Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	1	61735	98588	16	-0.7769
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	1	98602	50012071	27595	0.1224
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	1	50012288	50209414	76	-0.183
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	1	50214121	72763370	15353	0.12
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	1	72768418	72811148	48	1.2218
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	1	72811904	106013376	21030	0.1188
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	1	106019205	106022375	17	-2.2112
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	1	106024055	112690326	4640	0.1178
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	1	112695965	112697241	23	-2.0376
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	1	112697376	152555527	8042	0.1305
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	1	152555706	152586238	31	1.5885
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	1	152586278	152759678	175	0.1294
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	1	152761923	152768700	37	-1.6647
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	1	152773905	169216937	11341	0.1123
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	1	169233974	169241766	7	-2.2306
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	1	169242401	187715854	12216	0.1109
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	1	187717560	187721369	2	-1.7372
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	1	187724610	199111972	7456	0.1031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	1	199112471	199113011	3	-1.1895
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	1	199113840	199539063	303	0.1283
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	1	199542563	199545705	6	-0.5693
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	1	199546187	210071062	7125	0.1127
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	1	210081613	210082065	2	-1.6346
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	1	210083984	227425301	11688	0.1188
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	1	227426072	227426406	3	-1.9588
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	1	227429178	229811169	1376	0.0947
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	1	229816856	229820196	3	-3.1417
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	1	229820456	249224388	14063	0.1135
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	2	12784	34691069	24108	0.0872
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	2	34699315	34737057	46	-1.9975
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	2	34737163	35975973	878	0.0971
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	2	35977790	35987916	6	-1.8832
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	2	35987947	41238618	3949	0.0998
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	2	41238673	41243427	15	-0.5051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	2	41243455	46724917	4134	0.108
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	2	46725501	46725516	2	-2.2702
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	2	46729409	52754881	4068	0.1075
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	2	52758753	52781542	33	-0.5959
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	2	52787949	87306948	22008	0.0912
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	2	87309263	87996372	194	0.4006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	2	88024667	184794400	54733	0.0865
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	2	184794514	184802441	16	-2.4975
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	2	184808589	243089456	35816	0.0862
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	60345	1333797	1091	0.1879
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	1334380	1334530	2	-1.1967
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	1338259	4593065	3011	0.1173
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	4593188	4618302	28	-0.401
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	4618323	6651128	1717	0.0994
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	6651211	6653244	21	-0.5073
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	6653332	16239063	7078	0.0851
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	16240556	16241179	6	-0.9183
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	16241325	37977417	14738	0.0904
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	37982108	37982757	4	-1.1775
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	37982826	37983831	9	-0.5036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	37983951	37986928	5	-1.4607
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	37987106	65188453	17675	0.0992
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	65189235	65210452	53	-0.8415
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	65216349	68746164	2423	0.0679
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	68746259	68747413	14	-1.4477
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	68748758	98919134	15938	0.0741
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	98920512	98949314	51	0.4505
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	98949421	125669048	16348	0.0821
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	125673383	125675963	3	-1.7795
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	125680500	129762859	2393	0.0735
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	129763698	129798735	46	-1.3452
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	129798781	129806236	6	-0.5349
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	129806924	131611885	1095	0.0724
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	131612265	131612296	2	-1.27
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	131615545	136019099	2937	0.0778
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	136022951	136025426	2	1.4401
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	136038541	146379189	6366	0.083
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	146382994	146391984	5	-0.5408
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	146393075	148963395	1511	0.1184
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	148963461	148966743	22	-0.5165
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	148966913	162513092	8341	0.0827
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	162513149	162625995	67	-1.8928
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	162626572	162714517	72	0.1537
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	162717727	162719562	2	-2.6936
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	162726159	175883749	8091	0.0839
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	175888059	175914479	33	-0.9273
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	175916221	192877902	10993	0.0855
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	192877962	192882869	17	0.8271
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	192882888	195285664	1488	0.1035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	195285898	195474763	48	-0.5336
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	3	195478694	197896118	1174	0.1008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	12281	10214160	5803	-0.016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	10223416	10235166	33	-1.0319
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	10235182	34778975	16986	-0.0225
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	34779004	34824183	41	0.614
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	34824725	42762117	5239	-0.0224
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	42764949	42767863	2	-1.5812
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	42771246	53721865	4325	-0.0154
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	53725023	53725375	2	-1.3968
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	53726099	55497886	1274	-0.0047
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	55501726	55501921	3	-2.0768
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	55505360	64697469	5747	-0.0251
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	64697517	64708258	28	-0.3427
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	64716431	65824158	668	-0.0372
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	65824252	65824270	2	-2.2392
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	65824313	108047914	25555	-0.0241
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	108050221	108068413	23	0.3302
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	108071519	115173700	4430	-0.0218
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	115175323	115182175	23	-1.4192
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	115184229	161946759	28113	-0.0238
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	161952228	162003266	43	0.8878
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	162006824	168964492	4384	-0.0455
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	168965750	168979375	22	0.4081
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	168979453	172369346	2171	-0.0248
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	172374884	172377444	8	1.5497
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	172377458	172987928	399	-0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	172989148	172989533	12	-1.9737
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	172995979	173428342	236	-0.0084
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	173428471	173453708	5	0.7909
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	173455246	189221258	10704	-0.0274
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	189221360	189221375	2	-1.472
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	189221424	190189043	788	0.0256
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	190195118	190199264	4	-2.221
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	4	190199771	191027923	386	-0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	15532	8390368	6692	0.0409
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	8396461	8396885	3	-1.4371
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	8398386	12819313	3528	0.0618
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	12819375	12838533	11	0.8085
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	12849201	21449276	5537	0.0704
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	21451200	21452438	5	1.196
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	21452496	21564936	34	0.3651
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	21565058	21567036	4	0.8353
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	21573438	45154301	14612	0.0462
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	45157427	45158875	2	-1.7788
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	45161432	50509852	908	0.1158
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	50509905	50511016	3	-1.238
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	50511652	57321646	4553	0.0544
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	57326027	57333533	32	-0.4745
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	57338357	103851221	26862	0.0645
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	103860373	103860548	3	2.2835
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	103860604	106227527	1409	0.0685
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	106229673	106232873	14	-1.3709
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	106233022	106233117	6	-0.7616
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	106240576	112955331	4682	0.0529
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	112956600	112980317	13	-1.6062
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	112980621	114756455	1269	0.0582
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	114756637	114756862	5	1.01
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	114759078	117386617	2008	0.0676
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	117388422	117389085	11	-0.9561
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	117404340	118658798	831	0.0649
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	118659305	118659579	2	-1.3774
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	118660289	175373508	37312	0.0596
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	175387546	175426693	8	0.9358
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	175431575	180361838	2548	0.0534
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	180372168	180417911	21	0.5501
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	5	180418103	180790320	172	0.0627
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	149661	253861	99	0.6471
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	254267	277360	13	0.0211
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	278146	286393	5	0.5659
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	290598	294725	6	-0.1109
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	294837	17101664	13309	0.6594
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	17102758	17102858	2	-0.9306
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	17102997	29841021	8327	0.6578
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	29843434	29849267	8	-0.6391
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	29850196	32431292	1188	0.6371
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	32431552	32570365	37	1.2961
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	32573771	32686196	72	0.6945
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	32688615	32690830	11	1.6673
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	32692227	53931275	13703	0.6511
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	53931380	53931855	4	3.3512
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	53935348	57299309	2014	0.6399
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	57308995	57522865	79	0.1231
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	57529306	58082951	234	-0.1957
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	58140300	58422642	92	0.6638
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	58426052	58427069	5	-0.2057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	58432574	58774716	154	0.7207
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	61886440	65710729	2014	-0.3331
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	65711399	65713792	3	-1.8295
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	65717384	67038046	896	-0.3183
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	67040913	67042897	6	-2.5574
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	67043192	74591858	5012	-0.3366
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	74592225	74597341	9	0.7903
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	74601410	77014948	1466	-0.3444
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	77016900	77017069	7	0.8877
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	77017077	77024361	10	-0.6425
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	77024376	77313667	189	-0.357
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	77315831	77327285	13	-4.7471
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	77328692	77436532	80	-0.398
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	77439868	77452673	19	0.3684
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	77452689	78947943	963	-0.3508
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	78949821	79041809	133	7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	79045766	81277987	1425	-0.3295
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	81284189	81294575	37	-0.0317
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	81294922	103734825	14006	-0.3427
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	103734829	103762061	47	0.4926
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	103765470	105948088	1347	-0.3482
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	105951839	105952072	2	-2.3203
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	105952403	152657391	29936	-0.3433
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	152657508	152658142	2	-3.6596
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	152658216	161032565	5634	-0.348
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	161032719	161033283	5	0.8016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	161068042	168573651	5550	-0.3628
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	168577928	168577986	2	-2.6763
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	168583006	170919495	1695	-0.3815
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	6	170982327	171051005	4	-1.0003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	43355	54705	17	-0.3899
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	60654	62643	2	-3.9324
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	63281	4683776	2499	-0.308
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	4683837	4683874	2	-2.9527
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	4685128	13587412	6347	-0.2696
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	13590144	13591197	7	-1.111
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	13591484	22434780	7213	-0.2722
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	22435472	22436487	2	-3.5603
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	22438754	33128246	7698	-0.3067
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	33130687	33185482	34	0.3133
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	33189793	38294996	3598	-0.3132
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	38297835	38335520	68	0.0347
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	38339604	54380373	11057	-0.3001
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	54386505	54386517	6	1.3499
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	54393488	64568852	3134	-0.2885
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	64594065	64663238	13	-1.1066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	64669472	109430050	25640	-0.2781
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	109433747	109453982	40	0.4051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	109454229	126044974	10028	-0.2948
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	126045482	126046615	12	0.6152
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	126046876	126240280	139	-0.318
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	126241354	126277032	13	0.2216
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	126278361	142474939	10283	-0.2906
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	142476719	142486345	29	0.5894
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	142486495	143216852	463	-0.3239
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	143217246	143594788	119	-0.0619
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	143594903	143873952	252	-0.299
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	143896252	144066947	44	-0.9928
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	144074929	153147638	5575	-0.3177
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	153147645	153147712	2	-2.4763
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	153147715	153918878	530	-0.2946
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	153920121	153920301	3	-2.1947
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	153922854	154389895	331	-0.3356
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	154393171	154399613	4	-1.8796
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	7	154400830	159127004	3242	-0.3203
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	8	31254	5594267	6084	-0.2517
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	8	5598726	5603900	20	-2.2519
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	8	5603914	7978187	1929	-0.2238
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	8	7989963	7990294	3	-1.7018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	8	7997031	8385797	306	-0.1901
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	8	8386150	8386442	4	-1.9628
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	8	8388307	11949551	2929	-0.2228
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	8	11987726	12001123	6	-2.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	8	12034307	12232416	13	-0.1866
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	8	12233640	12247486	36	0.421
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	8	12260927	12269712	10	-0.8166
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	8	12275741	24974577	10473	-0.2178
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	8	24975500	24984333	23	-2.0654
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	8	24991104	39230659	9029	-0.2359
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	8	39235603	39386965	59	-2.0032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	8	39388299	39473123	58	-0.2078
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	8	39475210	39482278	6	0.6808
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	8	39485072	42189578	1957	-0.2404
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	8	42189719	42193542	4	0.7731
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	8	42199435	43388089	487	-0.1822
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	8	43388814	112291494	39541	0.9959
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	8	112294279	112295245	8	-1.2553
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	8	112295260	144290410	22287	1.011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	8	144295782	144310617	17	0.0529
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	8	144314377	146298155	634	1.0445
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	9	46587	21899355	19461	-0.3744
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	9	21900124	22011656	84	-2.9504
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	9	22015434	22492889	307	-0.3583
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	9	22501913	22502699	2	1.0629
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	9	22509340	23361805	578	-0.4009
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	9	23363115	23373484	8	-2.1475
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	9	23378488	32008079	6353	-0.3872
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	9	32011299	39330183	4457	0.0833
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	9	39330197	41480613	42	-0.2101
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	9	41484902	41846811	30	0.1968
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	9	41892866	41985187	7	1.0987
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	9	42023107	42065266	4	-1.3838
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	9	42065343	43166988	17	-0.0566
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	9	43169603	43790346	43	-1.3683
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	9	43800186	44266854	40	-0.2311
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	9	44272951	44629223	10	-1.1944
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	9	44727859	44866028	37	0.545
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	9	44873200	68183981	154	-0.0187
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	9	68186051	68186057	4	1.8666
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	9	68186059	69492991	125	0.1267
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	9	69492996	69696000	27	-0.4668
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	9	69807016	79554460	6402	0.072
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	9	79556881	79557273	2	-1.8828
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	9	79558228	138211368	40581	0.0762
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	9	138214105	138215622	2	-1.9625
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	9	138216412	141091394	1114	0.0486
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	10	72759	18173963	14858	-0.4896
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	10	18185123	18199813	3	-2.1728
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	10	18223647	24375263	4336	-0.4776
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	10	24377674	24378908	12	0.5432
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	10	24378951	96865301	44962	-0.4646
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	10	96869063	96869706	6	-2.1266
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	10	96875714	135506704	26727	-0.4822
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	11	198510	4967650	2469	-0.4129
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	11	4968117	4970367	8	0.2941
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	11	4972005	4973564	8	1.0243
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	11	4973581	4976814	23	0.3261
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	11	4976865	5782925	778	-0.4154
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	11	5782959	5819529	48	0.0784
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	11	5820561	6945451	842	-0.4231
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	11	6947761	6948775	4	-1.8319
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	11	6954728	25219111	13568	-0.3991
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	11	25219145	25221012	2	-2.1107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	11	25224253	55376498	16866	-0.3928
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	11	55376511	55442318	39	-1.8115
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	11	55444211	55445294	4	0.1291
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	11	55445945	55453009	7	-1.9598
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	11	55453576	89487949	19896	-0.3989
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	11	89492878	89550224	12	-1.7087
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	11	89567541	89803644	14	-0.2164
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	11	89807958	89818604	4	0.505
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	11	89832041	92934333	2283	-0.4262
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	11	92936162	92938484	3	-2.6821
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	11	92941753	115542265	15764	-0.4058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	11	115543439	115545356	2	-2.5925
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	11	115546160	131343517	11532	-0.4254
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	11	131344112	131344342	2	-2.7185
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	11	131347471	134944770	2836	-0.468
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	12	150442	2235889	1267	0.4649
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	12	2245862	2257920	41	-0.421
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	12	2258023	9630556	4896	0.4271
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	12	9633870	9713674	22	-1.3287
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	12	9714954	31257695	15255	0.4464
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	12	31261698	31409879	94	1.0265
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	12	31410284	34854498	2128	0.496
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	12	37857751	70388004	19715	-0.3911
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	12	70391927	70392420	3	-1.7208
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	12	70392585	95411491	15764	-0.3892
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	12	95416423	109629457	9718	0.0719
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	12	109630817	109631472	2	-1.7462
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	12	109634713	110764197	612	0.088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	12	110766748	121180994	7017	-0.3946
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	12	121181062	121181369	2	-2.2092
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	12	121181608	132120715	7881	-0.4319
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	12	132132584	132133335	13	-1.8071
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	12	132142331	133778189	572	-0.3825
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	13	19026949	32532727	9646	0.6322
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	13	32532860	32538408	15	-0.2579
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	13	32538423	36890183	3077	0.6353
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	13	36893785	36894375	2	-0.9344
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	13	36904296	38071135	823	0.6383
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	13	38072036	38084757	16	1.6186
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	13	38088330	53094799	9911	0.6419
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	13	53097984	53105785	3	-1.5344
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	13	53117879	54445723	847	0.6176
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	13	54445945	54471107	21	0.9478
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	13	54471824	54520067	34	0.5657
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	13	54521057	54522228	3	-0.5243
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	13	54526201	54785148	183	0.566
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	13	54786785	54818863	15	0.9124
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	13	54822089	115108397	39710	0.628
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	14	19002124	19602674	43	-0.3084
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	14	19604114	20422583	145	0.1755
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	14	20423372	70018047	31472	-0.3852
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	14	70018368	70022467	8	-2.5848
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	14	70022713	106530364	23417	-0.4147
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	14	106530687	106567100	17	0.7197
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	14	106569463	107152359	323	-0.2742
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	14	107153042	107184184	26	0.1498
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	14	107184376	107285437	67	-0.4216
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	15	20016328	20206939	48	-0.1677
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	15	20216955	20291313	11	-0.9786
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	15	20392821	20581564	46	-0.1158
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	15	20585988	20814977	49	0.191
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	15	20820067	26560192	2649	-0.3748
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	15	26562152	26563156	2	-3.9633
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	15	26563588	56789647	18730	-0.3874
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	15	56790703	56800977	25	-1.7673
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	15	56801623	57906706	680	-0.3846
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	15	57908316	57912847	7	-1.829
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	15	57916952	76878362	12045	-0.3992
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	15	76891241	76902179	23	0.7384
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	15	76902194	102469040	17652	-0.3923
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	16	60777	31965616	20052	0.778
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	16	31965881	32588622	109	0.471
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	16	32588901	32588909	5	-3.6835
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	16	32609274	34012168	227	0.4928
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	16	34197351	48967140	1650	-0.3735
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	16	48967277	48967687	2	-2.1848
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	16	48967734	70854381	14328	-0.3969
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	16	70855202	71196315	137	-0.0716
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	16	71201073	78371608	5233	-0.391
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	16	78372440	78384738	15	-1.5339
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	16	78384765	90287535	10619	-0.4212
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	17	526	945564	482	0.0846
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	17	950958	4145056	1766	-0.4057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	17	4146334	4199284	33	0.4534
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	17	4205297	4550242	169	0.784
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	17	4553299	5693515	583	0.0673
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	17	5696708	18317193	8391	-0.4015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	17	18317394	18369753	10	0.5219
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	17	18372250	18465221	21	0.1738
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	17	18469197	25271294	1554	-0.3618
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	17	25274376	26779053	774	0.0573
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	17	26781341	26782319	2	-1.5105
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	17	26789271	39407981	7160	0.0725
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	17	39413410	39430450	28	-0.3991
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	17	39430531	43574921	2160	0.0697
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	17	43586097	43648540	5	-1.0282
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	17	43655090	44214166	383	0.0642
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	17	44215364	44441482	96	0.4011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	17	44456008	44764994	39	0.7669
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	17	44784652	81049726	21608	0.0741
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	18	11543	2658677	1907	0.053
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	18	2666705	2702386	14	0.4964
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	18	2702759	38258727	20908	0.028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	18	38260420	38260470	4	-0.9323
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	18	38260480	38265389	15	-2.1059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	18	38268024	41974015	2363	0.0129
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	18	41974818	41978625	7	-1.1614
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	18	41982671	49628029	5438	0.0213
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	18	49630343	49630422	2	1.3763
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	18	49632433	55930550	4096	0.0056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	18	55930862	55935962	23	-0.6469
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	18	55938939	60878629	3513	0.0295
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	18	60879686	60879799	3	-1.3332
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	18	60880296	63727545	2060	0.0264
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	18	63727599	63728340	10	-0.6788
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	18	63732738	63906866	147	0.0455
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	18	63907434	63911589	10	-0.8199
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	18	63911876	78015057	10274	0.0378
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	19	90910	2550852	609	0.0723
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	19	2551470	2569045	10	-0.7723
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	19	2569242	12692001	4458	0.099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	19	12697366	12698102	2	-1.7625
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	19	12700523	35849322	11745	0.1058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	19	35849493	35861848	22	-0.734
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	19	35866744	38535008	1347	0.1019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	19	38540466	38557103	16	-0.526
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	19	38560210	59097854	11144	0.1038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	20	61305	1552503	1185	0.4475
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	20	1557190	1560562	16	-0.3035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	20	1560787	1582092	40	0.5761
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	20	1582207	1593893	6	1.5083
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	20	1597946	38034463	23211	0.4285
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	20	38038991	38042046	3	-1.0853
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	20	38046128	62956153	18035	0.42
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	21	10736871	14446712	130	0.4205
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	21	14452862	14538478	15	-0.1065
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	21	14538557	48096957	24270	0.4644
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	22	16052528	16657301	94	0.0642
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	22	16662742	16683416	2	1.6636
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	22	16864898	22468619	3204	0.1709
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	22	22473918	22474613	6	-2.5058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	22	22481498	22752462	341	0.199
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	22	22752680	22752880	4	-0.9908
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	22	22757321	25081338	1344	0.1749
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	22	25082115	25082534	3	-1.407
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	22	25087674	40793260	11233	0.165
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	22	40794590	40794820	2	-1.4091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	22	40797672	51234455	7330	0.1636
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	X	168477	155182354	84309	0.0428
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D05_895784	Y	2650438	59018259	8633	-1.2819
