Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	51598	615333	34	-0.4837
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	696962	72541086	42932	3e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	72541504	72583736	46	-1.5813
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	72584492	105814899	21037	0.0107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	105820728	105823898	17	-2.2467
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	105825578	110023250	2654	0.0106
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	110025907	110041678	31	0.3955
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	110041701	111177743	841	0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	111178891	111189749	39	-0.7247
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	111193590	112491849	1077	0.0099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	112497488	112498486	16	0.5587
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	112498520	146929353	6371	-1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	146929387	147220620	22	-0.3793
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	147291426	147540169	137	-0.7505
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	147541278	147845346	36	-0.4708
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	147884075	150822330	1488	-0.0229
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	150822391	150852862	30	1.107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	150852902	167483561	11556	0.0067
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	167500598	167508390	7	0.9526
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	167509025	177590361	6619	0.0111
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	177597151	177605829	5	-0.9473
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	177605885	195006595	11587	0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	195006834	195024732	26	0.384
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	195024743	199740270	3122	0.0068
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	199741023	199741167	2	-1.6028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	199741843	208137685	5754	-0.0035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	208148236	208153175	4	1.3111
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	208160117	230758916	15269	0.0023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	230760387	230761367	3	-1.2598
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	230762269	243703033	9637	-0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	243703662	243716274	12	-0.9953
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	243717052	247191011	2209	0.0306
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	2784	3706436	2571	0.0224
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	3710421	3714413	5	-1.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	3719946	34516482	21529	0.0061
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	34516862	34590561	55	0.4827
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	34590667	52608065	13053	0.0193
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	52608232	52608385	3	-2.1961
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	52612257	97210614	24075	0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	97213724	97240000	15	0.3918
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	97240533	97391786	24	-0.0149
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	97429511	97528142	11	-0.7759
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	97528621	104333192	4142	0.006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	104334292	104334354	2	-1.6176
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	104337256	106241154	1438	-3e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	106246527	106253840	14	-0.6534
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	106254302	110603665	2210	0.0083
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	110844411	110854188	2	1.5572
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	111105101	129354548	11241	0.0094
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	129354948	129356767	14	-0.6403
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	129356785	180121616	31014	0.0063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	180126456	180130382	30	-0.6778
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	180133888	197405980	10058	0.0201
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	197409206	197412293	2	-1.5876
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	197416957	208063200	6379	-0.0049
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	208063423	208067581	16	-0.6259
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	208067721	212870413	3012	7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	212870545	212900070	54	0.2663
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	212900371	228664780	10332	0.0032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	228665252	228670370	2	-1.6356
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	228670900	229465250	488	0.0183
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	229467723	229468157	8	-0.7327
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	229468327	232109712	1589	0.0095
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	232109747	232164420	39	-0.334
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	232166101	242738129	6611	0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	35345	199602	157	0.1074
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	205022	210030	6	-0.8712
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	210605	823802	499	0.0852
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	832458	834524	4	-1.6733
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	836153	12644332	9865	0.0279
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	12644732	12731894	75	-0.2991
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	12731946	26401195	9339	0.0193
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	26409128	26409905	4	-0.9934
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	26414347	81678782	36293	0.0066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	81678794	81679997	2	-1.4507
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	81683487	86399518	2542	0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	86404435	86404790	2	-1.5437
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	86405503	90452988	2178	0.0109
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	90461384	90533171	7	-0.6592
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	90537852	100427148	2863	0.0106
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	100427166	100432111	37	-0.4466
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	100433654	131245549	18743	0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	131246388	131288926	52	0.3519
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	131289614	163974567	20264	0.0092
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	163974803	164117009	105	0.4168
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	164127661	196767187	20678	0.0093
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	196868323	196932593	28	0.7648
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	196941179	196941719	8	0.1102
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	196942560	196960434	11	0.8019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	196964365	199380515	1174	-0.0327
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	2281	9061021	5245	2e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	9066075	9088443	10	-0.7438
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	9095185	9832514	547	0.0047
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	9832726	9843364	29	-0.9576
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	9843706	11454922	1459	0.0135
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	11455572	11456126	2	-1.5756
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	11457233	25897916	10284	0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	25901083	25903874	3	-1.2667
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	25904272	39053888	8461	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	39054697	39059314	2	-1.4287
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	39060004	48962605	5812	0.0073
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	48985949	48986112	2	-2.4173
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	48991977	52380750	24	-0.3634
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	52380801	64388380	7603	0.0028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	64390176	64390818	7	1.05
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	64390853	65107607	373	-0.0128
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	65114604	65158341	32	0.3483
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	65158377	69096538	2492	-0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	69102618	69617078	62	-0.2803
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	69626201	70424305	480	0.1165
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	70424450	70425368	2	1.5143
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	70426477	115393149	27239	0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	115394772	115403678	24	0.6166
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	115403701	157187630	24959	0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	157187733	157187748	2	-1.6682
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	157187923	191261904	22318	0.0124
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	68532	16881233	12990	0.0123
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	16884106	16884299	2	-1.5371
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	16887568	57357403	22903	0.0079
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	57361784	57369290	32	2.4408
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	57374114	68865103	7302	0.0089
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	68882059	69153891	6	-1.1683
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	69269183	113181538	25813	0.0093
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	113185921	113198344	7	-0.8581
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	113204804	117416321	3143	0.0185
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	117416509	117416984	10	-0.6743
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	117432239	155415307	24070	0.0073
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	155427828	155427831	2	-1.4957
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	155427835	174367659	13370	-0.0023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	174368627	174371834	8	-1.1241
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	174375839	177100569	1443	-0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	177130561	177192936	8	-0.7783
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	177198586	180307129	1811	-0.0067
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	180311316	180365870	21	0.4582
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	180375006	180722926	169	-0.0425
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	6	94661	29945051	21747	0.0074
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	6	29945166	29982787	24	0.8651
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	6	29984938	31394284	668	-0.0247
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	6	31394510	31404430	9	-1.3016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	6	31417903	34045784	1384	-5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	6	34045977	34050683	8	-0.886
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	6	34052564	65393663	17290	0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	6	65404265	65405713	2	-2.7012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	6	65407497	77493251	7940	0.0091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	6	77496587	77509392	19	0.6355
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	6	77509408	79019608	980	-0.0049
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	6	79025784	79091904	112	-0.6165
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	6	79095953	170892930	59766	0.0083
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	52911	54347867	38573	0.0131
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	54353999	54354011	6	-1.9128
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	54360982	70058374	6298	-0.0239
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	70061186	70064077	2	-3.0068
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	70066179	109221021	22504	0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	109221034	109241146	36	-1.1451
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	109241218	127943822	11442	0.0155
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	127945979	128071073	30	-0.3476
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	128095225	133435717	3278	-0.0036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	133435735	133446174	26	-2.076
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	133446205	133449737	11	-0.5837
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	133456784	134864208	1043	-0.0097
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	134864600	134868333	6	-0.889
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	134869187	141409163	4151	-0.0051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	141409593	141445586	47	-0.535
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	141445629	142532332	713	0.0313
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	142538076	142601843	33	-0.8718
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	142607892	158819765	10306	0.0091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	21254	102796	3	-0.4401
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	103380	7242458	7857	0.0433
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	7242520	8124554	213	-0.2561
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	8129435	8183421	60	0.9073
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	8185409	12483262	3285	0.0111
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	12487426	12595139	23	-0.5555
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	12595506	16306606	3508	0.011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	16306618	16323066	28	-0.6382
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	16326958	18309434	1774	0.0098
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	18310437	18315465	4	-2.0456
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	18315667	25028104	5090	7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	25030360	25040250	27	0.812
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	25047021	39349816	9037	-0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	39354760	39506122	59	-2.4499
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	39507456	40891153	1074	0.0061
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	40897009	40897628	2	-2.57
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	40902837	109597000	39436	0.0053
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	109599962	109603634	3	-1.4333
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	109603804	112360528	1531	0.0107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	112360670	112364436	10	0.7634
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	112369457	146268959	22932	0.0034
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	9	36587	10393105	9982	0.0292
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	9	10394138	10394986	2	2.0295
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	9	10397943	44569219	21478	0.0153
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	9	44667855	44795733	36	0.5562
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	9	44806024	89712414	14625	0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	9	89743971	89744039	2	-1.5615
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	9	89747777	114906767	17779	0.0079
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	9	114907244	114907345	2	-1.4813
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	9	114921421	133248600	12350	-8e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	9	133250747	133255525	5	-0.9405
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	9	133261836	140191348	3640	-0.001
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	9	140191761	140211215	6	0.5188
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	10	62759	17899449	14875	0.0086
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	10	17920974	17989863	6	-1.3481
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	10	18011822	18161039	8	0.0423
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	10	18168253	18239819	8	0.9557
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	10	18263653	66514322	29517	0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	10	66522713	66580493	31	0.6005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	10	66588861	66978977	301	0.027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	10	66979007	66984436	15	-0.518
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	10	66984452	135356694	46328	0.0044
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	188510	2486738	850	-0.0233
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	2486855	2489867	2	-1.7745
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	2490010	4924226	1626	-0.0028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	4924693	4932910	32	0.7472
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	4932947	5744668	797	0.0265
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	5746177	5765914	31	0.4927
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	5766037	8190452	1807	0.0169
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	8192070	8194521	2	-1.4161
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	8195076	48666319	28328	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	48667000	48886708	60	-0.2611
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	48886904	55118007	1120	0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	55119916	55194295	46	-0.314
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	55195908	85983465	17823	5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	85983523	85983702	3	-2.8199
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	85992822	101099594	10839	0.0104
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	101103070	101103174	4	1.4869
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	101103422	134449982	23773	0.0073
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	20703	736231	418	-0.0377
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	739370	746507	20	-0.7953
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	746549	9525137	5765	0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	9529176	9619559	23	-1.8951
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	9626236	11106639	1041	0.011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	11108116	11132799	14	0.8437
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	11143141	33185911	15591	0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	33185927	33195133	21	0.422
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	33195850	33278024	53	-0.0053
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	33280096	33286685	5	-2.467
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	33290320	46993570	7283	0.019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	46995644	47011682	15	-0.6638
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	47016303	69156340	13476	0.0073
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	69158125	69164294	10	-0.747
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	69165652	82363033	8236	0.0055
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	82365812	82371077	9	-1.0216
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	82378573	132288262	33077	0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	13	17924949	36969135	13563	0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	13	36970036	36976352	9	-1.7911
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	13	36976419	36982757	7	-3.0485
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	13	36986330	114126499	50711	0.0071
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	14	18072124	18492533	29	-0.287
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	14	18502799	18539520	9	0.3547
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	14	18611714	18690051	8	-0.6833
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	14	18730853	18767885	5	-1.7048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	14	18776758	19495349	140	-0.3184
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	14	19495700	105609107	54980	0.0091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	14	105612798	105632486	12	-2.3626
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	14	105638145	105854089	103	0.0403
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	14	105867070	105896961	12	-0.6194
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	14	105897157	106356482	302	0.0757
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	15	18276341	19074991	154	-0.0144
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	15	19080081	19555435	151	0.3475
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	15	19566875	22036921	1051	-0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	15	22044109	22054359	4	-1.7936
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	15	22054753	59471497	23864	0.0096
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	15	59475461	59485273	17	-0.8472
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	15	59487676	100286563	26818	0.0099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	16	777	21319904	14459	-0.0011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	16	21422575	21501135	23	-0.9967
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	16	21503814	21649686	94	-0.0559
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	16	21650043	21727915	17	-0.5116
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	16	21729603	22349521	252	-0.0649
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	16	22465433	22618243	70	-1.0924
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	16	22620480	33350391	5340	-0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	16	33353981	33539331	68	0.3141
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	16	33550900	88815036	32179	6e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	526	3475731	1875	-0.0416
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	3478239	3499148	16	-0.4228
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	3500275	4256292	444	-0.0119
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	4257388	4328497	43	-0.3124
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	4332252	18296117	9068	0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	18299671	18394162	25	0.6023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	18399997	29627028	5663	0.0064
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	29627834	29639912	5	-0.6655
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	29640428	36683683	3853	0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	36683699	36683976	3	-1.6835
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	36684057	53042488	9694	-6e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	53043332	53043992	2	-1.8753
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	53046992	53567099	351	0.019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	53567513	53569093	4	-1.2602
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	53572397	78643088	14245	-0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	18	1543	61854884	40352	0.0084
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	18	61855325	61878834	17	0.5603
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	18	61878869	61884005	13	0.078
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	18	61884020	61884576	4	-0.5964
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	18	61884652	76116029	10419	0.0303
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	19	41910	63789666	29345	-0.0213
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	20	9305	1508802	1203	0.0062
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	20	1508922	1546106	46	0.3923
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	20	1546336	62426597	41249	0.0065
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	21	9758742	18977958	3711	0.0093
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	21	18979549	19002805	27	0.648
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	21	19003746	46921385	20674	0.0107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	22	14432528	14482524	11	-0.6632
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	22	14488143	17053357	1205	-0.0277
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	22	17112919	17150527	5	-1.3895
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	22	17161546	22667949	3400	-0.0552
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	22	22674422	22700430	10	-1.3116
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	22	22701070	22715546	4	-4.153
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	22	22716631	22726814	6	-1.099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	22	22731529	49570861	18916	-0.0053
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	22	49578524	49581321	2	-0.9135
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	X	108477	154835548	84515	0.0121
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	Y	2710438	20721953	6793	-0.9243
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	Y	20725977	20898745	8	-2.0154
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	Y	20924356	23516243	849	-0.9437
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	Y	23569054	23585126	3	-2.4356
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	Y	23601019	57427647	936	-0.9593
