Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	61735	16815530	8703	-0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	16816090	17261888	175	-0.4269
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	17262232	72768916	34130	0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	72768936	72811148	45	-1.5729
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	72811904	108729759	22974	0.005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	108734235	108734877	2	-3.5525
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	108737496	112696087	2699	0.0128
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	112696193	112706082	27	0.5457
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	112706118	144842558	5228	0.0027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	144849539	144849552	3	1.3207
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	144865627	148937905	1129	0.0083
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	148947710	149521840	170	0.4345
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	149521846	152555706	1492	0.0112
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	152555767	152590494	35	-1.4452
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	152590565	152759678	170	0.0376
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	152761923	152768700	37	0.8819
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	152773905	196812507	29613	0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	196812530	196815791	2	-3.1911
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	196816730	222366668	17428	0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	222374834	222377004	2	-2.932
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	222382134	249224388	18500	0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	2	12784	4205687	2990	0.0114
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	2	4213864	4223167	36	-2.1673
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	2	4223512	52754881	34162	0.0055
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	2	52758753	52781542	33	0.4621
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	2	52787949	154889809	58480	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	2	154895975	154896482	2	-2.8238
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	2	154900223	208354955	32076	0.0061
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	2	208355178	208359336	16	-0.8213
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	2	208359476	243089456	22119	0.0055
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	60345	26601100	20037	0.0154
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	26601760	26611885	9	-1.9441
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	26611898	68746259	27781	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	68746284	68747413	13	-1.5283
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	68748758	75415863	4875	0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	75421170	75568549	62	-0.7436
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	75572549	75577304	3	-2.8438
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	75578858	75639507	11	-0.8977
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	75645384	89670015	7874	0.0082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	89671333	89678599	9	-0.8517
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	89685307	129763698	21888	0.0054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	129766586	129806236	51	-1.5575
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	129806924	131989347	1442	0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	131992737	131995684	4	-1.7372
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	132000477	162508268	18824	0.0056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	162512657	162625995	70	-1.8261
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	162626572	192877902	19180	0.007
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	192877962	192882903	19	1.306
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	192886435	197896118	2705	0.0066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	12281	2307632	883	-0.0108
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	2307655	2307966	2	-1.7795
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	2308255	9456977	4354	-0.008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	9461230	9471258	5	-0.9427
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	9478849	10210390	549	-0.0128
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	10214160	10235166	34	-0.9923
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	10235182	12386473	1829	-0.0056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	12386488	12386589	2	-1.7325
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	12386653	25556580	9372	0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	25557047	25573873	17	0.6411
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	25578269	34779054	5764	0.0066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	34786500	34829872	39	0.4729
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	34829913	44999619	6637	0.0077
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	45003520	45006335	6	-1.1506
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	45010969	49267848	2338	0.0145
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	49291192	49291355	2	-2.1632
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	49297220	69338564	10506	0.0071
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	69344612	69601939	89	0.3852
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	69602123	70123510	306	0.0272
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	70127644	70231799	54	-0.549
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	70232022	115173700	27333	0.0048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	115175323	115184229	24	0.6999
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	115184252	172368442	34719	0.0057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	172368531	172377458	11	-0.853
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	172377710	189433821	11558	0.0146
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	189433875	189436915	11	0.7506
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	189437086	191027923	965	0.0086
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	15532	685748	307	0.008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	698371	800686	35	0.5215
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	800839	10838090	8481	0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	10838368	10844748	4	-1.149
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	10846476	12800889	1395	0.0069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	12815780	12820076	9	1.0406
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	12824411	15718492	1979	0.0088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	15719222	15720597	11	-0.67
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	15723346	21376844	3501	0.0133
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	21377839	21377853	2	-2.9185
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	21386066	57321646	20154	0.0048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	57326027	57333533	32	1.4576
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	57338357	178107822	75572	0.0043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	178109975	178113163	3	-2.5916
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	178118855	180790320	1551	-0.0074
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	149661	29837072	21725	0.0071
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	29837187	29849125	15	1.0842
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	29849267	31280823	675	0.0271
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	31286276	31287222	5	1.2423
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	31287501	32452801	514	0.0385
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	32452929	32626618	68	-0.7013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	32650612	32686196	37	0.0798
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	32688615	32690830	11	0.7952
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	32692227	53931151	13689	0.0051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	53931230	53931855	6	-1.1738
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	53935348	67008286	5456	0.0063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	67009023	67048629	55	-0.7599
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	67049406	74591858	5003	0.014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	74592225	74597289	8	0.8575
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	74597341	77014509	1467	-0.0088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	77014948	77024002	13	-0.6117
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	77024105	103734829	16874	0.0066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	103737976	103765470	47	0.7678
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	103765670	171051005	44208	0.0078
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	43355	25222138	18144	0.0108
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	25224221	25241235	14	-1.1354
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	25243976	29720481	3333	0.0067
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	29727139	29727470	2	-1.4662
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	29727648	38294996	5927	0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	38297835	38377925	110	-0.4546
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	38378145	54380373	11014	0.0043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	54386505	54386517	6	-2.2435
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	54393488	63824984	2777	-0.0169
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	63825236	63829969	3	-1.7222
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	63830960	83547616	10743	0.0061
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	83551850	83551857	2	-3.2214
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	83552519	102102164	10692	0.0178
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	102235712	102317090	7	-0.9981
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	102317109	109433798	4571	0.006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	109437092	109441212	24	0.4126
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	109441244	109453910	11	1.0881
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	109453982	111060785	1090	-0.0072
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	111065292	111066659	6	-1.058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	111069414	111524959	252	0.0378
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	111525188	111527560	2	-2.1949
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	111529037	126045556	8684	0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	126045651	126046615	10	-1.4461
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	126046876	133785195	4709	4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	133785211	133795634	25	-0.5161
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	133795665	141763124	5207	-0.0019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	141769643	141792107	42	-0.6332
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	141795281	143873952	1313	-0.0479
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	143896252	143952313	14	-1.5409
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	143952568	143961955	6	-0.2303
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	143970310	144066947	24	-1.4696
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	144074929	157721803	8810	0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	157724448	157809781	75	0.6029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	157811101	159127004	803	0.0096
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	31254	5594267	6090	0.0169
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	5598726	5607088	28	-0.6546
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	5607156	6066920	609	0.0972
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	6066932	6068693	24	-0.3972
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	6068729	7254328	1103	0.0229
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	7254341	7809906	148	-0.2958
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	7826922	24974577	13826	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	24975500	24984333	23	0.6438
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	24991104	40182117	9675	0.002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	40183797	40184225	7	-1.2418
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	40184325	40185047	9	-0.4933
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	40185444	40189511	18	-1.1742
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	40192910	112295038	41408	0.0064
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	112295081	112295245	3	-2.5466
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	112295260	129458486	11443	0.0096
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	129464632	129464930	3	-1.6224
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	129465115	146298155	11470	0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	9	46587	6695986	6382	0.0164
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	9	6701145	6722102	14	-0.6458
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	9	6722212	44727859	25050	0.0121
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	9	44729751	44855737	35	-1.2193
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	9	44866028	139053515	47684	0.0049
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	9	139056779	139058723	3	-1.5259
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	9	139059275	141091394	707	-0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	72759	18173963	14884	0.0114
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	18185123	18223647	4	-2.1563
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	18230259	19940844	1397	0.0237
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	19941008	19941027	2	-2.2075
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	19941451	20840874	737	0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	20850112	20853534	6	-1.5104
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	20862427	24375263	2196	0.0087
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	24377674	24377682	7	1.0987
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	24377918	47112099	12458	0.007
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	47112547	47113090	3	-2.5919
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	47113262	48902376	520	-0.0673
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	48928791	49241479	14	-0.8664
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	49241492	67306276	12473	0.0076
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	67307923	67322795	29	-0.6091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	67322926	70775969	2212	0.0302
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	70777713	70777773	2	-2.7116
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	70781491	135506704	44070	0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	11	198510	5788080	3301	8e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	11	5788092	5809139	31	-0.5639
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	11	5809338	20730761	11033	0.0018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	11	20735574	20736413	2	-1.9383
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	11	20736800	51337258	19937	0.0093
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	11	51352990	51357245	3	-1.4957
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	11	51375310	79967513	13679	0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	11	79967548	79967564	2	-2.8105
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	11	79967686	134944770	39093	0.0081
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	12	150442	865970	418	0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	12	869109	876246	20	-0.8367
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	12	876288	8481640	5147	0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	12	8481860	8493629	5	-1.6919
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	12	8494956	9630556	609	-0.0257
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	12	9633870	9728292	25	-1.5679
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	12	9734969	11511577	1187	0.0119
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	12	11511578	11543406	29	-0.8669
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	12	11552192	37987726	16289	0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	12	38012567	38014018	2	-2.4268
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	12	38034358	123956749	53986	0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	12	123959259	124083898	47	0.5146
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	12	124094770	133778189	7227	0.0233
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	13	19026949	72476988	35106	0.0076
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	13	72477555	72480556	4	-3.1966
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	13	72480605	115108397	29118	0.0076
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	14	19002124	19693249	50	-0.1013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	14	19697885	20423372	140	-0.3968
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	14	20424926	100156771	52059	-4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	14	100157791	100160380	2	-1.8918
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	14	100162377	106279303	2777	5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	14	106279388	106342963	37	-0.415
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	14	106342979	106538062	60	-0.0509
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	14	106541753	106569463	14	0.8769
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	14	106574118	107285437	415	-0.0588
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	15	20016328	30370031	5100	-0.0081
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	15	30386411	30925605	114	-0.3945
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	15	30930500	70462010	25641	-0.0011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	15	70462665	70462952	2	-1.8614
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	15	70471263	71612303	699	-0.0178
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	15	71612397	71616461	3	-1.3689
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	15	71617734	76891627	2771	0.002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	15	76891741	76895775	19	-2.0597
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	15	76902179	90325821	8429	0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	15	90326393	90329192	4	-1.4258
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	15	90329644	102469040	9233	0.005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	16	60777	22442020	14832	0.0035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	16	22557932	22718304	75	-0.4067
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	16	22718386	28747534	4053	0.0069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	16	28753451	29097489	80	0.5044
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	16	29098132	55796510	8256	-0.008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	16	55796575	55822397	19	-0.7099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	16	55822444	90287535	25070	3e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	526	55661	27	0.0199
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	59064	59143	2	-1.8767
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	59164	15161172	9784	0.0099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	15161977	15162389	2	-1.704
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	15162488	18355392	1618	-0.0081
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	18358946	18496306	31	0.5627
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	18497303	34436532	6914	0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	34436708	34485091	38	0.4775
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	34528125	39421708	2539	-0.0018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	39423014	39430531	24	1.0682
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	39432724	44163098	2506	0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	44165803	44362363	123	0.6425
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	44364170	44429320	9	-0.1099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	44435454	44752300	40	-0.6101
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	44764994	55687489	7012	-0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	55688333	55688993	2	-1.9739
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	55691993	81049726	14591	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	18	11543	92133	9	0.6346
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	18	97829	63762300	40371	0.0068
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	18	63767140	63767922	3	-2.5174
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	18	63775595	78015057	10373	0.0235
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	19	90910	15824071	6662	-0.0051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	19	15824942	15824943	2	-2.1958
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	19	15825598	59097854	22671	0
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	20	61305	1560951	1204	0.0031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	20	1560999	1593893	42	-1.2687
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	20	1597946	52644782	33732	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	20	52644797	52654644	32	-0.7623
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	20	52658073	62956153	7453	7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	21	10736871	10940642	33	-0.4643
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	21	10942932	42868131	21123	0.0057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	21	42868195	42868213	2	-1.8972
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	21	42868337	44968053	1473	-0.0019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	21	44970873	44972812	2	-2.9226
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	21	44973667	48096957	1765	-0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	22	16052528	24344422	4619	-0.0163
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	22	24350529	24396814	19	-1.91
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	22	24401529	25736672	874	-0.0107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	22	25736674	25736677	4	-1.3898
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	22	25736678	51234455	18019	-0.0054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	168477	7561058	3797	0.022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	7561105	7561263	3	-3.4975
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	7561715	19468718	7969	-0.0096
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	19472245	19472784	3	3.2802
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	19473101	22212700	1401	0.0086
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	22212765	22212996	2	-3.6399
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	22213994	24111420	1515	0.0175
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	24112424	24116437	5	-1.7917
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	24125811	27552993	2140	0.0251
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	27553098	27553511	2	-2.0729
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	27553889	28852622	804	0.0381
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	28852864	28856588	6	0.9583
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	28857398	29179592	197	0.0184
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	29182202	29182301	3	-2.9819
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	29182313	103253775	36335	0.0077
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	103257989	103305358	59	0.8578
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	103311747	105321092	1032	0.0149
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	105321793	105321799	2	-4.5301
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	105322024	128734133	13398	0.0076
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	128735199	128736843	3	-3.204
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	128738126	155182354	15582	0.0027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	Y	2650438	7932801	1785	-0.9689
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	Y	7933618	7934114	3	-2.6454
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	Y	7934717	59018259	6841	-0.9562
