Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	51598	1637750	233	0.0296
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	1639922	1662463	10	-0.6426
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	1677447	16022502	8171	0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	16026084	16026512	6	-2.0589
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	16026788	25325882	5653	-4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	25328112	25328122	2	-1.4976
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	25328479	72522436	28870	0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	72522941	72582430	54	0.3966
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	72583526	103904311	20068	0.0093
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	103904580	103931691	19	0.5863
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	103933882	104023054	14	-0.0859
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	104023154	104060967	19	-0.5758
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	104061555	108567878	2901	0.0151
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	108570825	108618702	2	-2.6892
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	108630480	110034497	705	0.0267
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	110034560	110041701	16	-1.3393
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	110044476	111179091	844	0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	111179093	111181096	14	-0.9471
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	111181273	111189749	22	-0.3286
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	111193590	150822330	9146	0.0126
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	150822391	150857118	35	-1.0837
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	150857189	151026302	170	0.0112
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	151028547	151035324	37	-1.4513
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	151040529	195079130	29634	0.0111
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	195079153	195082414	2	-2.7374
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	195083353	220433291	17437	0.0016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	220441457	220443627	2	1.459
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	220448757	246863836	18366	0.0048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	246875487	246875732	2	-1.4547
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	1	246875992	247191011	141	0.1404
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	2	2784	4183562	2990	7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	2	4191739	4201894	42	-0.6683
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	2	4207937	9094655	4010	0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	2	9102763	9102827	2	-1.8232
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	2	9105939	38807999	20307	0.0086
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	2	38809370	38825785	8	0.9317
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	2	38826330	52607972	9840	0.0094
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	2	52607984	52634901	34	0.6352
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	2	52634916	76695822	15561	0.0064
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	2	76697974	76698934	6	-0.9114
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	2	76701094	78555584	1221	0.0218
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	2	78561275	78562392	5	-0.8202
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	2	78566447	86791198	5148	0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	2	86806581	86807365	2	1.8924
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	2	86823917	106246527	7733	0.0015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	2	106247145	106251789	11	-2.6025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	2	106253687	114078485	3843	0.0104
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	2	114078884	114097291	3	-1.1924
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	2	114100022	123597686	6027	0.0056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	2	123600408	123607529	6	-0.9251
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	2	123609169	129354972	3579	0.0131
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	2	129355244	129356767	12	-0.9152
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	2	129356785	242738129	69621	0.0053
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	3	35345	884038	707	-0.0066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	3	884735	919436	23	-1.1193
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	3	922488	47453513	32827	0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	3	47466826	47467724	2	-2.9521
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	3	47472218	61165434	8457	0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	3	61180878	61216730	28	0.6086
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	3	61218651	68828854	5814	-0.0056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	3	68828949	68830103	14	-1.3364
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	3	68831448	100427989	15969	0.0085
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	3	100428085	100432004	23	-0.6115
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	3	100432111	131246388	18745	4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	3	131249276	131288926	51	-1.1792
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	3	131289614	190843448	37032	0.0121
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	3	190846372	190853682	12	-0.8528
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	3	190853708	194356398	2494	0.0048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	3	194357441	194365597	21	-1.2373
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	3	194369129	196903444	1494	0.0028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	3	196907469	196941179	22	0.5512
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	3	196941532	199322834	1170	0.0484
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	3	199322975	199380515	21	-0.4024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	2281	3569248	1511	0.0135
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	3569667	3571982	2	-1.9259
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	3579188	9066075	3736	-0.0065
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	9070328	9088443	9	-0.8525
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	9095185	9819488	545	-0.0053
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	9823258	9840347	28	2.2744
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	9840596	34455357	16991	0.0036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	34455370	34511957	51	0.6063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	34515387	61009907	14679	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	61012589	61014212	2	1.7161
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	61018159	63350429	1339	0.0195
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	63352531	63354257	8	-2.0155
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	63362225	68943659	3444	0.0147
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	68964800	68977394	6	0.8208
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	68987534	69054598	11	-0.202
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	69057536	69168574	64	-1.7374
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	69171930	69475459	12	-0.0354
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	69477123	69512426	3	1.9146
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	69571393	70165498	322	0.0067
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	70165935	70278670	58	-0.5327
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	70281510	77504857	4257	0.0136
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	77508810	77511390	5	-1.0527
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	77511825	115393149	23078	0.0043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	115394772	115401624	23	-1.5009
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	115403678	161272224	27404	0.0097
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	161273041	161282435	17	-0.6324
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	161282544	161282985	3	-1.3932
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	161283008	161290239	19	-0.6596
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	161303320	161927166	449	0.0203
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	161931900	162086865	125	-0.9717
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	162087526	172605921	6712	0.0123
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	172611459	172614351	12	0.7874
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	172616946	173658847	634	-0.0028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	173658862	173665218	13	0.6944
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	173677707	190779808	11699	0.0144
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	190779872	190889406	41	-0.3576
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	4	190896136	191261904	148	-0.0223
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	5	68532	12844720	10220	-3e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	5	12853889	12891533	15	0.6624
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	5	12902201	21412601	5490	0.0053
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	5	21413596	21413610	2	-2.3365
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	5	21421823	53177096	17281	0.0088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	5	53179023	53179916	3	-1.5773
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	5	53189414	57364872	2888	0.0063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	5	57365287	57369050	26	-0.5583
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	5	57369272	68882059	7304	0.0017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	5	68903050	69153891	5	-1.4651
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	5	69269183	70290661	11	0.0865
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	5	70290662	70343300	6	1.1562
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	5	70384949	76107722	3687	0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	5	76108019	76170533	33	0.3006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	5	76171566	78143664	1229	-0.0061
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	5	78145747	78146927	3	-1.179
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	5	78151267	81454519	1943	-0.0031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	5	81455034	81463238	3	-2.8833
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	5	81463794	81487068	8	-0.6929
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	5	81487284	95261272	7589	0.0133
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	5	95262171	95262223	2	-1.8063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	5	95262941	137751947	27170	0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	5	137757588	137762780	2	-1.5987
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	5	137763602	177131055	26169	0.0036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	5	177160157	177165211	3	2.4018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	5	177187571	180307129	1813	0.0166
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	5	180311316	180375006	22	0.7131
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	5	180375047	180722926	168	0.1207
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	6	94661	10986357	8609	5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	6	10986873	10987542	2	-1.4042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	6	10988158	23850996	9630	0.0048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	6	23852651	23853409	2	-2.4501
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	6	23855711	29945051	3505	0.0061
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	6	29945166	29958359	20	1.2569
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	6	29979615	32557501	1188	0.0844
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	6	32560779	32734596	67	-0.5904
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	6	32758590	32798005	45	0.069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	6	32798775	32798808	3	2.2082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	6	32798923	54039110	13699	0.0054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	6	54039189	54039814	6	-1.0492
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	6	54043307	54953644	603	0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	6	54956414	54957149	2	-1.9734
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	6	54958098	65393663	3748	0.0196
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	6	65404265	65405713	2	-2.4754
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	6	65407497	77071668	7643	0.0164
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	6	77073620	77073646	3	1.6298
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	6	77073713	79019608	1294	0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	6	79025784	79095953	113	-0.5925
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	6	79098352	103841522	15486	0.0109
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	6	103844669	103872163	47	0.8163
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	6	103872363	165218806	40285	0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	6	165219292	165229446	2	-1.8679
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	6	165229518	170892930	3947	0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	7	52911	240268	91	0.0522
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	7	243383	253709	11	-0.8363
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	7	256525	9071553	5270	0.0165
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	7	9072097	9080923	5	-1.2994
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	7	9083942	19475583	8497	0.018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	7	19476040	19495525	30	0.5558
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	7	19498740	71839801	32098	0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	7	71844371	71901716	26	-0.9053
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	7	71903709	125832210	31417	0.0107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	7	125832718	125834112	13	1.0788
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	7	125834113	133440537	4729	0.0048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	7	133440551	133446174	4	-1.0994
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	7	133446205	135147210	1220	-0.0076
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	7	135147764	135147941	3	1.1657
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	7	135148090	141407299	3985	0.0159
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	7	141408343	141444033	47	0.2697
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	7	141445459	142154515	448	0.0076
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	7	142156294	142159298	8	-3.417
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	7	142159383	142165614	19	-1.6484
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	7	142165684	142928980	470	0.0258
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	7	142929090	143039363	33	0.7777
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	7	143056311	143058704	13	-0.0952
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	7	143058719	143205714	58	0.601
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	7	143206916	143540378	268	-0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	7	143542557	143697880	39	-0.4917
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	7	143705862	158819765	9691	-0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	8	21254	7181231	7829	9e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	8	7202021	7225429	24	-0.6383
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	8	7237790	7783778	114	0.1037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	8	7784544	7785109	2	-2.1909
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	8	7789458	146268959	87966	0.0032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	9	36587	41975187	31349	0.0108
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	9	42013107	42055266	4	-1.6345
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	9	42055343	44569219	110	6e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	9	44667855	44795733	36	0.5166
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	9	44806024	67673801	154	-0.0745
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	9	67675871	67675876	3	2.4013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	9	67675877	89712414	14469	0.0032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	9	89743971	89744039	2	-2.0467
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	9	89747777	140211215	33783	0.0063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	10	62759	48522382	32236	0.0061
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	10	48548797	48578525	5	-0.8274
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	10	48651181	49472874	358	0.0122
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	10	49475374	49476175	3	-1.4015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	10	49477637	66953884	12097	0.0096
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	10	66953917	67006388	71	0.3394
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	10	67006494	94088558	17932	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	10	94093847	94099771	4	-1.0212
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	10	94102136	123422178	19750	0
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	10	123422642	123450896	47	-0.814
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	10	123451644	124333941	646	-0.0034
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	10	124334099	124347716	8	-0.9447
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	10	124373003	135356694	7920	0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	11	188510	4924226	2476	0.0152
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	11	4924693	4933483	43	0.612
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	11	4933587	5739688	779	0.014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	11	5739971	5765914	37	0.3678
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	11	5766037	18896898	9421	0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	11	18897432	18918939	62	0.3216
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	11	18927281	50952948	21449	0.0062
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	11	50983318	50983680	2	-2.0193
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	11	51019825	51421003	144	0.1007
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	11	54458221	54514867	4	1.5822
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	11	54530469	55132856	244	0.0777
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	11	55133074	55209585	51	0.4849
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	11	55210152	91662133	21551	0.0117
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	11	91664434	91667547	6	-0.9949
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	11	91667801	106735929	10908	0.0083
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	11	106743866	106744338	7	-2.0291
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	11	106757572	134449982	19953	-6e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	12	20703	2105437	1265	0.0546
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	12	2105889	2128181	43	-0.7198
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	12	2128284	7886054	4064	0.0127
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	12	7895692	8015167	60	0.7524
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	12	8022225	25537446	11824	0.0089
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	12	25540454	25545712	9	-1.1006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	12	25546789	73619048	29209	0.0106
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	12	73620979	73626443	5	-1.318
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	12	73633337	130686668	37985	9e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	12	130698537	130699288	13	0.6175
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	12	130708284	132288262	572	0.0707
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	13	17924949	22527187	2892	0.0045
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	13	22527210	22531515	13	-2.1861
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	13	22536195	26863544	3300	0.0067
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	13	26865563	27009794	120	0.569
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	13	27011019	36969135	7236	0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	13	36970036	36982757	16	0.7927
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	13	36986330	114126499	50713	0.0136
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	14	18072124	85521664	42621	0.0066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	14	85530379	85540738	17	-3.3027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	14	85541877	85547875	5	-7.955
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	14	85550452	85558194	16	-4.0837
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	14	85559964	98733600	9323	0.0074
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	14	98734737	98736153	3	-1.3726
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	14	98737440	105598011	3176	-0.0092
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	14	105601409	105618359	8	-0.8238
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	14	105618552	105632486	9	-2.9275
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	14	105638145	106005329	200	0.1226
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	14	106005593	106014879	4	-0.8103
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	14	106019613	106216317	116	0.0371
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	14	106216609	106250892	29	0.49
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	14	106255229	106356482	68	0.0245
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	15	18276341	22220838	1427	-0.0263
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	15	22225844	22269689	40	-0.5669
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	15	22276386	32501415	6351	0.0065
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	15	32507087	32643110	73	-0.7036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	15	32645302	74678296	26463	-0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	15	74678566	74682830	21	1.0673
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	15	74689234	100286563	17682	0.0062
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	16	777	54354095	27321	0.015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	16	54355723	54366725	9	1.2493
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	16	54366967	76929109	14519	0.0043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	16	76929941	76940641	15	-2.6469
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	16	76942239	88815036	10640	0.0186
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	17	526	41707706	23620	0.0115
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	17	41708649	42107479	53	0.7483
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	17	42120174	74767849	19872	0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	17	74768477	74768508	2	1.3372
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	17	74768718	76243458	774	0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	17	76244388	76248774	2	1.0466
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	17	76248895	78643088	963	0.0207
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	18	1543	7724016	5563	0.0142
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	18	7724378	7730223	3	-1.1526
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	18	7730473	15148341	4841	1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	18	15160292	15165018	2	-1.6052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	18	15167772	18153909	663	0.0155
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	18	18154324	18154460	2	-1.9597
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	18	18154585	76116029	39733	0.005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	19	41910	20538030	9079	0.0296
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	19	20550917	20551698	2	-1.852
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	19	20556970	24220083	2146	0.0171
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	19	24222133	24225037	3	-1.176
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	19	24228488	59414087	15490	0.0163
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	19	59422014	59445152	18	1.0285
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	19	59445289	60974181	762	0.0511
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	19	60974347	60974879	3	1.3601
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	19	60978105	63789666	1849	0.0336
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	20	9305	1508999	1206	0.0289
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	20	1509580	1541893	41	-1.2511
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	20	1545946	5453135	2852	0.0193
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	20	5453764	5692029	148	0.2496
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	20	5692455	62426597	38242	0.0056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	21	9758742	46921385	24414	0.0096
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	22	14432528	20637519	3088	0.0196
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	22	20645089	20688231	49	-0.8183
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	22	20690650	20697697	6	-2.0128
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	22	20701638	20843520	256	-0.8235
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	22	20843579	20864324	31	-1.3169
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	22	20864576	20903987	89	-0.8793
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	22	20909341	22601745	1068	0.0154
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	22	22613016	22662933	30	-0.4863
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	22	22667307	49581321	18940	0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	X	108477	103140431	54317	0.0091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	X	103144645	103155199	18	0.9728
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	X	103156809	103157510	7	0.2509
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	X	103157590	103191929	32	0.9603
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	X	103191966	134581585	17604	0.005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	X	134585148	134629972	31	1.0791
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	X	134635057	154835548	12483	0.0065
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	Y	2710438	13001118	3020	-0.9388
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	Y	13001601	13008436	5	-1.9307
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	Y	13009104	14670324	755	-0.8917
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	Y	14670699	14671164	2	-2.4593
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	Y	14673299	15886848	659	-0.9176
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	Y	15891480	15892558	3	-2.4529
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	Y	15892769	21252064	2468	-0.9198
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	Y	21252990	21254208	3	-2.4278
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D11_895706	Y	21255804	57427647	1673	-0.9185
