Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	1	3208470	245880329	128919	8e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	2	474222	242124735	131121	0.0016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	3	526235	199023074	106277	0.0011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	4	1043934	189836143	102618	0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	967233	157066337	86263	5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	157067166	157068424	2	-1.8633
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	157068892	177581049	12704	-0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	177582592	177583599	2	-1.6987
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	5	177636633	180293075	1405	-0.0102
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	6	959281	170745844	96360	0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	671810	25188663	13132	-5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	25190746	25198644	8	-1.0688
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	25210944	63462419	20342	6e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	63462671	63467404	3	-1.7222
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	63468395	83385552	9224	0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	83389786	83389793	2	-3.2214
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	7	83390455	158077879	38526	0.0017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	607667	129527668	72019	0.0035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	129533814	129534112	3	-1.6224
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	8	129534297	145304484	9405	0.0035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	9	779932	140058573	67940	0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	405240	19980850	13898	0.0045
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	19981014	19981033	2	-2.2075
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	10	19981457	135075077	66867	0.0011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	11	446120	20687337	12901	-5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	11	20692150	20692989	2	-1.9383
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	11	20693376	133647740	64267	0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	12	760163	122522702	69525	6e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	12	122525212	122649851	47	0.5146
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	12	122660723	131671419	4269	0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	13	18348806	114005560	56551	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	14	19571208	99226524	46813	-8e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	14	99227544	99230133	2	-1.8918
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	14	99232130	105059083	2580	0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	15	21238778	88126825	37425	-0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	15	88127397	88130196	4	-1.4258
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	15	88130648	99701830	7038	-0.0018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	16	593460	87907437	40810	-0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	17	933971	78510305	36947	6e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	18	319586	75210228	42593	0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	19	235018	9124536	2861	-9e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	19	9124806	9125466	2	-2.0662
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	19	9127296	63570038	21060	-4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	20	403764	61690281	37238	0.0011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	21	14269492	41790001	18179	-0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	21	41790065	41790083	2	-1.8972
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	21	41790207	42581559	592	-0.0121
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	21	42582436	42582751	2	-1.4606
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	21	42582769	46503202	1793	0.0019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	22	15803930	47717016	16901	-0.0017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	3167107	10393428	1768	0.0142
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	10393550	10394215	2	-2.4463
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	10395519	11653359	738	-0.0035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	11653475	11653727	2	-2.4717
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	11654635	12573367	805	0.0051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	12575042	12575284	2	-3.1787
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	12575892	17754249	2633	-0.0087
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	17754337	17755444	3	-2.21
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	17756673	22122621	1810	0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	22122686	22122917	2	-3.6399
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	22123915	128561814	44359	0.007
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	128562880	128564524	3	-3.204
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	128565807	128592287	20	0.0507
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	128594522	128595064	2	-3.4745
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_C11_895766	X	128595336	154558783	11369	0.0046
