Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	61735	229075	20	0.034
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	229158	235938	7	0.7108
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	356443	12839576	6500	0.0054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	12841928	13384264	60	0.4165
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	13384383	16869363	2140	0
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	16871278	17262247	166	0.2177
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	17276241	58482341	24134	0.0075
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	58482943	58483220	4	-1.2187
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	58484277	83227438	16790	-0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	83227697	83227702	2	-1.4381
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	83228072	85591670	1628	0.002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	85594437	85598627	6	-1.0548
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	85600326	96155176	6872	2e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	96155716	96156066	2	-1.2244
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	96156216	104221531	4844	1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	104221631	104239689	11	0.4949
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	104239986	106013376	931	0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	106019205	106022375	17	0.4876
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	106024055	110224384	2653	-0.0077
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	110224427	110242953	32	0.3944
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	110244998	112690326	1954	-3e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	112695965	112697012	18	0.5062
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	112697174	117019614	2816	0.005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	117021188	117021237	2	-1.4456
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	117021290	145228364	2626	0.0064
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	145229178	145280322	14	0.4163
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	145287545	148870937	913	0.0314
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	148893345	149041518	19	-0.7251
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	149041722	149205446	93	-2.4822
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	149205493	149436842	65	-0.7056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	149521840	149692388	20	-0.0596
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	149701234	149739073	11	-0.5831
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	149748542	152555527	1465	0.0126
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	152555706	152586238	31	-1.4113
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	152586278	152751237	167	0.0256
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	152754630	152767923	37	-0.2576
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	152767947	161508875	5284	0.0156
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	161517939	161618251	21	-0.9969
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	161618549	161619058	9	-0.2468
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	161621885	161638513	16	-0.8245
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	161648237	169216937	6014	0.0032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	169233974	169241766	7	-2.5294
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	169242401	189286113	13211	0.0067
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	189286175	189288939	3	-0.9031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	189289857	189648157	239	-0.0522
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	189648483	189648527	2	-1.7287
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	189652047	196714873	4738	-0.0148
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	196727850	196815791	96	-0.5931
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	196816730	243120996	32166	0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	243123937	243129352	3	-1.2558
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	243134707	248737447	3604	0.0085
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	248749194	248797213	33	-0.8569
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	1	248805339	249224388	145	0.092
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	2	12784	1786522	1159	0.0119
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	2	1788006	1788623	2	-1.6491
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	2	1789404	52754468	36046	-0.0018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	2	52754480	52781542	39	-2.7158
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	2	52787949	86058182	21397	3e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	2	86061393	86061513	2	-1.1422
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	2	86062216	87761615	754	0.0152
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	2	87763297	87765018	2	-1.4135
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	2	87766225	110462496	9633	0.0031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	2	110467473	110477250	2	1.3132
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	2	110501512	111547987	163	-0.0086
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	2	111549155	111553515	2	-1.7911
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	2	111554181	130793856	12069	0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	2	130793883	130874876	17	-0.4353
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	2	130893997	141435073	6250	-0.0084
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	2	141439713	141439812	2	-1.4425
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	2	141439838	146862085	3329	-0.018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	2	146864404	146866934	24	0.7458
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	2	146877806	189118923	25737	8e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	2	189119928	189126930	4	-2.3331
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	2	189129058	194987693	3289	-0.0154
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	2	194987867	194989558	2	-1.7813
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	2	194989600	203192669	4729	0.0016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	2	203194078	203199228	5	-1.0431
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	2	203202958	221289656	11471	3e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	2	221290227	221290339	2	-1.409
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	2	221291271	243089456	13890	0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	3	60345	106424	40	0.2649
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	3	107776	23979303	17884	-0.0088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	3	23981429	23982328	2	-2.9845
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	3	23982330	89387101	42604	-0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	3	89394592	89419381	51	-0.8388
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	3	89419921	143285765	30450	0.0057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	3	143285800	143285974	4	1.165
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	3	143286801	162513149	11904	-0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	3	162513459	162628799	72	-0.577
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	3	162628912	175080611	7659	-0.0069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	3	175080747	175081226	4	-1.06
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	3	175081325	190256086	9684	0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	3	190260037	190260915	4	-1.5296
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	3	190261281	192877962	1838	-0.0086
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	3	192878045	192880473	6	0.9679
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	3	192880587	195285664	1497	0.0097
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	3	195285898	195446922	29	-0.9302
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	3	195455508	195656614	95	-0.0238
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	3	195661424	195718765	11	-0.5113
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	3	195725304	197896118	1086	0.0223
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	12281	85168	77	0.318
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	85800	5165055	2434	0.0092
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	5165075	5179702	11	-0.6258
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	5181189	9456977	2728	0.0017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	9461230	9479345	9	-0.8418
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	9486087	10210390	545	0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	10214160	10231249	28	2.0996
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	10231498	10235268	8	0.4395
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	10236142	10390715	171	-0.017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	10392354	10400668	16	-0.7015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	10402718	34779054	16800	-0.0066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	34786500	34824725	38	0.43
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	34829872	35064427	149	0.0174
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	35065810	35079029	11	-0.6668
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	35079586	35572716	341	-0.0127
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	35575772	35579749	2	-1.2214
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	35583699	35604709	13	0.0157
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	35606225	35606984	3	0.9148
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	35614946	37402609	1245	-0.0064
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	37404987	37409176	10	-0.9811
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	37414483	40053077	1709	0.0031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	40053090	40146234	51	0.2201
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	40147368	64705364	13068	0.0011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	64705515	64708258	15	0.6313
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	64716431	69284591	2863	-0.0108
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	69288138	69288142	3	-1.9033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	69294799	69372003	16	-0.1682
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	69374941	69485979	64	-1.9042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	69489335	116164445	28365	-0.0015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	116164460	116180370	32	-0.6167
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	4	116180555	191027923	46645	-0.0027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	5	15532	685748	307	0.038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	5	698371	819815	48	0.3457
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	5	819932	896815	28	-0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	5	905701	908540	3	-1.0353
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	5	913391	8702114	6581	0.0016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	5	8702240	8747142	47	-0.9247
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	5	8749731	10798704	1763	-0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	5	10800002	10800150	2	-1.275
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	5	10800210	15719222	3432	-5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	5	15719350	15720597	10	-1.0246
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	5	15723346	57326027	23667	-0.0043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	5	57326163	57333533	31	-0.7221
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	5	57338357	68846303	7305	0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	5	68867294	70254906	18	-0.796
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	5	70306659	97045121	15613	-0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	5	97048466	97099320	43	-1.0567
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	5	97099684	103851221	3882	-0.0064
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	5	103860373	103860604	4	-1.0278
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	5	103861049	112828229	6045	-0.0036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	5	112839667	112842197	2	1.2832
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	5	112842992	117386617	3356	-0.005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	5	117388422	117404340	12	-0.7285
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	5	117406805	150202205	20408	0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	5	150205500	150218604	8	-0.8475
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	5	150223387	180790320	20486	0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	149661	294837	124	0.0312
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	302306	381149	78	0.6317
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	382559	23057637	17541	0.0043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	23060991	23064254	4	-1.2082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	23067645	26704816	2533	-0.0011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	26704918	26773509	36	0.359
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	26783667	29850380	1456	0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	29871636	29901576	17	-0.7737
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	29908469	32454523	1175	0.0318
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	32456683	32482969	8	2.1141
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	32491304	32690027	102	0.3023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	32690797	32690830	3	2.8299
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	32692227	65336942	18054	0.0016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	65347544	65348992	2	-2.838
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	65350776	69470944	2860	-0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	69471113	69475322	4	-0.9687
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	69475930	74592225	3299	-0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	74592457	74601410	9	-2.8388
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	74603555	77436532	1766	0.0111
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	77439868	77452382	15	-3.4965
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	77452392	77452757	6	-1.5664
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	77461073	78962889	977	0.0032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	78969065	79032317	107	-0.7277
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	79032592	95343147	10484	-0.0019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	95346421	95680019	214	-1.1974
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	95834652	97039404	703	0.0034
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	97039421	97046451	4	-0.7407
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	97046652	101932126	3010	0.0065
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	101939038	101939276	4	-0.7859
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	101939489	103728225	1063	-0.0098
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	103730493	103759825	49	-0.2362
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	103760004	134266268	19086	0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	134269071	134269632	2	1.5563
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	6	134272072	171051005	25145	0.001
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	43355	38387443	27553	-0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	38391365	38396476	4	-1.6265
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	38398047	42751965	2969	-0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	42752725	42753138	2	-1.1713
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	42755893	54386505	8038	0.0094
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	54386509	54386517	5	-1.9722
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	54393488	70420438	6298	0.0143
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	70423250	70426141	2	-2.6972
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	70428243	72154577	1119	0.0139
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	72165369	72265773	36	0.2753
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	72268294	76143893	1036	0.0164
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	76153348	76161422	6	0.6808
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	76179714	85210710	6060	-0.0117
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	85210816	85218739	3	-1.2177
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	85219103	97395462	7601	-0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	97395465	97395471	4	1.0184
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	97395506	97609419	117	0.0738
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	97611341	97612048	3	-2.3829
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	97613771	102238133	1944	0.0183
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	102238170	102288215	3	1.0469
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	102316719	109441244	4601	5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	109441629	109453910	10	0.8679
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	109453982	133778652	14753	-0.0027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	133785177	133799197	38	0.3749
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	133806244	141770060	5201	0.0094
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	141770129	141799117	42	0.2789
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	141799160	142474939	446	-0.0313
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	142476719	142485985	26	-2.0528
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	142486045	143709699	694	-0.0073
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	143710096	143711169	8	0.467
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	143711241	143873952	136	-0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	143896252	143938313	12	0.6978
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	143946878	143961955	8	-0.4845
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	143970310	144066947	24	0.5369
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	144074929	146094676	1252	0.016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	146098510	146099236	3	-1.3899
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	146102203	150272366	2591	0.0103
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	150278375	150278514	2	-1.4329
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	150280272	153147638	1733	0.0177
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	153147645	153147712	2	-2.6455
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	153147715	154389895	866	-0.0089
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	154393171	154399613	4	-2.2368
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	154400830	159046821	3167	0.008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	7	159046855	159127004	77	0.2491
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	8	31254	6157311	6910	-0.0075
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	8	6158191	6180162	37	0.2976
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	8	6180464	6840297	788	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	8	6858815	6878853	6	0.7241
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	8	6879803	7024567	78	-0.0218
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	8	7029990	7043340	5	-1.0137
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	8	7154067	7633289	118	0.1
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	8	7633422	7635591	2	-1.3537
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	8	7635638	9492060	1457	0.0125
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	8	9492229	9502336	15	-0.6179
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	8	9502463	12234400	1908	-0.0088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	8	12239835	12343613	60	0.3541
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	8	12353730	24974476	10455	0.0019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	8	24974522	24984333	25	0.8184
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	8	24991104	39230659	9036	-7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	8	39235603	39386965	58	-2.4596
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	8	39388299	51030746	4592	0.0104
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	8	51030772	51033423	10	-0.5017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	8	51038578	68547669	10945	0.0078
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	8	68548132	68548400	6	-0.762
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	8	68548491	72212365	2358	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	8	72215311	72220321	12	-0.561
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	8	72222321	81989021	6080	0.0043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	8	81991698	81993779	5	-1.1975
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	8	81995592	115632043	19874	0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	8	115634487	115641731	35	-0.6788
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	8	115650697	146275791	21058	0.0015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	8	146279621	146298155	13	0.4197
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	9	46587	6704419	6393	0.0101
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	9	6704475	6708357	4	-0.7322
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	9	6712314	22492889	13474	-0.008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	9	22501913	22502699	2	1.3513
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	9	22509340	24503816	1384	-0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	9	24504125	24517682	19	-1.2063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	9	24519684	27236644	1992	-0.0168
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	9	27248177	27248644	5	-1.1859
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	9	27248727	31870065	3454	-0.0231
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	9	31871221	31871335	3	-1.0173
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	9	31872721	41952516	4621	0.0118
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	9	41972506	41978375	2	1.3562
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	9	41985187	44424451	112	0.0856
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	9	44446136	44873200	41	0.5597
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	9	44875942	46388197	80	0.0922
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	9	46388520	46390711	2	-1.1875
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	9	46390759	74678542	3156	-0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	9	74679454	74683057	6	-1.2077
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	9	74683084	79150338	3121	-0.0016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	9	79150662	79160463	13	-1.2421
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	9	79163508	141091394	42036	0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	10	72759	18083562	14886	-0.0016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	10	18106443	18136748	4	-1.134
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	10	18150761	20840874	2144	0.0082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	10	20850112	20853503	5	-1.5739
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	10	20853534	24377674	2199	0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	10	24377675	24378054	10	0.8626
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	10	24378908	46070052	12257	0.0085
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	10	46072872	46083171	9	-0.623
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	10	46083500	46253045	47	0.0788
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	10	46256781	47055711	94	0.524
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	10	47058792	47059821	22	-0.0077
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	10	47062311	48179770	278	0.5637
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	10	48301657	51830360	1757	0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	10	51840984	51891920	4	-2.1278
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	10	51903768	67305085	11010	-0.0104
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	10	67305111	67314446	32	0.312
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	10	67322795	78252851	6804	-0.0019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	10	78257061	78257610	2	2.1751
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	10	78261267	92462715	10170	0.0064
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	10	92462824	92463291	3	-1.1714
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	10	92471580	109704168	10815	0.0079
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	10	109705684	109711955	3	-1.0669
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	10	109712116	135229141	18371	-0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	10	135229719	135229868	2	-2.1989
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	10	135232654	135506704	151	0.0207
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	11	198510	1653568	493	-0.0071
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	11	1654565	1654761	2	-1.5746
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	11	1657127	5788092	2810	-0.001
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	11	5789601	5809461	32	0.3282
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	11	5812360	37133420	22923	0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	11	37133473	37134048	5	0.5867
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	11	37134068	55376498	8392	-0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	11	55376511	55439332	37	-0.3691
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	11	55439990	88303294	19232	0.0015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	11	88309306	88309676	3	-1.9809
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	11	88310297	134944770	33203	0.0063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	12	150442	865970	418	0.0499
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	12	869109	874029	18	-0.7513
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	12	875354	9460534	5684	0.0143
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	12	9461228	9467809	2	1.0673
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	12	9472365	9630556	81	0.0435
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	12	9633870	9734970	27	0.8432
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	12	9735686	11511578	1186	-0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	12	11512492	11543406	30	0.4886
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	12	11552192	33294660	15422	0.0069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	12	33301406	33307374	27	-0.7233
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	12	33308360	45899825	5620	0.0027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	12	45904438	45909537	4	-1.7448
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	12	45913292	119983825	47444	0.0034
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	12	119988887	119990761	16	-0.8916
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	12	119994041	131727385	8104	-2e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	12	131731944	131825755	86	-1.1086
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	12	131833210	132143374	320	0.0063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	12	132143770	132144196	5	-1.0979
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	12	132154193	133778189	556	0.0331
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	13	19026949	20410556	698	0.0276
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	13	20418741	20446859	12	0.554
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	13	20449891	49531551	20892	0.0023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	13	49533715	49536504	2	-3.3772
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	13	49537705	64255393	8359	-0.0092
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	13	64262208	64373228	68	-0.9796
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	13	64377960	107382635	28939	-0.0084
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	13	107384238	107384710	2	-1.2379
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	13	107385235	115045259	5276	-0.0054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	13	115045362	115108397	30	0.2641
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	14	19002124	19689317	48	0.1079
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	14	19693231	20423372	142	0.5643
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	14	20424926	21175274	571	0.0034
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	14	21176089	21176092	2	-1.1618
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	14	21178398	41607634	13073	-0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	14	41608358	41657249	15	-0.6608
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	14	41657349	45174100	2123	-0.0108
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	14	45182148	45223713	32	-1.1642
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	14	45226859	106715330	39244	7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	14	106715489	106746958	16	-0.5369
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	14	106747099	106770857	18	-0.0568
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	14	106776973	106783044	3	-0.3941
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	14	106796025	106802053	7	-1.8642
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	14	106815943	106820744	3	-0.4978
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	14	106821736	106879831	31	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	14	106881352	106918108	50	-0.7211
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	14	106918649	107285437	223	-0.0338
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	15	20016328	20291313	59	0.0176
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	15	20392821	20581564	46	-0.847
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	15	20585988	20590042	14	-2.5277
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	15	20590160	22363231	215	-0.8292
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	15	22373070	22381411	6	-3.328
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	15	22383201	22587474	82	-0.8128
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	15	22673399	24674751	1007	0.022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	15	24674887	24718173	38	-0.6815
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	15	24718596	30450369	3641	0.0188
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	15	30491387	30775994	91	-0.237
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	15	30779591	32504264	1075	0.0183
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	15	32509892	32512220	7	-1.1279
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	15	32531316	102469040	45768	0.0016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	16	60777	16377662	11786	0.0114
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	16	16513091	16513638	3	1.1844
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	16	16529591	19944363	1738	0.0245
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	16	19945650	19967362	29	-0.8188
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	16	19970254	28202939	5286	0.0144
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	16	28208865	28209725	2	-1.1643
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	16	28214773	32510824	1297	0.0419
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	16	32511767	32554239	5	-0.6066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	16	32554255	33304629	97	0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	16	33336217	33432160	14	0.5398
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	16	33436610	55796594	7066	-0.0107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	16	55798222	55798762	2	2.3912
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	16	55798779	55822444	16	0.3544
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	16	55829557	66050918	6767	-0.0089
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	16	66053230	66053401	2	-1.2221
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	16	66054207	81004307	10744	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	16	81005379	81005402	2	-1.3041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	16	81006758	90287535	7570	0.0053
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	17	526	1424948	668	0.0549
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	17	1429418	1429630	2	-2.0015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	17	1429687	15475087	9349	0.0206
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	17	15479936	15484871	4	-0.8918
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	17	15490100	16654301	488	0.0127
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	17	16657331	16741528	15	-0.5326
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	17	16741784	18358946	921	-0.0114
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	17	18358949	18453437	24	0.7142
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	17	18459272	39421708	9499	0.0123
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	17	39423014	39430531	24	-0.5344
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	17	39432724	43655090	2165	0.016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	17	43656380	43659426	6	-0.758
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	17	43664693	44212428	373	0.0158
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	17	44213204	44364170	89	-0.2994
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	17	44394412	44752300	48	0.7459
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	17	44764994	55687489	7014	-3e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	17	55688333	55688993	2	1.2802
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	17	55691993	81049726	14603	0.0047
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	18	11543	41976886	25221	-0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	18	41976954	41978625	5	-0.8846
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	18	41982671	51204135	6543	-6e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	18	51207209	51210640	5	-1.2778
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	18	51212148	77916015	18980	-0.0121
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	18	77916247	78015057	56	0.2819
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	19	90910	5506659	1600	0.0137
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	19	5510239	5510700	4	-1.15
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	19	5513059	21814919	8080	0.0236
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	19	21815640	21819869	2	-1.5907
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	19	21820111	35849493	7141	0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	19	35855353	35861669	19	-0.5458
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	19	35861779	53319159	8918	0.0239
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	19	53327390	53353669	47	0.5688
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	19	53357185	58940514	3490	0.0288
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	19	58943408	58944375	2	-3.8942
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	19	58946056	59097854	52	0.1832
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	20	61305	1560999	1206	0.0395
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	20	1561580	1593893	41	-1.4032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	20	1597946	14792812	9935	-0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	20	14792834	14792838	2	-3.1714
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	20	14793415	29420553	8877	-0.0019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	20	29428523	29505893	21	-1.6955
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	20	29527893	29569895	17	-0.3343
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	20	29573833	38034463	4359	0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	20	38038991	38042046	3	-1.0165
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	20	38046128	54138368	11811	0.0017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	20	54138428	54138442	2	-1.4138
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	20	54138706	55535038	1162	0.0071
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	20	55535065	55535082	2	-1.0728
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	20	55535138	59570792	3272	-0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	20	59573296	59576867	3	-1.0178
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	20	59576902	62956153	1785	-0.0174
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	21	10736871	37927798	16963	-0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	21	37927972	37935888	6	-0.818
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	21	37935985	44968053	5677	0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	21	44970873	44972812	2	-2.4384
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	21	44973667	48096957	1766	0.0154
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	22	16052528	44489394	18506	0.0169
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	22	44489896	44490686	3	-1.1124
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	22	44493727	51234455	5053	0.0094
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	X	168477	2873845	224	0.147
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	X	2874806	2885723	6	-0.5049
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	X	2885822	7559491	3580	-0.0189
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	X	7559994	7561058	2	-1.7695
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	X	7561105	38583819	20290	-0.0219
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	X	38586159	38586188	2	-1.4861
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	X	38591633	62443272	9720	0.0198
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	X	62443462	62517002	25	0.5455
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	X	62517469	76349873	6299	0.0362
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	X	76353650	76523952	18	-0.6896
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	X	76545159	90970506	7582	0.0209
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	X	90970618	90971771	7	-0.764
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	X	90971889	115133681	13046	5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	X	115137955	115150638	7	0.9583
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	X	115156419	127624833	7461	0.0044
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	X	127627552	127714032	38	-1.1932
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	X	127720499	155182354	16283	-1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	Y	2650438	6101425	871	-2.6847
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	Y	6107901	6315579	92	-4.1896
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	Y	6320976	7399842	461	-3.1105
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	Y	7400746	9759564	1203	-3.4502
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	Y	9774614	15024621	697	-3.1104
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	Y	15026424	15030817	5	-6.4296
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	Y	15032288	15590276	249	-3.221
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	Y	15590342	15594523	3	-7.7452
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	Y	15594889	19063565	1842	-3.3051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	Y	19068122	21088297	944	-3.7391
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	Y	21088485	23981777	1087	-3.3573
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	Y	23982659	26190025	472	-3.7398
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	Y	26193050	26517533	90	-2.968
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	Y	26526212	27444915	94	-4.2625
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	Y	27448378	27720551	90	-2.9077
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	Y	27721084	28277692	195	-3.8867
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	Y	28289727	28322019	13	-5.6238
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	Y	28322083	28452016	50	-3.636
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C03_895844	Y	28457337	59018259	176	-2.8883
