Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	51598	59765247	34194	6e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	59777192	59830867	34	-0.9882
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	59831294	72541504	8744	0.0043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	72541524	72583736	45	-1.3849
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	72584492	105814899	21034	3e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	105820728	105823898	17	0.7167
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	105825578	110034497	2670	-0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	110034560	110034850	5	1.1274
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	110035094	112491849	1967	1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	112497488	112497831	5	0.8418
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	112497996	112498095	5	0.0514
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	112498138	112498913	15	0.6605
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	112507479	147204529	6380	-0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	147214334	147689083	167	-0.5556
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	147689241	150822330	1499	0.0109
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	150822391	150852862	30	2.2421
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	150852902	150853218	4	0.8693
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	150857118	151026302	171	-0.0349
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	151028547	151034962	34	0.6613
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	151034983	194976383	29549	0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	194977690	195037318	50	0.3673
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	195037903	208137685	8871	0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	208148236	208150607	3	-2.2023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	208153175	241119680	23282	0.0011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	241121325	241271012	84	-0.2614
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	241271027	241369789	25	0.0142
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	241373547	241374289	2	1.448
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	241375814	246776239	3560	0.0031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	246776293	246780491	2	1.4261
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	1	246780614	247191011	181	0.0174
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	2	2784	35829477	25039	-0.0011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	2	35831294	35841451	7	1.1222
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	2	35850977	86981712	34215	0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	2	86982714	86990896	2	-1.7297
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	2	87015364	97221654	2038	-0.0043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	2	97229064	97240900	15	-0.8092
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	2	97250052	167871976	42214	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	2	167881178	167889686	10	-0.9475
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	2	167896174	176967088	5816	-0.0032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	2	176975422	176980779	2	1.5555
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	2	176983384	180121607	2069	-0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	2	180121616	180130133	28	-0.783
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	2	180130151	208063200	16441	0.0056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	2	208063423	208067581	16	-0.7884
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	2	208067721	242656041	22076	0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	2	242656067	242692808	38	0.4678
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	2	242694139	242738129	18	-0.0696
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	3	35345	68828949	47867	0
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	3	68828974	68830103	13	-1.5532
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	3	68831448	84933837	10056	-0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	3	84934073	84955494	11	-1.0181
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	3	84955672	100420474	5892	-0.0032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	3	100427148	100435082	42	-0.4648
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	3	100435133	150445666	30709	0.0011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	3	150446085	150450811	25	-0.8207
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	3	150453770	163999007	8346	0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	3	164001275	164109266	63	-0.5725
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	3	164109297	177366443	8163	-9e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	3	177370753	177397173	33	-0.8545
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	3	177398915	181954400	2823	-0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	3	181955519	181959989	3	-1.4633
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	3	181960197	194360596	8167	-8e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	3	194360656	194365597	19	-1.2351
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	3	194369129	196897393	1492	-0.0096
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	3	196903444	196928253	18	-0.7955
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	3	196932268	199380515	1197	-0.0031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	2281	58911	60	-0.3536
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	59520	9819488	5743	-0.0111
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	9823258	9840596	29	-0.6502
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	9843312	34462895	17003	0.001
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	34463350	34501120	37	-0.4706
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	34506267	48901196	8981	0.006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	48911291	49352980	27	-0.5006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	49353369	53705767	752	-0.0126
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	53708482	53709332	2	-1.7228
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	53712367	63352531	6267	-7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	63352664	63354257	7	-2.0101
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	63362225	64376535	556	-0.0085
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	64380064	64400638	32	0.3516
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	64404811	68927029	2851	0.0054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	68937665	69168435	85	0.4764
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	69168574	70424305	499	0.0304
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	70424450	70425368	2	-2.4713
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	70426477	110985083	24387	4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	110985385	110988703	2	-1.7883
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	110989138	115393149	2856	0.0096
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	115394772	115403771	28	0.6214
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	115403829	116385256	603	-0.0248
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	116385317	116394703	13	-0.6782
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	116394757	138311689	12639	0.006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	138311870	138312193	6	-1.2525
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	138312207	162093450	14771	0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	162099468	162104050	20	-0.8114
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	162104358	173224503	7083	0.0031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	173225723	173226108	12	-1.843
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	173232554	173659097	232	0.0049
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	173661522	173661604	2	2.2991
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	173661802	173665218	5	0.8016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	173677707	189458252	10705	0.0104
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	189458354	189458369	2	1.9639
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	4	189458418	191261904	1179	-0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	5	68532	738748	308	-0.0406
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	5	751371	832860	30	0.6194
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	5	832881	12838262	9879	0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	5	12843869	12873076	13	0.7998
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	5	12877411	21485033	5541	-6e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	5	21486957	21488195	5	-1.236
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	5	21488253	34192239	7941	0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	5	34192465	34192722	2	1.8432
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	5	34192815	35900347	1108	-0.0106
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	5	35900501	35901975	2	-1.6912
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	5	35902937	46282412	5975	6e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	5	46282417	46313969	11	-2.2185
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	5	46349104	49588455	37	-0.3632
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	5	49591895	53909593	2694	0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	5	53909751	53909933	2	-2.3646
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	5	53911326	57357403	2349	0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	5	57361784	57369290	32	1.4424
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	5	57374114	98786208	23904	5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	5	98786346	98786931	2	-2.5685
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	5	98795643	103879120	2957	5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	5	103888272	103888503	4	-1.2423
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	5	103888948	117414516	9404	0.0049
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	5	117416321	117416984	11	-0.6936
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	5	117432239	177131055	38900	0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	5	177160157	177165211	3	2.3961
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	5	177187571	180722926	2004	-0.0237
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	6	94661	199267	100	-0.0807
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	6	199283	326149	99	-0.9872
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	6	327559	29945051	21543	4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	6	29945166	29982621	22	0.7812
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	6	29982688	31385665	667	-0.0226
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	6	31388802	31404430	12	-1.0356
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	6	31417903	32539270	503	-0.0361
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	6	32539530	32681749	38	1.4598
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	6	32681992	32798005	77	0.2883
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	6	32798775	32798808	3	2.9413
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	6	32798923	36555265	2147	0.0035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	6	36557048	36562362	2	-2.9289
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	6	36562783	54039110	11551	2e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	6	54039189	54039814	6	-1.529
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	6	54043307	74648953	10519	-0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	6	74649185	74658138	9	-2.1183
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	6	74660283	77071668	1468	-0.0075
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	6	77073620	77080308	10	0.6819
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	6	77080517	77496767	291	0.0182
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	6	77496813	77509476	19	0.4558
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	6	77517792	95247444	11468	0.0019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	6	95249827	95250446	2	1.9291
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	6	95253367	103841522	5107	-5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	6	103844669	103868754	46	-1.065
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	6	103872163	110501599	4228	0.0054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	6	110502884	110519930	18	-1.1152
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	6	110522121	170892930	39985	0.0027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	7	52911	6418006	3293	-0.0066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	7	6422392	6428728	2	-2.1254
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	7	6429155	54347867	35276	-0.0017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	7	54353999	54354011	6	-1.8498
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	7	54360982	57954446	2074	0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	7	57954873	61889916	147	-0.3008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	7	61933205	65368514	1358	-0.0015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	7	65369495	65372027	2	1.7225
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	7	65373181	68248796	1646	0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	7	68248934	68249920	3	-1.3278
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	7	68249958	70058374	1067	0.0136
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	7	70061186	70064077	2	-2.3826
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	7	70066179	133435717	37292	-0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	7	133435735	133446381	29	0.3812
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	7	133448593	142154515	5700	-3e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	7	142156294	142165614	27	0.7566
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	7	142165684	143010522	497	0.0187
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	7	143017850	143018007	3	-1.4059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	7	143028975	143056970	11	-0.0084
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	7	143057564	143154141	45	-0.2955
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	7	143155139	152778571	5910	0.0051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	7	152778578	152778645	2	-2.4844
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	7	152778648	156085929	2480	0.0032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	7	156086820	156086940	2	-3.0957
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	7	156087669	158819765	1632	-0.0069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	8	21254	2068619	1486	-0.0099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	8	2068658	2068779	3	-1.2651
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	8	2068814	2689341	630	0.0027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	8	2690940	2691306	7	-0.8266
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	8	2694578	3761343	1308	-0.0047
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	8	3764272	3777514	26	-0.5733
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	8	3778626	6813673	4259	-0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	8	6813700	6863552	19	-0.8916
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	8	6865598	7158507	90	-0.054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	8	7174042	7174056	2	3.0506
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	8	7181231	7225429	25	-0.5022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	8	7237790	16306606	7093	-0.0081
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	8	16306618	16319032	27	-0.7726
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	8	16323066	18309434	1775	-0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	8	18310437	18315465	4	-1.7388
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	8	18315667	39370644	14158	0.0015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	8	39375218	39498824	48	-0.3235
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	8	39503281	43723643	2559	0.017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	8	43741049	43782832	13	-0.8753
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	8	43783352	146268959	62413	0.002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	9	36587	23353115	20451	-0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	9	23353933	23363484	7	0.9832
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	9	23368488	69231762	11385	-0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	9	69231763	69232330	9	0.4924
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	9	69247488	69267842	17	-0.7243
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	9	70130415	93441971	16940	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	9	93442027	93443366	17	-0.8104
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	9	93443531	140211215	31086	0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	10	62759	1432709	827	0.0097
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	10	1433080	1433096	2	-1.9534
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	10	1433161	24415269	18413	9e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	10	24417680	24418060	11	-2.5006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	10	24418914	48665901	13002	-0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	10	48702225	48957609	10	-0.7656
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	10	48962469	135356694	58830	0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	11	188510	48659137	33470	-4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	11	48659265	48849438	56	-0.358
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	11	48849766	49664951	348	0.0123
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	11	49667437	49714247	19	-0.6886
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	11	49714343	49715563	5	0.5021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	11	49716131	49717264	6	-0.9642
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	11	49722737	50428747	326	-0.0203
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	11	50429472	51124745	70	-0.4571
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	11	51130817	54695664	145	-0.0981
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	11	54696918	54738787	7	-1.2523
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	11	54766051	55130764	206	-0.0518
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	11	55130779	55198894	45	0.5072
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	11	55200787	134449982	52447	1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	12	20703	739610	423	-0.0268
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	12	741231	744290	12	-0.7735
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	12	745615	2106150	831	0.0159
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	12	2116123	2128181	41	-0.5827
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	12	2128284	9525137	4896	-0.0028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	12	9529176	9619559	23	1.0482
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	12	9626236	11106639	1041	-0.0141
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	12	11108116	11132799	13	-1.0299
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	12	11143141	33403184	15750	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	12	33405313	33420618	14	-1.0122
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	12	33422705	36273993	696	-0.0263
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	12	36298834	36473016	47	-0.4451
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	12	36493309	132288262	61273	0.0011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	13	17924949	51957217	23479	0.0031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	13	51969153	52003786	10	-1.0137
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	13	52015880	114126499	40805	0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	14	18072124	40680246	13838	0.0028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	14	40680440	40727099	14	-0.5201
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	14	40739852	73070876	20494	0.0086
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	14	73076460	73099668	10	0.7767
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	14	73100484	100654755	18753	0.008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	14	100654958	100655229	2	-1.8537
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	14	100659059	105150692	1919	0.0035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	14	105153634	105170380	4	0.8433
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	14	105174078	105618359	146	0.0493
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	14	105618552	105626966	7	1.3049
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	14	105631782	106356482	419	0.0436
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	15	18276341	18529787	57	-0.0186
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	15	18544080	18841578	48	0.3219
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	15	18846002	18846956	11	1.2061
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	15	18846971	19120453	49	0.532
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	15	19122480	19503764	132	0.1902
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	15	19523446	20224763	126	0.5176
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	15	20232440	24806557	2835	0.0142
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	15	24807067	24810446	4	1.137
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	15	24811092	31542373	3810	0.0114
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	15	31545132	31545159	2	-1.8518
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	15	31545438	39984138	5651	0.0035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	15	39985651	39986759	2	-1.6401
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	15	39992243	51982281	7128	0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	15	51987642	51989791	3	-2.9253
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	15	51991520	100286563	32201	0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	16	777	32054387	20092	1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	16	32066353	32214721	22	-0.3587
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	16	32246606	32496410	50	-0.8569
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	16	32516775	32783298	50	-0.4096
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	16	32785830	33208395	28	-0.0144
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	16	33212130	33820543	127	-0.5295
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	16	33829361	76929109	21481	9e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	16	76929941	76942266	17	0.8654
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	16	76942502	88815036	10639	8e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	17	526	36675234	20974	1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	17	36676540	36683976	23	2.1849
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	17	36684057	53781788	10175	0.007
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	17	53781871	53784173	2	-2.0192
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	17	53786452	76243458	13150	-0.0011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	17	76244388	76248774	2	2.0398
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	17	76248895	78643088	962	0.0034
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	18	1543	74691533	50065	0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	18	74698540	74707171	7	-1.1187
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	18	74707894	76116029	741	0.0149
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	19	41910	5457659	1599	-0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	19	5461239	5461580	2	-2.3718
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	19	5461653	32648879	9684	-0.0011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	19	32651829	32733352	16	-0.6279
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	19	32733670	48096479	9326	-0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	19	48104372	48206027	58	0.4449
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	19	48211202	60974181	6816	-0.0093
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	19	60974347	60974879	3	-2.5054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	19	60978105	63789666	1850	0.0079
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	20	9305	654823	484	-0.0162
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	20	655598	655712	2	-2.4255
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	20	659775	62426597	42005	0.0051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	21	9758742	22573005	6464	-0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	21	22577771	22586529	9	-0.8192
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	21	22588870	46921385	17939	0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	22	14432528	21592981	3920	-0.0252
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	22	21593242	21593257	2	-2.0297
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	22	21593274	41227226	13505	-0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	22	41229384	41262362	20	0.4463
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	22	41264406	46114682	3433	-0.0018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	22	46117025	46118866	3	-1.335
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	22	46118913	49581321	2676	-0.0252
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	X	108477	76270041	40138	0.0034
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	X	76278683	76440325	17	-0.7196
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	X	76461534	154835548	44450	-0.0011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	Y	2710438	6161425	837	-2.4927
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	Y	6167901	6373572	91	-3.8352
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	Y	6375579	7457635	455	-2.8999
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	Y	7459842	10369564	1203	-3.1903
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	Y	10384614	14099670	951	-2.9028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	Y	14099736	14103917	3	-7.7452
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	Y	14104283	17543786	1822	-3.031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	Y	17547696	17807379	113	-3.6753
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	Y	17809644	18080026	142	-2.8957
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	Y	18080874	19484001	673	-3.5903
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	Y	19484450	22957565	1295	-3.1304
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	Y	22969615	23301839	56	-4.0321
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	Y	23302191	24385184	148	-3.3297
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	Y	24385517	24423898	15	-4.7419
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	Y	24428795	25040317	173	-3.2068
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	Y	25040616	25725360	84	-4.0549
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	Y	25776875	25938472	35	-2.5595
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	Y	25944418	25969325	12	-4.3204
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	Y	25969782	26129939	46	-2.7
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	Y	26130472	26687080	195	-3.5914
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	Y	26699115	26731140	12	-5.1986
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	Y	26731407	26861404	51	-3.5088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C09_895790	Y	26866725	57427647	175	-2.7323
