Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	61735	12845863	6531	0.0157
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	12852748	13384383	59	-0.4717
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	13384473	17005776	2182	0.0162
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	17005978	17087292	41	0.4067
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	17089349	35091674	10350	-2e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	35102654	35114268	21	-0.592
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	35115542	72756113	23857	-0.0017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	72756142	72802504	41	0.327
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	72804578	81888456	5799	0.0101
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	81888602	81888605	2	1.7435
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	81888667	104113224	14279	0.0076
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	104113539	104221531	26	0.3344
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	104221631	104239986	12	0.8911
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	104256880	104268222	11	0.2467
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	104303403	108729759	2878	0.0153
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	108734235	108734877	2	-3.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	108737496	110227515	726	0.0069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	110232974	110242953	18	0.7239
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	110244998	111376081	839	1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	111376220	111388226	40	-0.7179
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	111392067	112690326	1078	0.0082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	112695965	112697390	25	0.5081
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	112705956	152560541	8049	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	152560868	152586238	22	-1.069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	152586278	152975258	375	0.0067
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	152976474	152982054	2	-1.8976
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	152984612	158866573	3457	-8e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	158868501	158869759	2	1.8421
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	158874818	169216937	7719	-0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	169233974	169241766	7	-1.9318
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	169242401	193155792	15795	0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	193156279	193156332	3	2.0186
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	193156348	196812507	2495	0.0159
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	196812530	196815791	2	-3.1737
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	196816730	248709670	35773	0.0069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	248713868	248805339	39	-0.6765
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	1	248808557	249224388	144	-0.0056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	12784	50814	21	-0.4713
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	51268	4205687	2970	0.009
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	4213864	4222703	35	-0.7488
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	4223167	14706056	8026	0.0088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	14706269	14710092	10	-1.0185
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	14710364	34691069	13054	0.0062
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	34699315	34737057	46	-1.8107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	34737163	35975973	878	-3e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	35977790	35987947	7	-1.5077
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	35997473	52754468	12164	0.0123
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	52754480	52781542	39	-2.2002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	52787949	65879244	8372	0.0083
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	65879416	65880551	2	-2.3024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	65880642	87128201	13631	0.0061
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	87129203	87137385	2	-1.7445
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	87161853	129638078	21128	0.0071
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	129638478	129640315	15	-0.6766
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	129640329	213181322	50543	0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	213186549	213191825	25	-0.8379
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	2	213192126	243089456	19069	0.0036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	60345	8821804	7758	0.026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	8825367	8858201	28	0.451
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	8866808	37977417	19912	0.0104
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	37982108	37986928	18	-0.6958
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	37987106	53023211	8079	-0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	53028375	53039489	42	-0.4703
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	53039677	68723228	12027	0.0128
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	68724692	68749052	22	0.4242
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	68749065	81595080	8355	0.0165
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	81596092	81597307	3	-1.0873
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	81600797	84102222	1276	0.0134
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	84105433	84106166	2	-3.0992
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	84110967	84699758	302	-0.0181
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	84699793	84702235	15	-1.3525
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	84702413	156680577	41521	0.0034
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	156682535	156683552	4	-1.3205
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	156691408	162540490	3605	0.0121
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	162545716	162623881	45	-0.3459
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	162623897	165040863	1319	0.006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	165041548	165081876	64	-0.922
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	165081939	192879006	17823	0.01
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	192880473	192882903	13	-1.4428
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	192886435	195409946	1491	0.0106
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	195412212	195456889	32	-0.6515
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	3	195460696	197896118	1184	-0.006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	12281	65677	55	-0.4536
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	65761	9451923	5194	0.0155
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	9456977	9479345	10	-0.6039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	9486087	10210390	545	0.0443
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	10214160	10234266	31	2.1548
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	10234608	10392354	177	0.0947
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	10393154	10400156	13	-0.5256
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	10400511	34786990	16812	0.0121
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	34787149	34824183	34	0.6517
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	34824725	70127652	19899	4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	70128412	70297765	87	0.2577
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	70297879	115173656	27326	0.0035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	115173700	115182175	24	-1.42
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	115184229	152181467	21837	0.007
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	152186362	152189532	5	-1.1373
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	152192808	171268082	12207	0.0086
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	171268094	171273158	6	-1.1253
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	171274014	172376974	689	0.0162
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	172377257	172377288	3	-1.5073
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	4	172377444	191027923	12536	0.0182
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	5	15532	15719350	12216	0.0113
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	5	15720075	15720597	9	-0.872
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	5	15723346	110416686	54733	0.005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	5	110416860	110454956	32	0.6914
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	5	110455202	128683854	12473	0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	5	128683856	128684279	2	-1.5237
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	5	128687035	151514171	14127	-0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	5	151515386	151518351	14	-0.6605
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	5	151520271	177198449	17504	0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	5	177227551	177232605	3	2.0829
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	5	177254965	180380203	1817	0.0167
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	5	180387138	180433225	17	0.7091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	5	180433264	180790320	170	-0.0117
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	149661	8922190	7220	0.0129
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	8925346	8927512	3	-1.29
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	8928968	29837072	14525	0.007
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	29837187	29850366	19	-0.429
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	29850380	31280823	670	-0.0111
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	31286276	31296451	11	1.1026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	31309924	32501299	525	-0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	32508476	32540611	12	0.8373
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	32544309	65785515	18435	0.0045
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	65785539	65815881	18	-0.7719
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	65816499	74591858	5859	0.01
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	74592225	74603555	11	0.891
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	74603605	77014948	1467	-0.0243
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	77016900	77016926	3	1.5753
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	77016993	77428589	290	-0.0343
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	77429199	77452382	21	0.5692
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	77452392	78971712	988	0.005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	78971781	79032317	103	-0.5942
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	79032592	132706261	33487	0.0036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	132709357	132712426	3	-1.363
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	132712925	134266268	1133	-0.0027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	134269071	134269632	2	-1.7726
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	134272072	155912754	14549	3e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	155919119	155919175	2	-1.497
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	6	155922030	171051005	10599	0.0093
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	7	43355	7145843	3584	0.015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	7	7150001	7150307	2	-1.8056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	7	7152178	126046167	73873	0.0064
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	7	126046489	126046615	4	-1.9291
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	7	126046876	159072828	20985	0.0076
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	7	159073371	159127004	54	-0.2963
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	31254	2081212	1487	0.0187
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	2081251	2081353	2	-1.8474
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	2081372	2247827	159	0.0822
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	2254638	2256164	5	-0.9873
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	2256179	2603842	340	0.0716
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	2604187	2609287	2	2.259
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	2609475	3563862	1106	0.0259
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	3564181	3564618	2	-1.2176
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	3564653	3784187	334	0.0516
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	3787060	3790106	24	-0.5479
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	3791218	12216009	7855	0.0251
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	12216848	12247486	39	-1.2019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	12260927	16259612	3593	0.0227
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	16262235	16274409	25	-0.7103
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	16274424	39247111	15936	0.0031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	39248742	39385194	55	0.8147
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	39386965	51030772	4595	0.0017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	51032011	51032387	8	-1.5346
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	51038578	112294466	37447	0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	112294670	112295260	6	-1.0616
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	112300281	137681619	17755	0.0078
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	137682359	137863407	176	-0.8547
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	8	137863880	146298155	5003	0.0183
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	9	46587	592306	482	0.0418
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	9	592552	592567	2	-1.5123
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	9	592718	602903	28	0.0567
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	9	606699	606893	3	-2.581
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	9	606961	11359708	10259	0.0209
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	9	11360225	11366606	4	-1.1594
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	9	11366747	44629223	20693	0.0108
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	9	44727859	44837527	34	-1.1473
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	9	44840918	46390914	88	-0.008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	9	46395014	46395059	2	1.9609
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	9	46397841	141091394	48333	0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	10	72759	17889821	14880	0.013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	10	17894976	17949857	4	-1.4322
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	10	17971816	24377675	4361	0
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	10	24377676	24378054	9	-2.5925
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	10	24378908	67308017	25491	0.0065
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	10	67308030	67314430	23	-1.954
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	10	67314446	110960027	28663	0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	10	110966751	110966879	3	-1.8479
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	10	110968020	135234192	17513	0.0138
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	10	135242873	135387867	112	0.554
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	10	135387875	135506704	35	0.0532
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	198510	3346743	1276	0.025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	3363765	3363846	2	-1.5574
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	3364167	4970243	1201	-2e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	4970277	4975705	26	-1.4511
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	4976257	5783923	797	0.0077
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	5787405	5809338	34	-2.3796
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	5809461	6104242	235	-0.0065
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	6104567	6122094	12	-0.755
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	6122503	42961831	26562	0.0062
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	42969584	42971168	6	0.8464
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	42976631	55376511	4518	0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	55376634	55435127	34	-0.3527
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	55437719	85429074	17177	0.0076
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	85433687	85470941	26	-1.0675
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	85471144	134876645	35194	0.0032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	11	134881313	134944770	42	-0.3455
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	12	150442	45899825	28520	0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	12	45904438	45909537	4	-1.5854
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	12	45913292	60839364	8679	9e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	12	60839791	60840399	2	-1.6545
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	12	60840543	99995706	25226	0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	12	99996714	100007372	9	-1.1953
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	12	100008321	102192803	1355	0.0053
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	12	102193725	102282943	37	0.5578
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	12	102287370	132120715	20646	0.009
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	12	132132584	132133335	13	0.7371
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	12	132142331	133778189	572	0.0231
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	13	19026949	23629187	2893	0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	13	23629210	23633515	13	-0.6584
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	13	23638195	25039590	1148	0.0244
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	13	25039595	25039598	2	1.472
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	13	25039678	49531551	17548	-8e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	13	49533715	49536504	2	-2.5332
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	13	49537705	115108397	42685	0.0142
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	14	19002124	19453326	35	0.1075
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	14	19462483	20420239	153	-0.3339
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	14	20423372	106547314	54984	0.0066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	14	106547507	106561441	9	-2.744
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	14	106567100	106893998	151	-0.018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	14	106896615	106918108	43	-0.6391
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	14	106918649	107285437	223	0.0105
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	15	20016328	20264286	54	0.0318
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	15	20265978	22587474	366	-0.799
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	15	22673399	23282811	308	0.0413
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	15	23288349	23487457	10	-0.8317
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	15	23487546	24054787	298	-0.0187
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	15	24055437	24058799	15	-1.019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	15	24058820	24058995	3	-3.9815
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	15	24059093	24651064	368	0.0228
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	15	24663762	24714839	39	-0.4773
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	15	24714858	54765275	18839	0.0019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	15	54765755	54767777	2	-1.7402
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	15	54773286	102469040	31754	0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	60777	55796594	27317	0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	55798222	55798779	3	2.3356
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	55804348	62214694	3991	-0.008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	62221733	62373151	116	-0.9382
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	62375263	63432214	702	0.0325
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	63433135	63434450	2	1.447
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	63435038	80898361	12603	0.0132
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	80898374	80900186	2	-1.4279
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	80902859	80976361	90	-0.1002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	80979433	80980289	2	-2.0239
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	80980437	86386367	5297	0.0169
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	86386888	86399882	26	-0.8858
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	86400081	90105726	2228	0.0312
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	90112226	90163275	39	0.4789
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	16	90163721	90287535	4	-0.3115
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	17	526	18355392	11443	-0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	17	18358946	18465221	28	0.5628
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	17	18469197	39421708	9497	0.0102
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	17	39423014	39430450	23	-0.4449
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	17	39430531	41268848	1059	0.0194
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	17	41268913	41270137	9	-0.6616
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	17	41270250	44208674	1477	0.008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	17	44212428	44362363	89	-0.4868
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	17	44364170	44505241	14	0.1662
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	17	44523711	44523726	2	2.3607
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	17	44546329	44752300	33	0.3404
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	17	44764994	81022774	21606	0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	17	81027417	81049726	8	0.3399
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	18	11543	51524201	31996	0.0043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	18	51524842	51525152	3	-1.882
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	18	51528368	78015057	18809	0.0141
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	19	90910	59097854	29350	-0.0067
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	20	61305	1552503	1185	0.0107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	20	1557190	1582092	56	-0.9873
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	20	1582207	62956153	41258	0.0065
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	21	10736871	48096957	24411	0.0065
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	22	16052528	16240382	34	-0.5869
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	22	16240484	18626910	1161	-0.018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	22	18626997	18628946	2	-1.9474
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	22	18629028	23262981	2724	0.0157
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	22	23263242	23263257	2	-1.9888
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	22	23263274	27188947	3007	0.0044
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	22	27189042	27189055	2	-2.1694
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	22	27189663	39290920	8537	-0.007
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	22	39295255	39296904	3	-2.8707
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	22	39299114	51181236	8073	0.0068
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	22	51183853	51234455	17	-0.5026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	X	168477	65255942	34888	0.0182
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	X	65261271	65263092	2	-4.4368
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	X	65265179	131215761	35270	0.0036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	X	131216454	131216684	2	4.3022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	X	131217388	134819135	1811	0.0208
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	X	134819201	134824269	3	-2.8125
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	X	134827401	146050893	7258	0.0097
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	X	146053018	146053429	2	-4.2379
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	X	146054140	155182354	5198	0.0293
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	Y	2650438	25524802	7710	-0.9296
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	Y	25539381	25556598	16	-1.9106
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	Y	25556974	28398099	705	-0.9482
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	Y	28398870	28438116	20	-1.8586
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C01_895702	Y	28438543	59018259	182	-0.9807
