Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	51598	16688117	8703	-0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	16688677	17134475	175	-0.4269
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	17134819	72541504	34052	0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	72541524	72583736	45	-1.5729
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	72584492	108531282	22983	0.0049
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	108535758	108536400	2	-3.5525
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	108539019	112497610	2699	0.0128
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	112497716	112507605	27	0.5457
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	112507641	143553915	5232	0.0027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	143560896	143560909	3	1.3207
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	143576984	147204529	1129	0.0083
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	147214334	147788464	170	0.4345
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	147788470	150822330	1491	0.0109
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	150822391	150857118	35	-1.4452
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	150857189	151026302	170	0.0376
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	151028547	151035324	37	0.8819
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	151040529	195079130	29614	0.0031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	195079153	195082414	2	-3.1911
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	195083353	220433291	17427	0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	220441457	220443627	2	-2.932
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	220448757	247191011	18503	0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	2	2784	4183562	2990	0.0114
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	2	4191739	4201042	36	-2.1673
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	2	4201387	52608385	34165	0.0055
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	2	52612257	52635046	33	0.4621
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	2	52641453	154598055	58492	0.006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	2	154604221	154604728	2	-2.8238
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	2	154608469	208063200	32073	0.0061
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	2	208063423	208067581	16	-0.8213
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	2	208067721	242738129	22119	0.0054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	35345	26576104	20038	0.0155
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	26576764	26586889	9	-1.9441
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	26586902	68828949	27781	0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	68828974	68830103	13	-1.5283
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	68831448	75498553	4876	0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	75503860	75651239	62	-0.7436
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	75655239	75659994	3	-2.8438
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	75661548	75722197	11	-0.8977
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	75728074	89752705	7878	0.0082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	89754023	89761289	9	-0.8517
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	89767997	131246388	21889	0.0054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	131249276	131288926	51	-1.5575
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	131289614	133472037	1442	0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	133475427	133478374	4	-1.7372
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	133483167	163990962	18825	0.0056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	163995351	164108689	70	-1.8261
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	164109266	194360596	19179	0.007
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	194360656	194365597	19	1.306
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	194369129	199380515	2705	0.0066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	2281	2277430	883	-0.0108
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	2277453	2277764	2	-1.7795
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	2278053	9066075	4354	-0.008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	9070328	9080356	5	-0.9427
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	9087947	9819488	549	-0.0128
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	9823258	9844264	34	-0.9923
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	9844280	11995571	1828	-0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	11995586	11995687	2	-1.7325
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	11995751	25165678	9373	0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	25166145	25182971	17	0.6411
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	25187367	29740359	2996	0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	29744306	29748810	5	-0.9371
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	29752769	31940709	1343	0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	31940724	31941015	4	-1.0223
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	31941073	34455449	1416	0.027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	34462895	34506267	39	0.4729
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	34506308	44694376	6638	0.0077
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	44698277	44701092	6	-1.1506
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	44705726	48962605	2338	0.0145
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	48985949	48986112	2	-2.1632
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	48991977	69021159	10503	0.0073
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	69027207	69636528	95	0.3662
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	69636712	70158099	303	0.0273
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	70162233	70266388	54	-0.549
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	70266611	115393149	27329	0.0048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	115394772	115403678	24	0.6999
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	115403701	172605017	34715	0.0057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	172605106	172614033	11	-0.853
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	172614285	189670815	11558	0.0146
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	189670869	189673909	11	0.7506
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	189674080	191261904	966	0.0083
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	68532	738748	308	0.0078
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	751371	853686	35	0.5215
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	853839	10891090	8478	0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	10891368	10897748	4	-1.149
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	10899476	12853889	1395	0.0069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	12868780	12873076	9	1.0406
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	12877411	15771492	1979	0.0088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	15772222	15773597	11	-0.67
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	15776346	21412601	3501	0.0133
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	21413596	21413610	2	-2.9185
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	21421823	57357403	20158	0.0048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	57361784	57369290	32	1.4576
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	57374114	178040428	75569	0.0043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	178042581	178045769	3	-2.5916
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	178051461	180722926	1551	-0.0074
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	94661	29945051	21726	0.0071
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	29945166	29957104	15	1.0842
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	29957246	31388802	675	0.0271
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	31394255	31395201	5	1.2423
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	31395480	32599282	526	0.0291
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	32600823	32734596	54	-0.8074
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	32758590	32794174	37	0.0798
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	32796593	32798808	11	0.7952
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	32798923	54039110	13690	0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	54039189	54039814	6	-1.1738
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	54043307	67065007	5455	0.0062
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	67065744	67105350	55	-0.7599
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	67106127	74648586	5004	0.0141
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	74648953	74654017	8	0.8575
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	74654069	77071229	1467	-0.0088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	77071668	77080722	13	-0.6117
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	77080825	103841522	16875	0.0066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	103844669	103872163	47	0.7678
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	103872363	170892930	44201	0.0078
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	52911	25188663	18145	0.0107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	25190746	25207760	14	-1.1354
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	25210501	29687006	3334	0.0069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	29693664	29693995	2	-1.4662
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	29694173	38261521	5927	0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	38264360	38344450	110	-0.4546
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	38344670	54347867	11016	0.0043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	54353999	54354011	6	-2.2435
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	54360982	63462419	2777	-0.0169
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	63462671	63467404	3	-1.7222
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	63468395	83385552	10738	0.006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	83389786	83389793	2	-3.2214
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	83390455	101889169	10692	0.0178
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	102022781	102104326	7	-0.9981
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	102104345	109221034	4570	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	109224328	109228448	24	0.4126
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	109228480	109241146	11	1.0881
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	109241218	110848021	1090	-0.0072
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	110852528	110853895	6	-1.058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	110856650	111312195	252	0.0378
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	111312424	111314796	2	-2.1949
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	111316273	125832792	8683	0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	125832887	125833851	10	-1.4461
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	125834112	133435735	4708	4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	133435751	133446174	25	-0.5161
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	133446205	141409593	5207	-0.0019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	141416112	141438576	42	-0.6332
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	141441750	143504885	1315	-0.0483
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	143527185	143583246	14	-1.5409
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	143583501	143592888	6	-0.2303
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	143601243	143697880	24	-1.4696
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	143705862	157414564	8809	0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	157417209	157502542	75	0.6029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	157503862	158819765	803	0.0096
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	21254	5581675	6089	0.0168
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	5586134	5594496	28	-0.6546
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	5594564	6054328	609	0.0972
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	6054340	6056101	24	-0.3972
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	6056137	7241738	1103	0.0229
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	7241751	7847316	148	-0.2958
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	7864332	25030494	13827	0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	25031417	25040250	23	0.6438
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	25047021	40301274	9674	0.002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	40302954	40303382	7	-1.2418
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	40303482	40304204	9	-0.4933
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	40304601	40308668	18	-1.1742
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	40312067	112364214	41404	0.0064
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	112364257	112364421	3	-2.5466
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	112364436	129527668	11441	0.0097
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	129533814	129534112	3	-1.6224
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	129534297	146268959	11470	0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	9	36587	6685986	6380	0.0164
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	9	6691145	6712102	14	-0.6458
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	9	6712212	44667855	25044	0.0121
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	9	44669747	44795733	35	-1.2193
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	9	44806024	138193336	47677	0.0049
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	9	138196600	138198544	3	-1.5259
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	9	138199096	140211215	707	-0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	62759	18213969	14884	0.0114
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	18225129	18263653	4	-2.1563
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	18270265	19980850	1397	0.0237
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	19981014	19981033	2	-2.2075
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	19981457	20880880	738	0.005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	20890118	20893540	6	-1.5104
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	20902433	24415269	2196	0.0087
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	24417680	24417688	7	1.0987
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	24417924	46532105	12458	0.007
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	46532553	46533096	3	-2.5919
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	46533268	48522382	520	-0.0673
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	48548797	48911485	14	-0.8664
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	48911498	51527225	1456	-0.0062
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	51537240	51561926	2	1.6138
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	51573774	66976282	11015	0.0091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	66977929	66992801	29	-0.6091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	66992932	70445975	2212	0.0302
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	70447719	70447779	2	-2.7116
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	70451497	135356694	44072	0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	11	188510	5744656	3302	8e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	11	5744668	5765715	31	-0.5639
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	11	5765914	20687337	11034	0.0018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	11	20692150	20692989	2	-1.9383
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	11	20693376	51193834	19939	0.0093
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	11	51209566	51213821	3	-1.4957
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	11	51231886	79645161	13678	0.0036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	11	79645196	79645212	2	-2.8105
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	11	79645334	134449982	39101	0.008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	12	20703	736231	418	0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	12	739370	746507	20	-0.8367
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	12	746549	8372907	5147	0.002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	12	8373127	8384896	5	-1.6919
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	12	8386223	9521823	610	-0.0263
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	12	9525137	9619559	24	-1.6109
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	12	9626236	11402844	1188	0.0119
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	12	11402845	11434673	29	-0.8669
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	12	11443459	36273993	16292	0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	12	36298834	36300285	2	-2.4268
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	12	36320625	122522702	53989	0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	12	122525212	122649851	47	0.5146
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	12	122660723	132288262	7228	0.0233
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	13	17924949	57482791	26540	0.0069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	13	57488282	57491273	4	-1.3193
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	13	57491347	71374989	8565	0.0103
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	13	71375556	71378557	4	-3.1966
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	13	71378606	114126499	29119	0.0076
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	14	18072124	18763249	50	-0.1013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	14	18767885	19493212	140	-0.3968
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	14	19494766	99226524	52062	-4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	14	99227544	99230133	2	-1.8918
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	14	99232130	105350348	2777	5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	14	105350433	105414008	37	-0.415
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	14	105414024	105609107	60	-0.0509
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	14	105612798	105640508	14	0.8769
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	14	105645163	106356482	415	-0.0588
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	15	18276341	28157323	5099	-0.008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	15	28173703	28712897	114	-0.3945
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	15	28717792	68249064	25644	-0.0011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	15	68249719	68250006	2	-1.8614
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	15	68258317	69399357	699	-0.0178
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	15	69399451	69403515	3	-1.3689
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	15	69404788	74678682	2771	0.002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	15	74678796	74682830	19	-2.0597
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	15	74689234	88126825	8429	0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	15	88127397	88130196	4	-1.4258
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	15	88130648	100286563	9234	0.005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	16	777	22349521	14833	0.0035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	16	22465433	22625805	75	-0.4067
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	16	22625887	28655035	4053	0.0069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	16	28660952	29004990	80	0.5044
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	16	29005633	54354011	8257	-0.008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	16	54354076	54379898	19	-0.7099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	16	54379945	88815036	25149	3e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	526	55661	27	0.0199
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	59064	59143	2	-1.8767
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	59164	18296117	11403	0.007
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	18299671	18437031	31	0.5627
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	18438028	31460645	6914	0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	31460821	31509204	38	0.4775
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	31552238	36675234	2541	-0.0017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	36676540	36684057	24	1.0682
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	36686250	41518916	2506	0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	41521621	41718140	123	0.6425
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	41719947	41785076	9	-0.1099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	41791196	42107479	40	-0.6101
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	42120174	53042488	7010	-0.0023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	53043332	53043992	2	-1.9739
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	53046992	78643088	14592	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	18	1543	82133	9	0.6346
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	18	87829	61913280	40374	0.0068
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	18	61918120	61918902	3	-2.5174
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	18	61926575	76116029	10373	0.0235
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	19	41910	15685071	6662	-0.0051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	19	15685942	15685943	2	-2.1958
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	19	15686598	63789666	22672	0
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	20	9305	1508951	1204	0.0031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	20	1508999	1541893	42	-1.2687
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	20	1545946	52078189	33729	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	20	52078204	52088051	32	-0.7623
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	20	52091480	62426597	7453	7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	21	9758742	9962513	33	-0.4643
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	21	9964803	41790001	21123	0.0056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	21	41790065	41790083	2	-1.8972
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	21	41790207	43792481	1473	-0.0019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	21	43795301	43797240	2	-2.9226
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	21	43798095	46921385	1766	-0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	22	14432528	22674422	4619	-0.0163
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	22	22680529	22726814	19	-1.91
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	22	22731529	24066672	874	-0.0107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	22	24066674	24066677	4	-1.3898
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	22	24066678	49581321	18019	-0.0055
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	108477	7571058	3797	0.0216
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	7571105	7571263	3	-3.4975
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	7571715	19378639	7968	-0.0099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	19382166	19382705	3	3.2802
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	19383022	22122621	1401	0.0086
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	22122686	22122917	2	-3.6399
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	22123915	24021341	1514	0.0177
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	24022345	24026358	5	-1.7917
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	24035732	27462914	2140	0.0251
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	27463019	27463432	2	-2.0729
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	27463810	28762543	804	0.0381
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	28762785	28766509	6	0.9583
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	28767319	29089513	197	0.0184
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	29092123	29092222	3	-2.9819
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	29092234	103140431	36352	0.0069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	103144645	103192014	59	0.8578
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	103198403	105207748	1032	0.0149
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	105208449	105208455	2	-4.5301
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	105208680	128561814	13393	0.0077
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	128562880	128564524	3	-3.204
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	128565807	154835548	15583	0.0028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	Y	2710438	7992801	1747	-0.9712
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	Y	7993618	7994114	3	-2.6454
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	Y	7994717	57427647	6835	-0.9565
