Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	51598	12768450	6531	0.0157
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	12775335	13256970	59	-0.5066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	13257060	16878363	2182	0.0162
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	16878565	16959879	41	0.4067
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	16961936	34864261	10352	-3e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	34875241	34886855	21	-0.592
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	34888129	72528701	23777	-0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	72528730	72575092	41	0.327
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	72577166	81661044	5800	0.0101
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	81661190	81661193	2	1.7435
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	81661255	103914747	14287	0.0073
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	103915062	104023054	26	0.3344
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	104023154	104041509	12	0.8911
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	104058403	104069745	11	0.2467
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	104104926	108531282	2878	0.0153
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	108535758	108536400	2	-3.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	108539019	110029038	726	0.0069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	110034497	110044476	18	0.7239
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	110046521	111177604	839	1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	111177743	111189749	40	-0.7179
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	111193590	112491849	1078	0.0082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	112497488	112498913	25	0.5081
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	112507479	150827165	8052	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	150827492	150852862	22	-1.069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	150852902	151241882	375	0.0067
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	151243098	151248678	2	-1.8976
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	151251236	157133197	3458	-8e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	157135125	157136383	2	1.8421
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	157141442	167483561	7719	-0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	167500598	167508390	7	-1.9318
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	167509025	191422415	15795	0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	191422902	191422955	3	2.0186
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	191422971	195079130	2495	0.0159
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	195079153	195082414	2	-3.1737
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	195083353	246776293	35776	0.0069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	246780491	246856911	33	-0.7203
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	246861087	247191011	149	-0.0158
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	2784	40814	21	-0.4713
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	41268	4183562	2970	0.009
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	4191739	4200578	35	-0.7488
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	4201042	14623507	8028	0.0088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	14623720	14627543	10	-1.0185
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	14627815	34544573	13054	0.0062
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	34552819	34590561	46	-1.8107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	34590667	35829477	878	-3e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	35831294	35841451	7	-1.5077
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	35850977	52607972	12165	0.0124
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	52607984	52635046	39	-2.2002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	52641453	65732748	8374	0.0082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	65732920	65734055	2	-2.3024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	65734146	129354548	34768	0.0066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	129354948	129356785	15	-0.6766
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	129356799	212889567	50543	0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	212894794	212900070	25	-0.8379
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	212900371	242738129	19069	0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	35345	8796804	7758	0.0261
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	8800367	8833201	28	0.451
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	8841808	37952421	19913	0.0104
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	37957112	37961932	18	-0.6958
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	37962110	52998251	8078	-0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	53003415	53014529	42	-0.4703
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	53014717	68805918	12028	0.0128
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	68807382	68831742	22	0.4242
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	68831755	81677770	8358	0.0165
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	81678782	81679997	3	-1.0873
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	81683487	84184912	1276	0.0134
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	84188123	84188856	2	-3.0992
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	84193657	84782448	302	-0.0181
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	84782483	84784925	15	-1.3525
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	84785103	158163271	41524	0.0034
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	158165229	158166246	4	-1.3205
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	158174102	164019517	3603	0.0112
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	164022703	164023184	3	1.1399
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	164028410	164106575	45	-0.3459
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	164106591	166523557	1320	0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	166524242	166564570	64	-0.922
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	166564633	194361700	17821	0.01
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	194363167	194365597	13	-1.4428
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	194369129	196895127	1491	0.0106
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	196897393	196942560	32	-0.6515
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	196946367	199380515	1184	-0.006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	2281	55677	55	-0.4536
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	55761	9061021	5194	0.0155
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	9066075	9088443	10	-0.6039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	9095185	9819488	545	0.0443
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	9823258	9843364	31	2.1548
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	9843706	10001452	177	0.0947
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	10002252	10009254	13	-0.5256
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	10009609	34463385	16812	0.0121
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	34463544	34500578	34	0.6517
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	34501120	70162241	19900	3e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	70163001	70332354	87	0.2577
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	70332468	115393105	27322	0.0035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	115393149	115401624	24	-1.42
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	115403678	152400917	21833	0.007
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	152405812	152408982	5	-1.1373
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	152412258	171504657	12207	0.0086
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	171504669	171509733	6	-1.1253
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	171510589	172613549	689	0.0162
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	172613832	172613863	3	-1.5073
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	172614019	191261904	12537	0.0182
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	5	68532	15772350	12214	0.0113
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	5	15773075	15773597	9	-0.872
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	5	15776346	110444585	54734	0.005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	5	110444759	110482855	32	0.6914
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	5	110483101	151494364	26602	0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	5	151495579	151498544	14	-0.6605
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	5	151500464	177131055	17504	0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	5	177160157	177165211	3	2.0829
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	5	177187571	180312809	1817	0.0167
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	5	180319744	180365831	17	0.7091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	5	180365870	180722926	170	-0.0117
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	94661	8867189	7219	0.0129
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	8870345	8872511	3	-1.29
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	8873967	29945051	14527	0.0069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	29945166	29958345	19	-0.429
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	29958359	31388802	670	-0.0111
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	31394255	31404430	11	1.1026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	31417903	32609277	525	-0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	32616454	32648589	12	0.8373
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	32652287	65842236	18433	0.0045
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	65842260	65872602	18	-0.7719
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	65873220	74648586	5860	0.0102
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	74648953	74660283	11	0.891
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	74660333	77071668	1467	-0.0243
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	77073620	77073646	3	1.5753
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	77073713	77485308	290	-0.0343
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	77485918	77509101	21	0.5692
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	77509111	79028431	988	0.0053
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	79028500	79089036	103	-0.5942
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	79089311	132747954	33483	0.0036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	132751050	132754119	3	-1.363
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	132754618	134307961	1133	-0.0027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	134310764	134311325	2	-1.7726
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	134313765	155954446	14547	2e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	155960811	155960867	2	-1.497
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	155963722	170892930	10599	0.0093
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	7	52911	7112368	3586	0.0148
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	7	7116526	7116832	2	-1.8056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	7	7118703	125833403	73868	0.0063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	7	125833725	125833851	4	-1.9291
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	7	125834112	158765589	20985	0.0077
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	7	158766132	158819765	54	-0.2963
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	21254	2068619	1486	0.0184
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	2068658	2068760	2	-1.8474
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	2068779	2235234	159	0.0822
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	2242045	2243571	5	-0.9873
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	2243586	2591249	340	0.0716
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	2591594	2596694	2	2.259
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	2596882	3551270	1106	0.0259
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	3551589	3552026	2	-1.2176
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	3552061	3771595	334	0.0516
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	3774468	3777514	24	-0.5479
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	3778626	12260380	7857	0.0251
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	12261219	12291857	39	-1.2019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	12305298	16303983	3592	0.0229
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	16306606	16318780	25	-0.7103
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	16318795	39366268	15935	0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	39367899	39504351	55	0.8147
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	39506122	51193325	4595	0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	51194564	51194940	8	-1.5346
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	51201131	112363642	37443	0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	112363846	112364436	6	-1.0616
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	112369457	137750801	17753	0.0078
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	137751541	137932589	176	-0.8547
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	137933062	140672684	2335	0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	140673518	140674897	6	0.8469
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	140676213	143222551	1589	0.0375
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	143223790	143232724	3	1.4399
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	143233785	146268959	1070	0.0141
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	9	36587	582306	480	0.0431
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	9	582552	582567	2	-1.5123
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	9	582718	592903	28	0.0567
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	9	596699	596893	3	-2.581
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	9	596961	11349708	10259	0.0209
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	9	11350225	11356606	4	-1.1594
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	9	11356747	44569219	20687	0.0107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	9	44667855	44777523	34	-1.1473
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	9	44780914	46280910	88	-0.008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	9	46285010	46285055	2	1.9609
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	9	46287837	140211215	48326	0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	10	62759	17929827	14880	0.013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	10	17934982	17989863	4	-1.4322
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	10	18011822	24417681	4362	0
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	10	24417682	24418060	9	-2.5925
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	10	24418914	66978023	25491	0.0065
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	10	66978036	66984436	23	-1.954
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	10	66984452	110950017	28665	0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	10	110956741	110956869	3	-1.8479
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	10	110958010	135084182	17513	0.0138
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	10	135092863	135237857	112	0.554
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	10	135237865	135356694	35	0.0532
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	188510	3303319	1277	0.0249
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	3320341	3320422	2	-1.5574
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	3320743	4926819	1201	-2e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	4926853	4932281	26	-1.4511
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	4932833	5740499	797	0.0077
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	5743981	5765914	34	-2.3796
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	5766037	6060818	235	-0.0065
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	6061143	6078670	12	-0.755
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	6079079	42918407	26565	0.0063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	42926160	42927744	6	0.8464
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	42933207	55133087	4518	0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	55133210	55191703	34	-0.3527
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	55194295	85106722	17177	0.0076
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	85111335	85148589	26	-1.0675
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	85148792	134381855	35201	0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	134386523	134449982	42	-0.3455
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	12	20703	44186092	28525	0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	12	44190705	44195804	4	-1.5854
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	12	44199559	59125631	8680	0.001
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	12	59126058	59126666	2	-1.6545
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	12	59126810	98519837	25226	0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	12	98520845	98531503	9	-1.1953
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	12	98532452	100716934	1356	0.0049
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	12	100717856	100807074	37	0.5578
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	12	100811501	130686668	20647	0.009
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	12	130698537	130699288	13	0.7371
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	12	130708284	132288262	572	0.0231
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	13	17924949	22527187	2893	0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	13	22527210	22531515	13	-0.6584
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	13	22536195	48429552	18700	9e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	13	48431716	48434505	2	-2.5332
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	13	48435706	114126499	42687	0.0142
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	14	18072124	18523326	35	0.1075
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	14	18532483	19490079	153	-0.3339
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	14	19493212	105618359	54987	0.0065
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	14	105618552	105632486	9	-2.744
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	14	105638145	105965043	151	-0.018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	14	105967660	105989153	43	-0.6391
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	14	105989694	106356482	223	0.0105
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	15	18276341	18524300	54	0.0318
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	15	18525992	20088838	366	-0.8028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	15	20224763	20834252	308	0.0413
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	15	20839790	21038898	10	-0.8317
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	15	21038987	21605880	298	-0.0187
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	15	21606530	21609892	15	-1.019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	15	21609913	21610088	3	-3.9815
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	15	21610186	22202157	368	0.0228
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	15	22214855	22265932	39	-0.4773
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	15	22265951	52552567	18839	0.002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	15	52553047	52555069	2	-1.7402
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	15	52560578	100286563	31757	0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	777	54354095	27319	0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	54355723	54356280	3	2.3356
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	54361849	60772195	3991	-0.008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	60779234	60930652	116	-0.9382
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	60932764	61989715	702	0.0325
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	61990636	61991951	2	1.447
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	61992539	79455862	12685	0.0122
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	79455875	79457687	2	-1.4279
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	79460360	79533862	90	-0.1002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	79536934	79537790	2	-2.0239
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	79537938	84943868	5297	0.0169
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	84944389	84957383	26	-0.8858
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	84957582	88633227	2227	0.0312
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	88639727	88690776	39	0.4789
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	88691222	88815036	2	-0.2187
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	17	526	18296117	11442	-0.0032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	17	18299671	18405946	28	0.5628
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	17	18409922	36675234	9499	0.0103
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	17	36676540	36683976	23	-0.4449
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	17	36684057	38522374	1059	0.0194
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	17	38522439	38523663	9	-0.6616
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	17	38523776	41564451	1477	0.008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	17	41568205	41718140	89	-0.4868
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	17	41719947	41860676	14	0.1662
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	17	41879021	41879036	2	2.3607
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	17	41901645	42107479	33	0.3404
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	17	42120174	78616063	21605	0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	17	78620706	78643088	8	0.3399
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	18	1543	49778199	31998	0.0043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	18	49778840	49779150	3	-1.882
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	18	49782366	76116029	18810	0.014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	19	41910	63789666	29351	-0.0067
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	20	9305	1500503	1185	0.0107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	20	1505190	1530092	56	-0.9873
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	20	1530207	62426597	41255	0.0065
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	21	9758742	46921385	24412	0.0065
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	22	14432528	14620382	34	-0.5869
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	22	14620484	17006910	1161	-0.018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	22	17006997	17008946	2	-1.9474
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	22	17009028	21592981	2724	0.0157
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	22	21593242	21593257	2	-1.9888
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	22	21593274	25518947	3007	0.0044
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	22	25519042	25519055	2	-2.1694
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	22	25519663	37620866	8538	-0.0072
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	22	37625201	37626850	3	-2.8707
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	22	37629060	49581321	8089	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	X	108477	65172667	34881	0.0182
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	X	65177996	65179817	2	-4.4368
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	X	65181904	131043442	35287	0.0027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	X	131044135	131044365	2	4.3022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	X	131045069	134646801	1808	0.0207
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	X	134646867	134651935	3	-2.8125
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	X	134655067	145858585	7261	0.0097
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	X	145860710	145861121	2	-4.2379
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	X	145861832	154835548	5199	0.0294
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	Y	2710438	23934190	7666	-0.9295
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	Y	23948769	23965986	16	-1.9106
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	Y	23966362	26807487	705	-0.9482
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	Y	26808258	26847504	20	-1.8586
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	Y	26847931	57427647	182	-0.9807
