Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	51598	394034	30	-0.1024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	524414	2005214	332	-1.2014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	2005684	5956787	2407	-1.8084
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	5957653	16885328	5939	-0.5887
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	16885372	17148828	110	-0.1264
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	17150527	25447294	5245	-0.5774
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	25455216	25519533	32	0.1171
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	25519573	34864261	4944	-0.5686
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	34875241	34875623	6	-2.989
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	34875729	34876414	5	-0.4958
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	34876451	34886855	10	-2.9241
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	34888129	34927482	38	-0.5565
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	34928653	34929235	2	-2.7268
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	34930303	54862788	10982	-0.5458
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	54865879	54866977	2	-2.7456
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	54869038	61886594	5423	-0.5261
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	61887539	61890775	2	-2.982
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	61892397	72541504	7288	-0.5086
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	72541524	72547722	8	-2.4231
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	72551668	72583736	37	-1.0599
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	72584492	75823432	1926	-0.5209
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	75827351	75827442	2	-3.1678
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	75832097	96231840	13458	-0.5241
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	96235295	96235305	2	-3.1949
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	96243496	103958859	4663	-0.5157
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	103959832	104069745	30	-1.3666
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	104104926	105814899	917	-0.5301
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	105820728	105823898	17	-2.241
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	105825578	108531282	1937	-0.5717
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	108535758	108539019	3	-2.1917
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	108540627	108567878	17	-0.6797
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	108570825	108618702	2	-2.6856
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	108630480	110029038	704	-0.5503
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	110034497	110041701	17	-1.4386
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	110044476	112491849	1954	-0.5684
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	112497488	112498899	24	0.0121
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	112498913	121057404	5180	-0.556
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	121137742	143607437	97	-0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	143607676	143614268	15	0.5048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	143615754	143954873	149	0.0316
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	143966611	147496467	1048	0.3713
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	147509287	147515336	17	0.8889
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	147515351	147557399	12	0.4044
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	147558223	147958370	44	0.0358
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	147959012	150822330	1477	0.3178
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	150822391	150853218	34	-1.0785
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	150857118	157133197	3832	0.3175
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	157135125	157136383	2	-1.9416
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	157141442	167483561	7718	0.3323
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	167500598	167508390	7	-1.8797
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	167509025	192714857	16741	0.3322
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	192718034	192721641	2	2.07
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	192723639	194287158	1026	0.3242
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	194291246	194291435	2	-1.5401
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	194293755	194855586	333	0.3709
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	194860749	194916735	37	-0.6161
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	194922366	208137685	8972	0.3222
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	208148236	208148688	2	-1.5282
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	208150607	241115363	23270	0.3359
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	241116497	241126397	38	-0.0348
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	1	241129224	247191011	3819	0.3387
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	2	2784	34538784	24116	0.3155
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	2	34544573	34594303	53	0.6964
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	2	34594531	35829477	872	0.2998
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	2	35831294	35841420	6	-1.5147
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	2	35841451	52617759	12183	0.3393
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	2	52617979	52634901	17	0.9943
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	2	52634916	57248406	3357	0.3453
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	2	57255548	57295427	68	0.8797
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	2	57298975	58026120	465	0.3813
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	2	58026627	58029824	2	-0.9843
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	2	58035043	146581053	49755	0.3164
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	2	146581549	146594276	20	1.0624
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	2	146594865	151462149	2746	0.3506
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	2	151463224	151917519	357	-0.5704
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	2	151918246	161161603	5657	0.3423
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	2	161163055	161168750	9	-0.6178
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	2	161169198	161261126	57	0.3195
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	2	161261487	161261577	2	-2.896
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	2	161265302	163113129	1041	0.34
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	2	163118595	163293558	100	-0.5447
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	2	163302860	164345098	626	0.3419
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	2	164351734	164353372	5	-0.8003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	2	164354888	208063200	26383	0.3593
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	2	208063423	208067581	16	-3.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	2	208067721	225190380	11109	0.3624
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	2	225196662	225730796	370	2.4723
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	2	225734069	242738129	10622	-0.6083
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	35345	6621543	5847	0.3567
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	6626128	6628222	21	-0.5267
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	6628244	26872671	14458	0.367
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	26873037	26877475	2	-1.051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	26878215	27350421	258	0.4439
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	27353234	27354711	2	-0.5694
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	27357218	27647549	158	0.3876
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	27654287	68801908	27053	-0.5331
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	68803145	68830103	23	-1.1849
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	68831448	75503860	4866	-0.5383
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	75509797	75627862	51	-2.9313
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	75628512	75651239	10	-0.7724
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	75655239	75703585	12	-2.0558
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	75721431	75785177	18	-0.395
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	75791991	100427201	10993	0.3504
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	100427237	100432111	35	-0.07
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	100433654	131275142	18773	0.3654
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	131275157	131282287	22	-0.4784
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	131282357	164022703	20304	0.3703
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	164023167	164023184	2	2.7419
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	164028410	174719597	6415	0.3708
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	174723329	174772374	24	0.936
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	174782887	192679475	11601	0.358
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	192681431	192681677	2	-1.7145
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	192681754	193530801	610	0.3135
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	193534791	193571872	38	-0.5035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	193573318	194360656	552	0.3327
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	194360739	194361700	5	1.3323
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	194363167	196667429	1478	0.3632
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	196675858	196676587	2	-1.2799
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	196722113	196916044	36	0.4675
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	196916079	196960434	31	0.8879
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	196964365	197263495	122	0.3777
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	197267976	198346412	535	-0.0079
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	3	198349604	199380515	516	0.37
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	2281	5361657	2609	-0.037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	5366335	5374196	5	-1.246
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	5375100	9819488	3188	-0.0246
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	9823258	9840347	28	2.4895
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	9840596	9844366	8	0.621
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	9845240	9999813	171	-0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	10001452	10009766	16	-0.8716
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	10011816	24157734	10282	0.0048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	24161356	24167864	10	-0.5695
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	24172799	48962605	15532	-0.0158
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	48985949	48986112	2	-1.9515
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	48991977	68943659	10494	-0.0281
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	68964800	69168574	81	0.4631
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	69171930	83049406	8217	0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	83049980	86871587	2385	-0.539
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	86874152	87023934	111	-0.0078
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	87028655	87090635	47	-0.4511
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	87095439	91965607	2995	0.0253
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	91966479	92560126	382	-1.3143
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	92561909	101395601	5094	0.0151
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	101395694	101399717	2	-2.4068
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	101400855	103079411	1064	-0.0065
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	103081095	103235467	106	-1.4706
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	103239827	103357000	78	0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	103357249	115401624	7261	-0.5102
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	115403678	115403701	2	1.2529
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	115403715	153209736	22315	-0.5061
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	153210343	153213640	6	-1.8368
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	153215732	163493515	6604	-0.5043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	163493726	163785175	219	-1.3951
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	163785319	181215288	10921	-0.5303
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	181217688	181290757	40	-1.4387
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	181292610	181294234	4	-3.1648
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	181294314	181488306	187	-1.4389
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	181491494	190747950	6676	-0.5623
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	190750598	190922957	64	-0.2164
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	190923028	191195137	131	-0.6194
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	4	191204243	191261904	6	0.0453
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	5	68532	49477715	30836	0.6216
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	5	49483063	49881563	140	-0.5596
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	5	49886207	50095324	89	2.6042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	5	50095694	61197871	7430	-0.5248
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	5	61197909	61199622	3	-4.1623
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	5	61200656	154576460	57021	-0.533
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	5	154578102	154579140	3	-2.7086
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	5	154581750	154581940	2	-7.4436
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	5	154587244	165241947	7106	-0.5416
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	5	165249609	165377884	103	2.6301
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	5	165380206	166158060	599	-0.5962
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	5	166158612	166223866	48	-4.4971
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	5	166227887	169301496	2416	-0.6238
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	5	169303098	170071237	673	2.3356
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	5	170071394	177717302	4727	0.3341
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	5	177717741	177719867	2	-1.5631
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	5	177721808	178223729	348	0.2823
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	5	178224085	178238609	7	-0.1994
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	5	178238959	179018709	490	0.3172
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	5	179018851	179040803	26	-0.0469
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	5	179040854	180722926	906	0.3229
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	94661	199283	101	0.7943
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	202353	330687	108	0.4048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	330784	9103624	7198	0.8273
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	9119775	9122876	2	-1.042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	9141797	10584515	925	0.8589
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	10586428	10587011	7	0.1116
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	10589893	26845011	11951	0.8239
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	26845417	26850473	8	1.5789
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	26860015	26891646	19	1.0155
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	26906134	26921069	11	0.402
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	26926947	26948859	12	1.0608
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	26951873	26957310	4	-0.157
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	26959777	29945456	1413	0.8027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	29945503	29982688	18	0.011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	29982787	30026566	29	0.7357
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	30029053	30029202	3	-0.6744
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	30034440	31388802	635	0.8087
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	31394255	31403932	8	2.1711
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	31403966	32562501	514	0.893
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	32564661	32678343	30	2.2774
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	32681749	54039234	13784	0.8455
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	54039339	54039814	4	3.3413
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	54043307	57416954	2014	0.884
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	57417618	57630824	78	0.0302
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	57637265	58190910	234	-0.4208
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	58248259	58882675	251	0.7845
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	61944399	65393663	1776	-0.5559
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	65404265	65407497	3	-3.0446
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	65407534	74648586	6149	-0.5101
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	74648953	74658138	10	0.5555
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	74660283	77493251	1764	-0.5002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	77496587	77509408	20	0.0818
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	77509476	81341478	2525	-0.5331
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	81341677	81346253	27	-2.9905
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	81351060	116004051	21560	-0.5333
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	116008970	116040722	32	-4.2059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	116044104	160084529	28714	-0.5332
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	160090044	160094446	3	-2.4358
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	6	160095326	170892930	7876	-0.6176
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	52911	22401305	16101	0.6097
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	22401997	22403012	2	-2.9863
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	22405279	24001652	1077	0.6082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	24006403	24006908	2	2.1183
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	24007342	38257218	10254	0.6126
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	38257239	38269669	7	1.8165
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	38269959	49612925	7619	0.6125
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	49615514	49620160	3	-1.128
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	49621975	53284323	2752	0.5806
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	53285881	53286279	2	-1.941
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	53289177	54353999	755	0.577
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	54354003	54354011	5	2.1894
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	54360982	56728994	1572	0.5419
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	56729607	56736308	3	-2.4523
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	56739660	64206287	1564	0.511
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	64231500	64233133	6	-0.9009
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	64274563	100167180	20308	0.6123
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	100167201	100170778	2	-1.0076
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	100188941	108456791	4856	0.6399
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	108457436	108459233	2	-0.4232
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	108459569	109221034	487	0.8551
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	109224328	109228448	24	-0.3549
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	109228480	109241146	11	-1.799
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	109241218	115721936	3899	0.8558
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	115722247	115728293	3	-2.2725
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	115728547	133435717	10849	0.8495
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	133435735	133449083	33	-1.6564
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	133449098	141409593	5204	0.8472
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	141416112	141438576	42	-1.7098
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	141441750	142154515	450	0.8824
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	142156294	142159241	7	-3.2893
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	142159298	142165614	20	-1.2153
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	142165684	149916037	4740	0.9138
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	149916734	149932502	8	-0.4883
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	149938855	152778571	1717	0.9756
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	152778578	152778645	2	-2.4333
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	152778648	154020828	864	0.9413
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	154024104	154030546	4	-2.0143
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	7	154031763	158819765	3244	0.9453
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	8	21254	6144719	6908	-0.093
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	8	6145599	6161276	27	-1.2417
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	8	6162295	7225429	918	-0.0542
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	8	7237790	7847316	151	-0.7091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	8	7864332	11986960	3292	-0.0346
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	8	12025135	12038532	6	-1.2382
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	8	12071716	12291857	49	0.0984
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	8	12305298	12487426	63	-0.3498
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	8	12517914	18893788	5858	-0.0245
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	8	18895819	18903101	28	-1.5091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	8	18910428	25028104	4536	0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	8	25030360	25040140	25	0.632
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	8	25040167	26566208	1158	-0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	8	26566696	26566709	2	-1.8979
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	8	26571375	39365832	7879	-0.0324
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	8	39366268	39503281	53	-0.6588
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	8	39503857	85420544	25889	-0.0314
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	8	85425438	85431221	19	-1.247
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	8	85433237	90390828	2755	0.0089
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	8	90390998	90392844	3	1.1496
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	8	90392880	112364214	13376	-0.0054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	8	112364257	112364421	3	-2.0228
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	8	112364436	115701219	1823	-0.0366
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	8	115703663	115710907	35	-1.8214
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	8	115719873	126966068	7684	0.0018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	8	126966093	127313091	219	-0.5151
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	8	127317560	146268959	13166	-0.0116
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	9	36587	2137099	2315	-0.5744
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	9	2138837	2140662	6	-5.255
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	9	2142115	21967194	17152	-0.5245
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	9	21968443	21983964	10	-4.3383
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	9	21986996	29081097	5263	-0.5305
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	9	29084549	29084997	2	-2.8119
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	9	29087680	67673801	6831	-0.5353
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	9	67675871	67678367	8	1.2213
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	9	67699736	75210678	3916	-0.5219
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	9	75212929	75216486	3	-2.8471
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	9	75218543	75446932	144	-0.5468
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	9	75447812	75454043	15	-4.7323
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	9	75454138	91719210	11637	-0.5611
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	9	91719255	91783976	84	-4.8895
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	9	91788440	140211215	32317	-0.5594
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	10	62759	1550338	938	-0.5888
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	10	1550743	1550898	2	-4.0244
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	10	1551211	6433616	4444	-0.6575
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	10	6438984	6459564	28	-0.002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	10	6459579	24417681	13772	-0.5947
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	10	24417682	24418060	9	-2.43
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	10	24418914	31286516	5031	-0.5691
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	10	31291340	31291744	10	-2.1192
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	10	31291785	46514650	7370	-0.5754
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	10	46516236	46519875	5	-3.9085
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	10	46520662	68381804	14098	-0.5301
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	10	68381908	68382167	3	-3.0907
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	10	68382430	90932947	14740	-0.5485
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	10	90933076	90933716	6	-3.0174
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	10	90937793	91812455	661	-0.5267
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	10	91812918	91814824	3	-2.8843
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	10	91818981	135356694	29709	-0.5549
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	11	188510	4925086	2476	-0.0581
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	11	4926819	4932848	29	0.8205
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	11	4932910	22426056	13290	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	11	22428177	22429334	4	-1.7944
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	11	22429718	22489898	54	-0.0781
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	11	22490013	22490129	2	-1.8138
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	11	22492885	24735035	1591	-0.0187
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	11	24735537	25238101	361	-1.3746
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	11	25238832	71571697	25465	-0.0138
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	11	71578612	71579318	2	-1.7498
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	11	71585202	78333901	3657	-0.0389
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	11	78339146	79382918	844	-1.6213
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	11	79383001	79398887	17	-2.8362
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	11	79398986	86720899	5142	-1.405
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	11	86727079	92573981	3927	-0.0406
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	11	92575810	92578132	3	-1.6698
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	11	92581401	92761082	95	0.0564
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	11	92762699	101548724	6498	-1.4298
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	11	101549857	101550853	2	-7.5751
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	11	101554431	108343977	4446	-1.4073
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	11	108344120	108353377	10	-3.7733
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	11	108354139	112613597	2744	-1.4603
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	11	112614672	112619107	5	-5.2536
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	11	112620082	114953025	1657	-1.4897
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	11	114954500	114957892	4	-5.7903
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	11	114957930	125315781	7235	-1.5285
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	11	125316889	125330918	19	-3.5047
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	11	125332163	126624738	1028	-1.5265
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	11	126625338	134449982	6022	-0.0389
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	20703	9521823	6205	0.3298
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	9525137	9619559	24	-1.1886
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	9626236	11105412	1040	0.345
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	11106639	11152602	19	0.9685
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	11158098	36144018	16417	0.3536
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	36144211	39914669	2083	-0.0223
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	39914769	41420845	1056	2.5084
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	41423355	42183157	501	-3e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	42183823	43257863	639	2.5492
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	43268257	44186092	543	-0.0338
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	44190705	44195804	4	1.787
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	44199559	49105413	2678	-0.0417
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	49109203	49276485	70	2.4099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	49284133	49718771	234	2.8826
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	49722220	51439675	1216	2.3859
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	51441612	51709772	187	-0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	51712666	51731192	9	2.1539
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	51735819	59158871	4299	-0.0321
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	59160866	59162486	4	-1.9709
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	59162559	89015818	18577	-0.0119
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	89015947	89016205	5	-1.7546
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	89017688	98032938	6281	-0.0123
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	98033177	98033483	2	-1.8393
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	98036969	98494394	316	0.0245
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	98495692	98619079	79	-0.5022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	98619498	110657591	7717	-0.0229
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	110665454	110806134	55	0.6796
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	110807360	112497668	1056	-0.013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	112502694	112724818	192	-0.6396
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	112727018	112821554	81	-0.06
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	112824376	112892540	72	0.2891
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	112892659	113477719	543	0.5928
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	113478017	114076407	432	0.292
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	114079282	125170710	6967	-0.0472
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	125171704	125365094	160	-4.8092
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	125365112	125398295	68	-2.8429
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	125398358	126093023	589	-4.8538
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	126095039	129761432	3289	-0.1342
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	129764581	130391312	442	-0.6463
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	130391644	130391708	2	-4.9456
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	12	130399163	132288262	876	-0.5584
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	13	17924949	19019459	567	0.2665
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	13	19021895	19021910	2	-1.5349
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	13	19022501	19718781	338	0.3379
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	13	19725251	19725940	2	-1.6705
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	13	19730547	99182104	52500	0.3417
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	13	99182767	99187733	4	-0.9694
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	13	99187874	107094624	6314	0.3245
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	13	107095551	107144549	62	-0.0517
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	13	107148838	114126499	4512	0.3043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	14	18072124	18866184	60	0.2691
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	14	18871755	19044849	11	-0.2489
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	14	19045977	19362031	49	0.3618
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	14	19362245	19362968	3	1.4774
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	14	19369414	21464245	1435	0.3787
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	14	21464288	21466311	8	0.0391
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	14	21466459	25853753	2999	0.408
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	14	25853754	25853758	5	-0.8219
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	14	25854753	28793480	1683	0.3649
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	14	28797605	28798105	2	-1.292
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	14	28801413	46720123	11098	0.3754
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	14	46724284	47113681	256	-0.0284
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	14	47116938	73090732	16743	0.3558
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	14	73099653	73099668	2	1.8576
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	14	73100484	98502860	17384	0.3357
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	14	98503129	98505176	5	0.7218
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	14	98510627	105618359	3437	0.3285
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	14	105618552	105632486	9	1.8611
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	14	105638145	105834705	95	0.4648
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	14	105835970	105934566	41	0.1612
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	14	105934569	105981325	36	0.6723
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	14	105981640	106356482	245	0.3083
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	15	18276341	30644704	6326	0.2899
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	15	30644774	30647150	2	-1.3391
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	15	30664123	59471497	18899	0.3437
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	15	59475461	59485246	15	-0.602
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	15	59485259	74678296	9113	0.3222
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	15	74678566	74679059	6	-2.791
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	15	74679081	74682830	15	-1.5344
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	15	74689234	90566759	10238	0.3324
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	15	90566878	90567298	3	-0.9181
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	15	90567762	100286563	7442	0.3315
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	16	777	19851864	13525	0.2999
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	16	19853151	19877755	30	-0.3825
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	16	19877991	22331669	1287	0.3208
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	16	22335863	22611363	76	0.012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	16	22612021	23370806	506	-0.6217
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	16	23380054	32117600	4678	0.2741
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	16	32151974	33550900	229	-0.1571
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	16	33551523	34609765	378	0.2205
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	16	34612229	35140727	137	-0.5992
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	16	45021283	54352715	6474	0.3383
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	16	54353890	54387091	24	-0.368
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	16	54399855	88815036	25166	0.3385
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	17	526	10252751	6065	-0.0609
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	17	10253205	10254416	2	-2.1372
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	17	10256197	43512851	18321	-0.0523
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	17	43512893	53042488	6290	0.3238
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	17	53043332	53043992	2	-1.5315
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	17	53046992	78643088	14598	0.3188
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	18	1543	40376042	25321	-0.0133
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	18	40376055	40379449	2	-2.0952
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	18	40385321	42188122	1231	-0.011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	18	42189963	42712102	367	-0.5851
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	18	42713630	62301276	13779	-0.0269
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	18	62303651	62303670	2	-3.294
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	18	62304498	64636529	1691	-0.0118
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	18	64636730	64640767	2	-1.863
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	18	64642563	64897086	190	-0.0992
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	18	64897224	64904306	37	-3.2094
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	18	64908676	64909246	9	-0.731
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	18	64909563	65358832	352	-0.0726
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	18	65359372	65368251	7	-5.0529
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	18	65368522	75504076	7491	-0.0627
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	18	75506719	75507191	3	-1.9655
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	18	75511595	76116029	314	-0.07
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	19	41910	5457659	1599	-0.0866
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	19	5461239	5461580	2	-3.119
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	19	5461653	14614608	4289	-0.1077
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	19	14615259	14618402	2	1.6861
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	19	14619000	19721495	2674	-0.1143
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	19	19722682	19724631	2	-2.2518
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	19	19730344	40541162	8246	-0.0807
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	19	40541333	40553688	22	-0.7461
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	19	40558584	53223124	6342	-0.0924
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	19	53223142	53223144	2	-2.0179
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	19	53223188	56823625	1766	-0.0833
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	19	56834164	56840009	11	-1.1396
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	19	56846717	60974181	2529	-0.0946
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	19	60974347	60974879	3	-2.269
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	19	60978105	63789666	1849	-0.1054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	20	9305	1500503	1185	0.3536
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	20	1505190	1508951	20	-0.3572
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	20	1508999	1547002	46	0.7519
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	20	1547061	6919610	3996	0.3269
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	20	6926096	8553661	1243	-0.5119
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	20	8559534	26253579	13565	0.344
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	20	28034013	28107514	20	-0.2704
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	20	28111932	62386012	22415	0.306
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	20	62386512	62426597	6	-0.2946
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	21	9758742	22573005	6467	0.3208
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	21	22577771	22586529	9	-0.4237
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	21	22588870	43792481	16168	0.3117
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	21	43795301	43797240	2	-2.6987
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	21	43798095	46921385	1766	0.3172
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	22	14432528	19902214	2855	0.3147
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	22	19925029	19941349	4	-1.4696
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	22	20038030	21082462	788	0.3453
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	22	21082680	21082880	4	-0.9119
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	22	21087321	23411338	1344	0.3419
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	22	23412115	23417674	4	-1.0278
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	22	23417688	49581321	18563	0.3064
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	X	108477	80981785	42247	-0.0054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	X	80990164	81422895	229	0.9173
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	X	81425983	115047709	18196	0.0089
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	X	115051983	115064666	7	-1.2458
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	X	115070447	142467121	16228	0.0171
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	X	142467226	142467904	2	-3.5998
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	X	142469566	154835548	7500	-0.012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	Y	2710438	6161425	838	-2.5261
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	Y	6167901	6356423	85	-3.4768
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	Y	6359046	14099670	2615	-2.8449
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	Y	14099736	14103917	3	-7.598
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	Y	14104283	17543090	1821	-2.8406
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	Y	17543786	19484001	929	-3.1845
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	Y	19484450	22391165	1118	-2.8778
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	Y	22392047	24625839	478	-3.1929
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	Y	24627620	24919963	81	-2.4944
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	Y	24920187	25649572	89	-3.5582
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	Y	25664067	25938472	40	-2.336
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	Y	25944418	26009711	21	-3.3449
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	Y	26011215	26129939	37	-2.3398
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	Y	26130472	26861404	258	-3.3025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D09_895692	Y	26866725	57427647	176	-2.3765
