Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	51598	218569	18	0.3361
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	218592	554484	14	-0.3126
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	593453	2511290	486	0.21
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	2512896	2539225	8	-0.2666
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	2542686	3208470	230	0.3139
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	3208783	4693974	1029	0.034
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	4696418	4697358	2	-1.3498
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	4697881	8620709	2527	0.0193
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	8621197	8626646	4	-0.7042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	8627137	9512000	535	0.0133
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	9519068	9519452	2	-1.3206
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	9524960	12276894	1409	0.0118
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	12278074	12278090	2	-1.4652
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	12279675	15350653	1715	0.0115
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	15351396	15362449	14	0.4477
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	15362518	17067742	838	0.0582
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	17076084	17148828	61	-0.2408
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	17150527	25455928	5271	0.016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	25465715	25519276	25	0.7273
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	25519331	110029038	52537	-0.001
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	110034497	110041701	17	-1.0983
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	110044476	111177743	841	0.0053
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	111178891	111189749	39	-0.8227
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	111193590	112497610	1080	-0.0114
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	112497716	112507663	30	-0.3799
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	112507672	143560896	5240	-0.0102
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	143560901	143579717	4	1.2118
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	143580441	143613217	40	0.046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	143613250	143735152	58	0.2767
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	143740210	150822391	2695	-1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	150822419	150852862	29	1.0402
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	150852902	167483561	11552	-0.0111
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	167500598	167508390	7	-2.377
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	167509025	206507525	25716	-0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	206512343	206523503	28	0.5773
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	206523560	237521273	21806	-0.0019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	237523841	237532970	6	-0.8533
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	237535179	241114179	2824	-0.0034
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	241115363	241151317	56	-0.3556
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	1	241152179	247191011	3800	-0.0176
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	2784	73992	37	-0.3599
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	76644	165844	55	0.0462
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	166395	166411	2	-1.1982
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	168283	4183562	2897	0.0339
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	4191739	4201387	37	-0.6728
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	4201442	8088549	3320	5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	8091150	8098124	6	-0.9995
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	8101380	14226414	4347	0.0068
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	14227116	14230611	3	-1.0723
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	14234365	24460458	7250	0.0031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	24460486	24464632	14	-0.7411
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	24465231	34538784	6145	-0.0063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	34544573	34590561	47	0.4677
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	34590667	41091739	4828	-0.0104
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	41091947	41099391	23	-2.072
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	41104737	45607465	3260	7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	45612531	45612558	2	-1.3917
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	45617923	52607972	4934	0.0079
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	52607984	52635046	39	-2.5189
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	52641453	86981712	22009	-0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	86982714	86990896	2	-1.7736
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	87015364	129354548	21130	-0.002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	129354948	129356785	15	-0.8989
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	129356799	134628713	3036	-0.0017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	134628732	134628941	2	-1.6797
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	134629410	138204570	2281	-0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	138205997	138211717	2	-1.944
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	138212362	153495731	9371	0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	153504314	153505030	3	-1.4508
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	153508815	188820644	21525	-0.0019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	188821056	188828173	5	-0.9053
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	188832407	194695938	3291	-0.0056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	194696112	194697803	2	-1.6376
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	194697845	208058564	7945	-0.006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	208058871	208069844	28	0.3261
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	208069857	212889567	3033	1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	212894794	212900371	26	-0.767
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	212900403	215619756	1733	0.0119
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	215622736	215622739	2	-1.3784
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	215623150	221793857	3988	-0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	221794031	221797760	11	-0.967
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	221798041	230966859	6084	-4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	230973595	230974522	2	1.1323
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	230975887	241258252	6621	0.0124
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	241258954	241364576	32	0.3441
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	2	241376618	242738129	589	0.041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	35345	80098	37	-0.4325
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	80365	12996881	10718	-8e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	12998543	13029086	18	0.332
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	13029788	36258735	15793	-0.0032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	36258961	36272678	16	-0.4406
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	36272694	41501971	3519	-0.0079
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	41504492	41551285	28	-0.31
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	41551615	68828854	17719	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	68828949	68831448	15	1.1422
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	68831476	85557418	10404	0.0123
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	85557873	85559608	2	-1.3818
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	85561464	89469736	2252	0.0217
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	89469791	89477432	9	-0.9121
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	89487790	89487807	4	0.3848
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	89488444	89503163	42	-0.7388
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	89503178	100427896	3252	0.0034
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	100427979	100431991	23	0.359
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	100431998	131258548	18748	-0.0027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	131259366	131290966	52	0.5307
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	131291245	150445653	11908	-0.0045
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	150445666	150450811	26	-0.808
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	150453770	163606060	8062	-0.0015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	163620294	163625399	14	-0.7367
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	163626942	163995433	263	-0.0599
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	163995786	164028923	22	0.7458
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	164030203	174719597	6410	-0.0011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	174723329	174772293	23	0.5712
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	174772374	194360596	12799	-0.0057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	194360656	194365563	17	0.6023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	3	194365582	199380515	2709	0.0111
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	4	2281	9819488	5803	0.0269
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	4	9823258	9843706	32	-0.689
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	4	9844105	28559388	13409	0.0051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	4	28559449	28570093	27	-0.3355
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	4	28570392	34462895	3552	0.012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	4	34463350	34500578	36	-0.4428
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	4	34501120	61619533	15087	-0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	4	61623530	61624547	2	1.8201
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	4	61628281	68902978	4382	0.0087
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	4	68909443	68939354	4	1.4364
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	4	68942668	69027207	17	-0.1356
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	4	69043083	69171930	68	0.489
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	4	69187710	70158099	331	-0.0349
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	4	70162233	70266713	56	-0.6526
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	4	70270740	172605921	62101	-0.0049
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	4	172611459	172614019	8	1.1743
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	4	172614033	173224503	400	0.0233
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	4	173225723	173226108	12	-2.0051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	4	173232554	180330700	4374	-0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	4	180334982	180335332	2	-2.4589
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	4	180338916	189458252	6563	0.0122
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	4	189458354	189458418	3	-1.3833
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	4	189458433	191261904	1178	-0.019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	5	68532	144436	36	-0.3235
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	5	150915	738748	272	0.1571
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	5	751371	826568	29	-0.8444
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	5	832860	862806	14	-0.2482
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	5	870850	967098	39	0.3013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	5	967233	1073354	50	-5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	5	1074219	1315893	103	0.3158
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	5	1320317	11214625	8588	0.0182
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	5	11215636	11215771	3	-2.7066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	5	11220277	21412601	6591	0.0055
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	5	21413596	21413610	2	-1.8983
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	5	21421823	57357403	20162	-0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	5	57361784	57369290	32	2.4632
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	5	57374114	78143664	12274	-0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	5	78145747	78146927	3	-1.4244
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	5	78151267	103879120	14582	-0.0069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	5	103888272	103888503	4	-1.1708
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	5	103888948	112288302	5607	-0.0047
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	5	112292438	112304546	9	-0.8218
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	5	112312122	117414516	3789	-0.0053
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	5	117416321	117432239	12	-0.5973
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	5	117434704	180307129	40709	-0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	5	180311316	180350709	19	0.5073
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	5	180365831	180722926	171	0.0386
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	94661	199283	101	0.0443
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	202353	320277	95	0.3903
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	320759	29845825	21463	0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	29846023	29846979	2	-1.8305
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	29847036	31460859	842	-0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	31461308	31461520	3	-1.3561
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	31461618	54039234	14262	-0.0019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	54039339	54039814	4	1.1724
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	54043307	62981784	3099	-0.0057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	62983601	62986263	4	-0.8638
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	62989662	66450811	1947	-0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	66456203	66463848	25	-0.6519
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	66463931	74648586	5440	-2e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	74648953	74658138	10	0.9106
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	74660283	77071668	1466	-0.0234
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	77073620	77073631	2	-1.1779
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	77073646	77493251	297	-0.0337
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	77496587	77499966	11	0.7646
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	77502918	103841522	16586	-0.0079
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	103844669	103868754	46	-1.3966
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	103872163	110676293	4318	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	110676798	110677362	3	-1.2548
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	110680585	124473473	8367	-0.0031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	124477640	124512064	20	0.5223
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	124512460	135377122	7091	-0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	135383947	135384931	2	-1.4397
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	135391263	169979653	24035	0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	169980588	170389880	140	0.2227
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	170390220	170499881	58	0.0166
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	170499979	170510046	7	-0.2777
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	6	170511365	170892930	175	0.0391
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	52911	6958142	3491	0.0309
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	6968132	6975727	3	-1.9057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	6980259	54353999	35078	-0.0031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	54354003	54354011	5	-2.1143
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	54360982	62099410	2275	0.0149
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	62103428	62103843	4	-1.5357
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	62104452	69827248	3875	-1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	69835213	69839878	6	-1.0888
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	69840181	70058374	137	-0.0247
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	70061186	70064077	2	-1.9562
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	70066179	100867643	17433	-0.0018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	100868518	100868706	2	-1.6992
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	100872978	109228448	5091	-0.0077
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	109228480	109241218	12	0.8719
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	109241465	133435717	14752	-7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	133435735	133440983	25	-2.1294
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	133446174	133448649	7	-0.6761
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	133449083	141409593	5205	-0.0023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	141416112	141459483	53	0.384
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	141460959	142154515	439	0.0266
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	142156294	142159107	6	-3.7021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	142159241	142165554	20	-1.6342
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	142165614	142926974	469	-0.021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	142927368	143198992	104	0.3737
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	143203099	143504885	267	-0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	143527185	143706836	48	0.6235
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	143719492	152458453	5311	0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	152460839	152461575	2	-1.7426
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	152462083	154020828	1131	0.0259
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	154024104	154030546	4	-2.3633
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	154031763	154035092	6	-0.3618
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	154035123	156433140	1780	0.0259
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	156438241	156438921	2	-1.1974
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	156440656	158740228	1385	0.0664
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	7	158743495	158819765	73	-0.2896
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	8	21254	584973	328	0.0332
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	8	585220	585908	8	1.2343
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	8	591043	7011977	7483	0.0247
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	8	7017400	7225429	37	-0.3839
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	8	7237790	7847316	151	0.6397
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	8	7864332	8015597	45	0.1174
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	8	8027373	8109713	21	0.4565
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	8	8124554	11986960	3229	0.0147
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	8	12025135	12072406	8	1.1269
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	8	12207108	12260380	8	-0.3931
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	8	12261219	12284206	10	-1.4164
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	8	12284533	12291857	29	-0.1757
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	8	12305298	12463798	51	0.4206
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	8	12464038	12690760	111	0.0638
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	8	12693099	12696897	4	-1.5807
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	8	12697904	14553939	1854	0.0163
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	8	14554403	14554445	3	1.2872
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	8	14554767	23458253	7319	-0.0016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	8	23463685	23463756	4	-1.0006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	8	23463816	39349816	10200	-0.002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	8	39354760	39506122	58	-2.393
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	8	39507456	98403570	33673	-0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	8	98405252	98405277	2	-1.8844
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	8	98405722	138891505	27054	0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	8	138892916	138894206	4	-1.1685
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	8	138894952	146224699	4219	0.059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	8	146224745	146253307	15	-0.3039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	8	146254629	146268959	10	-0.8242
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	9	36587	582306	481	0.0246
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	9	582552	582567	2	-1.4828
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	9	582718	592903	28	0.0536
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	9	596699	596961	4	-1.87
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	9	597307	5068383	4728	-0.0072
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	9	5068409	5071766	12	-0.544
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	9	5071852	11785809	5879	-0.0103
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	9	11786032	11786276	3	-1.6432
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	9	11788140	23351805	9312	-0.0085
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	9	23353115	23362399	7	-0.7698
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	9	23363484	27226644	2807	-0.0063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	9	27238177	27238644	5	-0.9286
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	9	27238727	38909108	7914	-0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	9	38918578	38984130	6	0.7264
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	9	38986103	39128121	20	-0.3923
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	9	39130232	39130247	2	-1.679
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	9	39130315	43141333	154	0.0209
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	9	43156984	43740182	45	-0.5388
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	9	44054868	44569219	49	-0.2124
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	9	44667855	44813196	38	0.6236
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	9	44815938	138197741	47686	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	9	138198544	138259864	19	0.4673
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	9	138260456	138528513	85	0.099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	9	138528562	138555190	10	0.5778
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	9	138555205	139375463	181	0.0543
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	9	139375539	139375654	2	1.3242
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	9	139392824	140211215	413	0.0643
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	10	62759	845263	453	0.0433
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	10	847151	848022	2	-1.2947
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	10	848033	18161039	14437	0.0107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	10	18168253	18239819	8	0.7307
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	10	18263653	24415269	4343	0.001
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	10	24417680	24417688	7	-2.3338
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	10	24417924	135356694	71834	0.0036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	11	188510	273963	55	-0.0192
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	11	275920	446012	50	0.2844
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	11	446120	4924693	2374	0.0157
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	11	4925086	4932281	28	-1.509
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	11	4932833	5744656	799	-0.0351
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	11	5744668	5766037	33	0.3969
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	11	5768936	21803470	12076	-0.0049
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	11	21804082	21805328	5	-0.8837
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	11	21807233	36737050	10590	0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	11	36737737	36738710	3	-1.7954
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	11	36740278	48554998	7420	0.0055
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	11	48558010	48559252	2	-1.7035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	11	48562894	50703802	832	-0.012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	11	50707300	50707934	2	-1.7105
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	11	50725893	55116036	379	-0.0425
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	11	55116094	55217259	68	-0.4041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	11	55217364	63134404	4683	-0.0173
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	11	63135825	63139501	4	0.6129
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	11	63152960	69751496	2850	0.0263
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	11	69753014	69754235	2	-1.5435
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	11	69766655	134408483	44857	1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	11	134410725	134449982	26	-0.476
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	12	20703	11110690	7272	-0.0028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	12	11111991	11127482	9	-0.6305
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	12	11128103	11132799	3	-1.9951
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	12	11143141	11405389	139	-0.0434
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	12	11405578	11434653	24	0.4345
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	12	11434673	36273993	16300	-0.0064
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	12	36298834	36300285	2	-1.9758
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	12	36320625	44186092	4775	-0.0093
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	12	44190705	44195804	3	1.6119
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	12	44199559	90246064	28092	-0.0069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	12	90246520	90246880	2	-1.8609
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	12	90247324	131174781	28072	0.0063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	12	131175632	131412661	39	0.3426
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	12	131418536	132288262	323	0.0418
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	13	17924949	22527210	2895	-0.0107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	13	22530678	22531515	12	-0.7796
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	13	22536195	36969135	10651	-0.0015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	13	36970036	36982757	16	-2.1398
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	13	36986330	113530653	50513	0.0056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	13	113531073	113855859	69	0.258
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	13	113855890	114126499	124	-0.074
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	14	18072124	18801410	53	-0.0851
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	14	18842018	18866184	7	0.6746
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	14	18871755	18947072	7	-0.2388
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	14	18979264	19008441	2	1.4095
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	14	19038403	19270249	15	0.1083
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	14	19270957	19493212	106	0.5356
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	14	19494766	21462988	1355	-0.0233
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	14	21463199	21463385	3	-1.5052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	14	21463439	85354507	40971	-0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	14	85356065	85381926	15	-1.2806
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	14	85385888	98393765	9096	0.0065
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	14	98393936	98445061	39	0.2936
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	14	98445074	105228811	3361	0.0234
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	14	105238282	105265522	3	0.9057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	14	105265808	105598011	128	0.0846
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	14	105601409	105638145	18	0.9488
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	14	105640508	106328136	399	0.02
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	14	106331984	106356482	16	-0.6741
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	15	18276341	18841578	105	-0.1387
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	15	18846002	18846497	5	-1.5728
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	15	18846673	28310412	5023	-0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	15	28310427	28380310	22	0.4655
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	15	28383521	99790454	46592	0.0028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	15	99791921	99795971	3	-0.6057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	15	99796005	100286563	306	0.0319
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	16	777	32054387	20090	0.0132
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	16	32066353	33539331	239	0.6074
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	16	33550900	54352715	6986	0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	16	54353890	54379898	21	-2.0358
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	16	54379945	54427918	19	0.4837
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	16	54430910	68709061	8745	0.0066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	16	68709823	68755268	11	0.807
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	16	68755831	72941759	2513	0.0027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	16	72954559	73014102	9	0.7153
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	16	73022897	80636592	7244	0.0067
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	16	80640130	80653400	17	0.6857
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	16	80653698	88815036	6605	0.0488
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	17	526	8183635	4554	0.0054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	17	8188272	8188458	2	-2.2714
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	17	8190183	16593977	5953	6e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	17	16595026	16659768	10	0.4569
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	17	16663526	16682253	6	0.988
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	17	16682509	16714874	7	0.3644
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	17	16719910	18299671	914	0.0323
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	17	18299674	18405946	27	-1.4652
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	17	18409922	36676616	9502	0.0071
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	17	36676629	36677012	8	-0.9073
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	17	36681376	41750189	2647	0.0209
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	17	41750195	41913223	20	-0.5711
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	17	41926953	42003683	6	0.125
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	17	42008713	42107479	20	-0.6019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	17	42120174	78643088	21616	0.0149
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	18	1543	82133	9	-1.0444
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	18	87829	12704217	9119	-0.0055
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	18	12718127	12773898	39	0.6012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	18	12779059	49458133	22595	0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	18	49461207	49464638	5	-1.1198
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	18	49466146	61872559	8590	-0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	18	61878472	61883808	16	-0.4676
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	18	61883847	63104629	814	0.0267
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	18	63110187	63110481	5	-0.7507
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	18	63110893	65358832	1792	5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	18	65359372	65368807	9	-0.5757
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	18	65371011	76083098	7789	0.0103
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	18	76085015	76116029	17	-0.5157
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	19	41910	9134800	3414	0.0181
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	19	9135672	9139121	5	-0.9426
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	19	9145760	12553001	1659	-0.0073
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	19	12558366	12559102	2	-2.1285
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	19	12561523	17892051	2744	-0.0062
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	19	17903337	17904430	3	-1.2126
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	19	17905560	35976646	5850	-0.0084
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	19	35979958	35980380	2	-1.2771
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	19	35982439	46052012	5971	0.0017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	19	46052210	46067859	27	-0.7615
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	19	46072786	47939365	890	-0.0135
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	19	47947057	48046292	40	0.4882
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	19	48054492	63762863	8734	0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	19	63763133	63789666	14	-0.4635
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	20	9305	87173	63	-0.0843
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	20	87419	87745	3	-1.414
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	20	87801	1500503	1119	0.0194
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	20	1505190	1515454	24	-0.5171
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	20	1515653	1545946	39	0.4504
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	20	1546106	52078275	33753	0.0031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	20	52081215	52091124	32	-0.8491
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	20	52091480	52092058	6	-0.3742
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	20	52095981	62426597	7459	0.0279
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	21	9758742	22573005	6466	0.0077
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	21	22577771	22586529	9	-1.0008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	21	22588870	43792481	16166	0.008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	21	43795301	43797240	2	-2.4304
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	21	43798095	45489303	946	0.0263
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	21	45489332	45755537	131	0.2593
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	21	45755888	46853888	636	0.0405
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	21	46854773	46921385	53	-0.2302
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	22	14432528	21592981	3919	0.0513
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	22	21593242	21593257	2	-2.5603
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	22	21593274	49581321	19640	0.0231
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	X	108477	115051983	60815	-2e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	X	115052431	115064666	6	-1.9488
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	X	115070447	148602545	20497	0.0019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	X	148602589	148693232	15	0.4614
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	X	148694354	153225849	2658	0.0221
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	X	153227504	153227675	2	0.8763
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	X	153229040	153241462	30	0.3999
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	X	153241729	153241806	3	0.9827
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	X	153247372	153269645	22	0.2313
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	X	153274213	154566399	521	-0.0319
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	X	154569169	154582692	16	-0.8061
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	X	154617249	154835548	18	-0.1204
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	Y	2710438	6161425	838	-2.6626
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	Y	6167901	6356423	85	-3.9604
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	Y	6359046	14099670	2615	-3.1649
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	Y	14099736	14103917	3	-7.7452
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	Y	14104283	17572959	1838	-3.1726
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	Y	17577516	17679836	42	-3.6143
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	Y	17688729	17688934	3	-7.6439
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	Y	17691665	17807379	52	-3.5794
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	Y	17809644	18080026	142	-3.0911
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	Y	18080874	19547685	705	-3.6667
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	Y	19547873	22289621	1060	-3.1676
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	Y	22292291	22779934	112	-3.678
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	Y	22782074	22924247	71	-2.9355
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	Y	22925190	24599413	315	-3.7383
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	Y	24602438	24923103	89	-2.948
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	Y	24926921	25846090	94	-4.0996
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	Y	25854303	25938472	33	-2.5409
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	Y	25944418	26011215	22	-3.792
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	Y	26013790	26129939	36	-2.6184
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	Y	26130472	26687080	195	-3.7276
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	Y	26699115	26731407	13	-5.3366
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	Y	26731471	26861404	50	-3.5481
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_B12_895852	Y	26866725	57427647	176	-2.7414
