Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	61735	625470	34	-0.4837
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	707099	72768498	43010	2e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	72768916	72811148	46	-1.5813
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	72811904	106013376	21028	0.0106
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	106019205	106022375	17	-2.2467
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	106024055	110221727	2654	0.0106
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	110224384	110240155	31	0.3955
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	110240178	111376220	841	0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	111377368	111388226	39	-0.7247
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	111392067	112690326	1077	0.0099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	112695965	112696963	16	0.5587
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	112696997	148662729	6367	-1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	148662763	148953996	22	-0.3793
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	149024802	149273545	137	-0.7505
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	149274654	149578722	36	-0.4708
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	149617451	152555706	1489	-0.0231
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	152555767	152586238	30	1.107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	152586278	169216937	11555	0.0067
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	169233974	169241766	7	0.9526
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	169242401	179323738	6619	0.011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	179330528	179339206	5	-0.9473
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	179339262	196739972	11587	0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	196740211	196758109	26	0.384
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	196758120	201473647	3122	0.0068
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	201474400	201474544	2	-1.6028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	201475220	210071062	5755	-0.0035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	210081613	210086552	4	1.3111
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	210093494	232692293	15267	0.0023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	232693764	232694744	3	-1.2598
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	232695646	245636410	9636	-0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	245637039	245649651	12	-0.9953
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	1	245650429	249224388	2209	0.0306
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	12784	3728561	2571	0.0224
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	3732546	3736538	5	-1.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	3742071	34662978	21527	0.0061
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	34663358	34737057	55	0.4827
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	34737163	52754561	13052	0.0192
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	52754728	52754881	3	-2.1961
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	52758753	97846887	24067	0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	97849997	97876273	15	0.3918
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	97876806	98025647	24	-0.0149
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	98063372	98161710	11	-0.7759
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	98162189	104966760	4142	0.006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	104967860	104967922	2	-1.6176
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	104970824	106874722	1438	-3e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	106880095	106887408	14	-0.6534
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	106887870	110462496	2109	0.0107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	110467473	110477250	2	1.5572
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	110501512	129638078	11341	0.0088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	129638478	129640297	14	-0.6403
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	129640315	180413371	31011	0.0063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	180418211	180422137	30	-0.6778
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	180425643	197697735	10060	0.0201
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	197700961	197704048	2	-1.5876
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	197708712	208354955	6380	-0.0049
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	208355178	208359336	16	-0.6259
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	208359476	213162168	3012	7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	213162300	213191825	54	0.2663
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	213192126	228956536	10331	0.0032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	228957008	228962126	2	-1.6356
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	228962656	229757006	489	0.019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	229759479	229759913	8	-0.7327
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	229760083	232401468	1588	0.0097
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	232401503	232456176	39	-0.334
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	2	232457857	243089456	6612	0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	60345	224602	157	0.1074
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	230022	235030	6	-0.8712
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	235605	848802	498	0.0843
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	857458	859524	4	-1.6733
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	861153	12669332	9865	0.0278
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	12669732	12756894	75	-0.2991
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	12756946	26426191	9339	0.0194
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	26434124	26434901	4	-0.9934
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	26439343	81596092	36290	0.0066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	81596104	81597307	2	-1.4507
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	81600797	86316828	2541	0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	86321745	86322100	2	-1.5437
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	86322813	90370298	2177	0.0108
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	90378694	90450481	7	-0.6592
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	90455162	98944458	2862	0.0106
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	98944476	98949421	37	-0.4466
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	98950964	129762859	18743	0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	129763698	129806236	52	0.3519
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	129806924	162491873	20263	0.0092
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	162492109	162634315	105	0.4168
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	162644967	195285898	20679	0.0093
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	195383142	195446922	28	0.7648
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	195455508	195456048	8	0.1102
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	195456889	195474763	11	0.8019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	3	195478694	197896118	1174	-0.0327
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	12281	9451923	5245	2e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	9456977	9479345	10	-0.7438
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	9486087	10223416	547	0.0047
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	10223628	10234266	29	-0.9576
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	10234608	11845824	1460	0.0134
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	11846474	11847028	2	-1.5756
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	11848135	26288818	10283	0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	26291985	26294776	3	-1.2667
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	26295174	39377493	8461	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	39378302	39382919	2	-1.4287
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	39383609	49267848	5811	0.0072
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	49291192	49291355	2	-2.4173
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	49297220	52685993	24	-0.3634
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	52686044	64705785	7601	0.0027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	64707581	64708223	7	1.05
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	64708258	65425012	373	-0.0128
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	65432009	65475746	32	0.3483
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	65475782	69420023	2499	-0.0031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	69420039	69435424	8	-0.7125
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	69435612	69480893	27	-0.2272
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	69480923	69484049	4	-0.5871
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	69484087	70389716	498	0.1099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	70389861	70390779	2	1.5143
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	70391888	115173700	27243	0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	115175323	115184229	24	0.6166
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	115184252	156968180	24963	0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	156968283	156968298	2	-1.6682
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	4	156968473	191027923	22317	0.0124
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	15532	16828233	12992	0.0123
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	16831106	16831299	2	-1.5371
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	16834568	57321646	22899	0.0079
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	57326027	57333533	32	2.4408
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	57338357	68829347	7302	0.0089
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	68846303	69118135	6	-1.1683
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	69233427	113153639	25815	0.0093
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	113158022	113170445	7	-0.8581
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	113176905	117388422	3143	0.0186
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	117388610	117389085	10	-0.6743
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	117404340	155482729	24069	0.0073
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	155495250	155495253	2	-1.4957
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	155495257	174435053	13372	-0.0023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	174436021	174439228	8	-1.1241
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	174443233	177167963	1443	-0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	177197955	177260330	8	-0.7783
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	177265980	180374523	1811	-0.0067
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	180378710	180433264	21	0.4582
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	5	180442400	180790320	169	-0.0425
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	6	149661	29837072	21746	0.0075
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	6	29837187	29874808	24	0.8651
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	6	29876959	31286305	668	-0.0247
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	6	31286531	31296451	9	-1.3016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	6	31309924	33937806	1384	-5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	6	33937999	33942705	8	-0.886
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	6	33944586	65336942	17292	0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	6	65347544	65348992	2	-2.7012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	6	65350776	77436532	7939	0.0091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	6	77439868	77452673	19	0.6355
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	6	77452689	78962889	980	-0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	6	78969065	79035185	112	-0.6165
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	6	79039234	171051005	59772	0.0083
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	43355	54380373	38569	0.0131
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	54386505	54386517	6	-1.9128
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	54393488	70420438	6299	-0.0237
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	70423250	70426141	2	-3.0068
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	70428243	109433785	22508	0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	109433798	109453910	36	-1.1451
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	109453982	128156586	11444	0.0155
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	128158743	128283837	30	-0.3476
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	128307989	133785177	3278	-0.0036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	133785195	133795634	26	-2.076
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	133795665	133799197	11	-0.5837
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	133806244	135213668	1043	-0.0097
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	135214060	135217793	6	-0.889
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	135218647	141762694	4151	-0.0051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	141763124	141799117	47	-0.535
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	141799160	142822210	711	0.0305
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	142827954	142891721	33	-0.8718
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	7	142897770	159127004	10307	0.0091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	31254	112796	3	-0.4401
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	113380	7255048	7858	0.0433
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	7255110	8087144	213	-0.2561
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	8092025	8146011	60	0.9073
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	8147999	12438891	3284	0.0112
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	12443055	12550768	23	-0.5555
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	12551135	16262235	3508	0.011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	16262247	16278695	28	-0.6382
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	16282587	18265154	1774	0.0098
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	18266157	18271185	4	-2.0456
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	18271387	24972187	5090	7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	24974443	24984333	27	0.812
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	24991104	39230659	9038	-0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	39235603	39386965	59	-2.4499
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	39388299	40771996	1074	0.0061
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	40777852	40778471	2	-2.57
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	40783680	109527824	39439	0.0054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	109530786	109534458	3	-1.4333
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	109534628	112291352	1532	0.0105
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	112291494	112295260	10	0.7634
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	8	112300281	146298155	22934	0.0034
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	9	46587	10403105	9984	0.0292
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	9	10404138	10404986	2	2.0295
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	9	10407943	21963430	9535	0.0148
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	9	21976870	21980470	4	-0.9412
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	9	21986218	44629223	11945	0.0162
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	9	44727859	44855737	36	0.5562
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	9	44866028	90522594	14627	0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	9	90554151	90554219	2	-1.5615
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	9	90557957	115866946	17783	0.0079
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	9	115867423	115867524	2	-1.4813
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	9	115881600	134258779	12351	-8e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	9	134260926	134265704	5	-0.9405
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	9	134272015	141071527	3640	-0.001
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	9	141071940	141091394	6	0.5188
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	10	72759	17859443	14875	0.0086
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	10	17880968	17949857	6	-1.3481
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	10	17971816	18121033	8	0.0423
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	10	18128247	18199813	8	0.9557
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	10	18223647	66844316	29516	0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	10	66852707	66910487	31	0.6005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	10	66918855	67308971	301	0.027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	10	67309001	67314430	15	-0.518
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	10	67314446	135506704	46326	0.0044
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	198510	2530162	849	-0.0233
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	2530279	2533291	2	-1.7745
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	2533434	4967650	1626	-0.0028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	4968117	4976334	32	0.7472
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	4976371	5788092	797	0.0265
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	5789601	5809338	31	0.4927
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	5809461	8233876	1807	0.0169
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	8235494	8237945	2	-1.4161
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	8238500	48709743	28325	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	48710424	48930132	60	-0.2611
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	48930328	55361431	1120	0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	55363340	55437719	46	-0.314
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	55439332	86305817	17823	5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	86305875	86306054	3	-2.8199
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	86315174	101594384	10836	0.0104
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	101597860	101597964	4	1.4869
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	11	101598212	134944770	23769	0.0073
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	150442	865970	418	-0.0377
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	869109	876246	20	-0.7953
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	876288	9633870	5765	0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	9637909	9713674	21	-1.9684
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	9714954	11215372	1043	0.0088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	11216849	11241532	14	0.8437
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	11251874	33294644	15588	0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	33294660	33303866	21	0.422
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	33304583	33386757	53	-0.0053
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	33388829	33395418	5	-2.467
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	33399053	48707303	7282	0.019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	48709377	48725415	15	-0.6638
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	48730036	70870073	13475	0.0073
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	70871858	70878027	10	-0.747
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	70879385	83838902	8236	0.0055
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	83841681	83846946	9	-1.0216
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	12	83854442	133778189	33075	0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	13	19026949	38071135	13561	0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	13	38072036	38078352	9	-1.7911
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	13	38078419	38084757	7	-3.0485
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	13	38088330	115108397	50709	0.0072
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	14	19002124	19422533	29	-0.287
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	14	19432799	19469520	9	0.3547
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	14	19541714	19620051	8	-0.6833
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	14	19660853	19697885	5	-1.7048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	14	19706758	20425509	140	-0.3184
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	14	20425860	106538062	54977	0.0091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	14	106541753	106561441	12	-2.3626
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	14	106567100	106783044	103	0.0403
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	14	106796025	106825916	12	-0.6194
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	14	106826112	107285437	302	0.0757
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	15	20016328	20814977	154	-0.0144
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	15	20820067	22042753	152	0.3545
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	15	22263557	24485828	1050	-0.0034
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	15	24493016	24503266	4	-1.7936
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	15	24503660	61684205	23862	0.0096
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	15	61688169	61697981	17	-0.8472
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	15	61700384	102469040	26817	0.0099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	16	60777	21412403	14458	-0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	16	21515074	21593634	23	-0.9967
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	16	21596313	21742185	94	-0.0559
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	16	21742542	21820414	17	-0.5116
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	16	21822102	22442020	252	-0.0649
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	16	22557932	22710742	70	-1.0924
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	16	22712979	33442890	5339	-0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	16	33446480	33631830	68	0.3141
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	16	33643399	90287535	32100	7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	526	3528982	1875	-0.0416
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	3531490	3552399	16	-0.4228
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	3553526	4309543	444	-0.0119
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	4310639	4381748	43	-0.3124
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	4385503	18355392	9069	0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	18358946	18453437	25	0.6023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	18459272	32602915	5663	0.0064
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	32603721	32615799	5	-0.6655
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	32616315	39430157	3851	0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	39430173	39430450	3	-1.6835
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	39430531	55687489	9696	-6e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	55688333	55688993	2	-1.8753
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	55691993	56212100	351	0.019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	56212514	56214094	4	-1.2602
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	17	56217398	81049726	14244	-0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	18	11543	63703904	40349	0.0084
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	18	63704345	63727854	17	0.5603
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	18	63727889	63733025	13	0.078
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	18	63733040	63733596	4	-0.5964
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	18	63733672	78015057	10419	0.0303
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	19	90910	59097854	29344	-0.0213
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	20	61305	1560802	1203	0.0062
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	20	1560922	1598106	46	0.3923
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	20	1598336	62956153	41252	0.0065
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	21	10736871	20056087	3711	0.0093
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	21	20057678	20080934	27	0.648
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	21	20081875	48096957	20673	0.0107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	22	16052528	16102524	11	-0.6632
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	22	16108143	18673357	1205	-0.0277
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	22	18732919	18770527	5	-1.3895
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	22	18781546	24337949	3400	-0.0552
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	22	24344422	24370430	10	-1.3116
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	22	24371070	24385546	4	-4.153
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	22	24386631	24396814	6	-1.099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	22	24401529	51223995	18916	-0.0053
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	22	51231658	51234455	2	-0.9135
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	X	168477	155182354	84503	0.0125
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	Y	2650438	22262565	6838	-0.9244
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	Y	22266589	22489357	8	-2.0154
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	Y	22514968	25106855	849	-0.9437
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	Y	25159666	25175738	3	-2.4356
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C08_895824	Y	25191631	59018259	936	-0.9593
