453982	111195900	1157	0.4856
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	111196125	115311870	2313	-0.0422
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	115317538	126044974	6563	0.4718
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	126045482	126046615	12	1.2828
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	126046876	133789965	4729	0.4746
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	133789997	133795634	5	1.3948
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	133795665	141763124	5209	0.475
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	141769643	141792107	42	-0.2288
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	141795281	142474939	450	0.5112
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	142476719	142486560	31	1.2885
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	142488688	158117595	9929	0.4617
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	158128588	158132165	2	2.3376
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	7	158136986	159127004	639	0.4385
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	31254	1137085	685	0.1908
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	1140588	1154380	26	-0.3061
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	1157707	2039437	715	0.2228
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	2039754	2049241	11	-0.5413
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	2049436	3548250	1638	0.2028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	3548551	3553335	8	-0.6773
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	3553517	3565900	31	0.0159
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	3565945	3584270	35	0.3279
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	3584423	3597586	29	0.0275
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	3598802	3600055	6	-1.1106
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	3600189	5075593	2210	0.2035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	5075648	5075952	8	1.0736
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	5076089	5594267	692	0.1772
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	5598726	5604327	26	-0.8358
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	5607088	7250380	1734	0.1967
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	7254291	7641519	101	1.0864
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	7643127	8002373	100	0.653
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	8002381	8009204	5	1.3455
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	8017930	10116058	1821	0.2257
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	10116730	10129944	12	-0.5287
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	10130696	11895245	1401	0.2206
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	11934660	12034997	10	1.287
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	12162739	12232281	10	0.3126
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	12232416	12239835	8	-1.2322
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	12240162	12443055	93	0.7553
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	12473543	115632043	63414	0.2363
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	115634487	115638350	14	-0.7605
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	115638395	115640988	10	0.2018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	115641002	115641731	11	-0.4615
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	115650697	129752174	9801	0.2415
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	129755240	129764085	5	-2.1578
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	8	129777454	146298155	11260	0.2421
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	9	46587	6331271	6096	-0.3546
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	9	6331274	6335760	5	-2.3321
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	9	6341627	21991923	13377	-0.337
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	9	21993964	22472338	326	-0.7622
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	9	22479144	38771831	11291	-0.3329
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	9	38787493	44727859	287	-0.0106
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	9	44729751	44855737	35	0.4809
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	9	44866028	47217176	95	0.1124
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	9	65616971	65630946	3	-1.3578
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	9	65672607	68183981	57	0.0191
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	9	68186051	68186057	4	1.7858
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	9	68186059	71035452	236	0.0832
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	9	71035703	104757230	23495	-0.3348
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	9	104757385	105344545	438	-0.7305
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	9	105355422	141091394	23951	-0.3268
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	10	72759	2057048	1449	-0.4215
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	10	2059287	2342262	261	-0.8787
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	10	2342539	3946744	1549	-0.405
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	10	3946975	3948254	5	-2.4666
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	10	3949016	24375263	15889	-0.3839
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	10	24377674	24378951	13	0.7108
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	10	24379007	38677869	9812	-0.377
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	10	38679109	42853702	141	-0.0461
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	10	42864101	46293619	2313	-0.3675
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	10	46312487	46674180	10	0.3923
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	10	46691159	47058868	84	-0.2439
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	10	47058899	47058988	6	-1.5207
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	10	47059186	51593709	2000	-0.3614
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	10	51595847	51981971	47	-0.0048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	10	51989181	59914536	5977	-0.3569
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	10	59915056	59981221	43	-0.8048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	10	59984375	67300074	4962	-0.3752
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	10	67305069	67325453	37	0.0467
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	10	67326066	80055274	8170	-0.3612
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	10	80058892	80059372	2	-2.5555
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	10	80060301	95405207	10496	-0.3658
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	10	95405661	95406639	2	-2.7608
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	10	95407645	130435621	24069	-0.364
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	10	130435783	135449357	3414	-0.8808
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	10	135449977	135506704	4	-0.1293
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	11	198510	4967650	2470	-0.3738
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	11	4968117	4976334	32	-1.6632
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	11	4976371	8958013	3116	-0.3784
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	11	8958492	8964319	4	-3.8905
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	11	8964938	12933933	3101	-0.3684
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	11	12934125	12934158	2	-2.2238
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	11	12934243	18961178	4032	-0.3677
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	11	18961281	18971175	23	0.2333
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	11	18971380	20843891	1667	-0.3732
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	11	20844852	20849758	3	-2.3607
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	11	20850230	55376498	20130	-0.3657
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	11	55376511	55452534	48	-1.1687
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	11	55452977	59011167	2182	-0.3665
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	11	59014658	59014969	4	-2.087
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	11	59019961	67421341	4010	-0.3655
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	11	67422079	67422232	2	-2.8624
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	11	67423358	67768796	104	-0.1011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	11	67770067	81503468	8274	-0.3669
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	11	81503992	81517158	10	-1.8151
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	11	81522632	90213313	5558	-0.3656
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	11	90213472	90214024	2	-3.5233
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	11	90215342	92304308	1530	-0.3746
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	11	92305374	92669669	283	-0.8125
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	11	92669890	133057966	28904	-0.3709
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	11	133058341	133059019	2	-2.7943
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	11	133059597	134932986	1402	-0.3928
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	11	134933513	134944770	8	-1.1955
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	12	150442	9630556	6201	0.2127
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	12	9633870	9707322	21	-1.2571
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	12	9713674	11215372	1044	0.2147
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	12	11216849	11241532	14	1.0436
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	12	11251874	20335697	6200	0.2016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	12	20337185	20337464	2	-1.8257
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	12	20341458	27424271	5011	0.2051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	12	27424468	27424531	2	-1.2434
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	12	27426479	27645992	163	0.197
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	12	27647741	27651362	28	-1.1439
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	12	27657161	30243539	1894	0.2104
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	12	30243561	30243722	8	0.9068
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	12	30243933	31261698	875	0.2303
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	12	31265057	31407123	92	1.0301
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	12	31409879	31907274	283	0.202
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	12	31908357	31909908	2	-2.3094
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	12	31917220	37987726	1888	0.2385
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	12	38012567	38014018	2	-1.8377
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	12	38034358	45904438	4774	0.2152
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	12	45905840	45909537	3	-2.2937
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	12	45913292	74312885	17343	0.2131
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	12	74312927	74337278	13	0.7214
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	12	74338741	124152962	31976	0.2166
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	12	124156762	126938610	2057	-0.0693
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	12	126940156	133778189	5123	0.4232
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	13	19026949	19450821	122	0.2745
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	13	19450905	24630915	3553	0.0113
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	13	24632395	24633050	3	-1.9884
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	13	24635254	31510065	5189	0.0229
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	13	31511655	31512404	2	-1.9325
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	13	31512486	67172779	22856	0.0231
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	13	67176219	67177783	2	-2.2331
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	13	67178344	72476988	3379	0.0268
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	13	72477555	72480556	4	-2.4061
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	13	72480605	95987018	15476	0.0266
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	13	95989190	95999182	10	-1.1642
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	13	96000749	103103615	4779	0.0229
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	13	103104224	103626942	421	-0.2719
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	13	103627384	106372757	2284	0.0191
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	13	106372957	106382965	11	-0.8374
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	13	106385740	112890027	5098	0.0149
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	13	112894246	112894257	2	-3.3416
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	13	112897703	115108397	1043	-0.0101
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	14	19002124	20422583	189	0.064
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	14	20423372	85838896	41837	-0.3611
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	14	85842305	85843334	2	-2.9126
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	14	85845170	107153067	13319	-0.3627
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	14	107153166	107179496	22	-0.9537
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	14	107179847	107285437	69	-0.3675
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	20016328	20581454	102	0.4909
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	20581455	20586957	15	-0.2583
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	20590027	22752709	316	0.4938
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	22755172	34727189	7391	0.2411
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	34727622	34810088	56	-0.5586
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	34813119	45003114	6130	0.2359
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	45004573	45043912	28	-0.5498
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	45045101	45397468	159	0.4795
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	45405766	45921608	271	-0.3777
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	45922383	70793437	16607	-0.0243
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	70797244	71153326	225	-0.3363
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	71154986	72902612	1022	-0.0493
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	72903338	72963285	11	0.492
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	72964156	73942342	543	-0.0442
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	73947181	74470328	395	-0.3409
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	74470761	74502150	20	0.3632
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	74503572	75286501	334	-0.3365
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	75296787	76891627	693	0.4843
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	76891741	76895775	19	1.1635
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	76902179	77266776	167	0.4252
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	77269992	77356310	41	-0.3354
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	77356561	77598664	92	0.261
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	77599597	77682858	44	-0.3747
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	77690116	77837982	83	-0.0342
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	77838086	78864786	589	-0.374
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	78865124	80495244	1200	-0.0255
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	80495633	80578840	65	-0.3551
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	80579670	80610424	24	0.0401
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	80611525	80944405	247	-0.3308
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	80949502	81014220	41	0.455
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	81014621	81691199	489	-0.3486
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	81691448	81974894	162	-0.0465
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	81976043	81981745	5	0.7707
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	81981950	82379182	269	0.0169
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	82379958	83108839	138	-0.3758
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	83169549	83521818	218	-0.0083
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	83522102	83551296	27	-0.3651
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	83551383	83649946	55	0.3241
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	83664641	86200761	1322	-0.3276
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	86203256	86500989	262	-0.0375
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	86501210	86521837	18	-0.8273
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	86522213	86566530	43	-0.2788
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	86568066	86758895	144	-4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	86758914	86778589	28	-0.4524
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	86784034	87126300	268	0.5155
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	87129559	87139933	11	-0.315
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	87142821	87617693	484	0.4435
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	87618388	87677206	59	-0.3539
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	87686980	87842416	116	0.2313
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	87843405	87846656	6	-0.5576
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	87848721	89020682	894	0.2438
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	89022966	89208590	125	-0.3447
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	89215697	89261134	20	0.063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	89262957	91041119	1111	-0.3677
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	91046499	91193766	77	0.0049
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	91194598	91205622	11	-0.5162
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	91206328	92765755	1256	-0.0191
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	92765874	92766294	3	1.6072
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	92766758	93355403	569	-0.0312
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	93358990	93450476	41	-0.3286
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	93452297	93675322	147	0.1986
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	93676394	93677014	4	0.9502
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	93677911	93696202	17	0.216
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	93696651	93701882	6	-0.4943
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	93702680	93746598	39	0.239
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	93746761	93747449	5	-0.8325
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	93748160	99304975	4293	0.2342
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	99307083	99350357	31	-0.3639
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	99352341	99554059	140	0.2527
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	99559206	99566181	4	-0.4447
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	99566436	99788644	178	0.2589
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	99788763	100516968	451	-0.3017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	100517298	100997700	411	5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	100998085	101239502	219	-0.3958
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	101240045	101679765	323	0.5217
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	101680159	101683498	3	-0.7168
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	15	101685552	102469040	557	0.4481
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	16	60777	9218887	6584	-0.0447
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	16	9222243	9232888	11	-0.8696
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	16	9236299	12648859	2825	-0.0377
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	16	12648978	12648995	2	2.2205
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	16	12650247	16084204	2171	-0.0215
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	16	16084929	16098475	10	-0.8054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	16	16099159	27825322	6921	-0.0172
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	16	27827381	27834971	13	-0.7416
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	16	27835781	31944081	1482	-0.0277
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	16	31947241	33859076	323	0.4341
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	16	33862863	34459709	176	0.0948
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	16	34466571	34755566	168	0.6152
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	16	34757071	55796594	6604	-0.0073
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	16	55798222	55798779	3	2.2627
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	16	55804348	70842097	9054	-0.0138
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	16	70854381	71202489	140	0.7222
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	16	71202797	88773893	15272	-0.0396
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	16	88774569	89093256	79	-0.3575
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	16	89094230	90287535	527	-0.0627
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	17	526	44201454	23502	-0.0241
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	17	44204373	44752300	142	-0.4893
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	17	44764994	77245660	19827	-0.0271
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	17	77246216	77246390	2	-2.6537
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	17	77247044	81049726	1751	-0.0301
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	18	11543	24365863	13905	0.2249
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	18	24365915	24366145	3	-2.0905
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	18	24366379	25920998	1031	0.2197
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	18	25923362	25946744	16	-0.5754
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	18	25949622	38258616	7864	0.2174
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	18	38258705	38265389	21	0.9364
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	18	38268024	51262445	8964	0.223
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	18	51263433	51267193	14	0.6434
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	18	51267210	51971393	423	0.2128
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	18	51971540	52044641	51	-0.1066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	18	52051334	63203943	7684	0.2167
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	18	63204323	63207257	11	1.3361
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	18	63207273	78015057	10793	0.2053
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	19	90910	6229586	1922	-0.0462
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	19	6230692	6230751	2	-2.5116
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	19	6231869	20746190	7139	-0.023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	19	20759077	20759858	2	-1.9366
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	19	20765130	28198439	2253	-0.0069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	19	28209011	33899909	4131	-0.369
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	19	33903402	34322659	305	-0.8127
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	19	34327429	59097854	13512	-0.3601
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	20	61305	1552503	1184	0.2488
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	20	1557190	1560951	20	-0.4551
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	20	1560999	1600432	52	0.6318
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	20	1600538	13434078	9158	0.2455
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	20	13435157	14076211	330	-0.029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	20	14080114	14794361	434	0.2486
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	20	14795616	14795753	5	1.1372
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	20	14797572	23421101	7071	0.2475
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	20	23422159	23423097	3	-0.7173
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	20	23423977	25673348	1576	0.241
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	20	25674050	25738764	31	0.7036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	20	25740998	29436802	191	0.257
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	20	29441595	29505893	19	-0.2826
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	20	29527893	52679195	14973	0.2422
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	20	52679226	52679379	5	1.1755
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	20	52679492	59569516	5631	0.2569
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	20	59569737	59573296	7	-0.506
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	20	59576820	62375796	1553	0.26
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	20	62378349	62378364	2	-2.2737
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	20	62380542	62956153	232	0.196
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	21	10736871	48084820	24378	0.0276
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	21	48085751	48096957	8	0.3947
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	22	16052528	51234455	23553	0.2428
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	X	168477	4259429	1208	-0.0077
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	X	4260252	4579128	240	-0.3934
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	X	4584401	5764607	968	-0.01
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	X	5764965	5764978	2	1.3721
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	X	5765026	5780665	41	0.2174
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	X	5780902	5780990	3	1.1526
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	X	5785503	7316840	1152	0.0078
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	X	7318293	7495386	133	-1.4874
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	X	7496168	25811099	12009	-0.0068
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	X	25814128	25814596	2	-1.7356
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	X	25815034	35162224	6290	0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	X	35164508	35489061	179	0.2754
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	X	35489151	76353650	17893	0.0112
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	X	76362292	76378656	2	-1.9413
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	X	76378658	76437473	8	0.0296
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	X	76471935	76523952	7	-0.8232
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	X	76545159	84531746	3997	0.0114
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	X	84532257	84615629	46	0.3349
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	X	84615886	93281237	4650	0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	X	93283960	93355419	66	-0.358
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	X	93356017	103214753	5417	-0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	X	103221358	103243043	11	0.7531
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	X	103243216	152191148	29000	0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	X	152192161	152193720	7	-0.9367
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	X	152194409	155182354	1193	0.036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	Y	2650438	2915759	134	-3.1938
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	Y	2928908	6101425	737	-2.4938
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	Y	6107901	6296423	85	-4.2491
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	Y	6299046	7399842	468	-3.1008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	Y	7400746	9775211	1205	-3.4976
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	Y	9784949	15590276	949	-3.1762
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	Y	15590342	15594523	3	-7.7452
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	Y	15594889	19063565	1842	-3.3179
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	Y	19068122	19096363	10	-4.8265
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	Y	19096488	20842231	809	-3.6541
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	Y	20848128	21024613	93	-4.3746
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	Y	21025062	23859163	1085	-3.3796
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	Y	23859468	26427522	566	-3.7644
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	Y	26430674	26510575	27	-1.8338
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	Y	26510799	27274970	92	-4.3001
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	Y	27298371	27529084	37	-2.3825
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	Y	27535030	27607884	25	-3.7573
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	Y	27609288	27720551	33	-2.7352
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	Y	27721084	28277692	195	-3.8564
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	Y	28289727	28321752	12	-5.5478
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	Y	28322019	28452016	51	-3.5482
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B09_895840	Y	28457337	59018259	176	-2.7124
