Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	51598	15362225	7992	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	15362244	15362449	4	0.9369
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	15362518	16884097	780	-0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	16884147	16889459	14	-0.3825
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	16889467	16920992	18	0.4337
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	16921066	30504109	7783	0.0091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	30504164	30504285	2	-2.3216
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	30504967	34864261	2575	-0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	34875241	34889148	23	-0.5206
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	34890512	72541504	23782	-7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	72541524	72583736	45	-1.2793
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	72584492	86366556	9072	0.0083
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	86366865	86383391	13	-0.9922
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	86387773	103960907	11006	0.0078
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	103965022	103965310	2	-2.0817
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	103979561	105814899	943	-0.0023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	105820728	105822727	6	-0.9682
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	105822742	105823898	11	-2.3269
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	105825578	110028919	2667	0.0129
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	110029023	110041701	19	-1.0944
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	110044476	112491849	1958	0.0086
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	112497488	112498764	23	0.6453
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	112498899	147811996	6554	0.0069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	147812010	147884075	5	1.0168
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	147884112	148296326	160	-0.0212
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	148296607	148299969	3	-1.0252
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	148310168	150822330	1325	0.0134
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	150822391	150852862	30	2.2611
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	150852902	195005246	29766	0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	195005259	195050249	43	-0.4625
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	195055609	195079130	46	-0.1712
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	195079153	195082414	2	-3.4299
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	195083353	227877792	21893	0.001
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	227883479	227886819	3	-2.9231
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	227887079	246776239	13881	0.0045
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	246776293	246780491	2	1.4074
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	246780614	247191011	181	0.0639
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	2	2784	35820627	25040	0.0064
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	2	35820889	35841420	9	1.1057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	2	35841451	52595241	12163	0.0126
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	2	52597429	52635046	41	0.6752
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	2	52641453	60938157	5821	0.0098
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	2	60939227	60958569	11	-0.9513
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	2	60963931	89349583	17043	0.0087
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	2	89352101	89912071	172	1.1616
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	2	89938569	91173917	54	0.2917
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	2	91176561	106241154	6575	0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	2	106246527	106248065	4	-1.3199
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	2	106249661	106251789	8	-3.3738
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	2	106253687	242738129	83109	0.0063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	35345	46768381	33249	0.0091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	46776821	46824183	39	-0.6348
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	46824593	47453513	270	-0.0074
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	47466826	47467724	2	-1.8724
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	47472218	68828854	14300	0.0032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	68828949	68830103	14	1.1152
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	68831448	100420474	15956	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	100427148	100432004	37	-2.1124
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	100432111	129881911	18114	0.0063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	129887861	129903989	10	0.6397
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	129904285	131269429	632	0.0259
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	131269443	131290966	45	0.5405
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	131291245	164023184	20301	0.0105
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	164028410	164108674	47	-0.3276
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	164108689	177366443	8162	0.0146
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	177370753	177398915	35	-0.8623
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	177399007	194360739	10997	0.0077
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	194360889	194365597	17	-1.1812
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	194369129	196895127	1491	0.0088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	196897393	196932593	23	0.5354
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	196941179	199380515	1193	0.0354
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	2281	9468995	5423	0.0088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	9468999	9473325	3	-1.2109
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	9474140	9819488	379	0.0201
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	9823258	9840596	29	2.1633
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	9843312	9844366	7	0.5906
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	9845240	10002252	173	0.0304
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	10007416	10009766	14	-0.5582
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	10011816	28810639	13413	0.001
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	28811692	28822295	3	-1.5887
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	28823067	34455370	3384	0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	34455399	34500578	41	0.7174
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	34501120	35691376	778	-0.0027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	35691528	35691913	2	-2.9332
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	35693913	48962605	8208	0.0129
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	48985949	48986112	2	-2.0162
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	48991977	64376535	7605	0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	64380064	64390853	29	0.4821
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	64399026	69475459	2952	0.0073
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	69477123	69485755	2	1.5831
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	69512426	70172636	330	0.0277
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	70177963	70237072	28	0.4667
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	70238508	115393149	27368	0.0071
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	115394772	115401624	22	0.8054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	115403678	132158955	9954	0.006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	132159657	132577643	207	0.6038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	132581156	138311689	3100	0.0178
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	138311870	138327813	18	-0.4891
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	138327937	138402686	98	-0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	138402701	138408210	19	0.3966
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	138408233	153009236	8760	0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	153010983	153012341	13	-0.994
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	153014246	172605921	12569	0.0083
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	172611459	172614285	10	1.6124
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	172614299	191261904	12537	0.0156
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	68532	7222476	5745	0.0028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	7230338	7242925	26	-0.8406
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	7255635	12853889	4450	0.0045
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	12868780	12891533	14	-1.1372
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	12902201	15769127	1974	0.0074
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	15771492	15773597	12	-0.6155
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	15776346	57357403	23675	0.007
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	57361784	57369290	32	1.6119
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	57374114	68882059	7304	-1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	68903050	69153891	5	0.8568
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	69269183	75790305	3430	0.0101
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	75793034	75803024	6	-1.0547
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	75803091	97070877	12191	0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	97074222	97125076	43	-0.8142
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	97125440	180307129	54021	0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	180311316	180365831	20	0.825
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	180365870	180722926	170	0.0215
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	94661	8486018	6936	0.0061
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	8487229	8487242	2	-1.4723
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	8490431	23168970	10803	0.0061
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	23168974	23168978	2	-1.8097
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	23172233	26846882	2548	-0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	26846987	26860551	7	0.9578
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	26862360	32689867	2703	5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	32690181	32733915	21	-0.7564
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	32734596	54039043	13746	0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	54039110	54039814	7	-0.9568
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	54043307	67064983	5459	0.0159
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	67065007	67105350	55	-0.5131
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	67106127	77492878	6781	0.0036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	77493251	77509476	22	0.5974
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	77517792	170892930	60851	0.0051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	52911	6859833	3457	0.0148
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	6864765	6895226	10	-0.7368
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	6896187	8792410	1622	0.0083
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	8793695	8832522	50	-0.9885
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	8839521	109221034	62243	0.0073
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	109224328	109228480	25	-0.6156
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	109228865	109241146	10	-1.701
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	109241218	125832210	10032	0.0114
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	125832718	125833851	12	0.8125
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	125834112	125834117	6	-0.7078
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	125840002	133429177	4698	-0.0056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	133429189	133440983	28	0.3866
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	133446174	141409593	5211	0.0089
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	141416112	141445459	45	0.293
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	141445586	143535212	1313	0.0239
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	143540168	143540378	3	-0.8397
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	143542557	143681866	37	0.4098
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	143682164	158819765	9699	0.0127
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	21254	583041	326	0.0441
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	584944	585908	10	1.8502
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	591043	2689341	1784	0.0206
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	2690940	2691306	7	-0.8957
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	2694578	15337333	11947	0.0107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	15338302	15339816	2	-4.269
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	15341074	18309434	2676	0.0125
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	18310437	18315465	4	-1.9592
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	18315667	23458220	3945	0.0066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	23458253	23463850	7	-0.6931
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	23466270	24786719	954	-0.0115
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	24791926	24791981	2	0.905
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	24792789	25030393	183	-0.0094
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	25030439	25040167	24	0.8499
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	25040250	39349816	9038	0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	39354760	39506122	59	0.7824
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	39507456	112363642	42051	0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	112363846	112364421	5	-1.7456
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	112364436	115700612	1823	0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	115701219	115710907	36	-0.4406
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	115719873	122580858	4632	0.0062
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	122582974	122588023	12	0.5688
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	122592919	131903685	6574	0.0051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	131904367	131905912	5	-0.9117
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	131907802	146268959	9845	0.0141
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	36587	10393105	9982	0.0171
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	10394138	10394986	2	1.328
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	10397943	22482889	9884	0.0113
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	22491913	22492699	2	1.3936
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	22499340	23351805	581	0.0093
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	23353115	23363484	8	0.7883
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	23368488	41622708	10874	0.014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	41682297	43674215	71	-0.3229
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	43680535	44569219	58	0.1517
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	44667855	44795733	36	-1.3853
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	44806024	67673801	154	-0.1835
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	67675871	67678367	8	1.6635
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	67699736	68213055	82	0.0214
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	68218497	69231763	105	-0.359
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	69231764	139372768	47644	0.0036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	139375463	139375654	3	1.4853
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	139392824	140211215	413	0.0151
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	62759	1433164	830	0.0268
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	1433180	1433180	2	-1.6782
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	1433215	18123568	14056	0.0055
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	18146449	18168253	3	-1.3864
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	18176754	24417680	4351	0.0048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	24417681	24418060	10	-2.248
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	24418914	45632493	12316	0.0057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	45905767	46094186	9	0.6449
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	46111165	47417400	370	-0.0154
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	47432905	47468066	3	-0.8885
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	47480482	48522382	295	0.0099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	48548797	48554762	2	-2.0223
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	48567024	58182451	6334	0.0197
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	58182551	58196843	43	-0.5999
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	58202758	58764823	452	0.0399
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	58764966	58765209	5	0.9549
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	58765294	61035080	1631	-0.0017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	61035188	61036270	7	0.8112
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	61036311	66975117	4018	0.009
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	66976085	66996700	38	0.3831
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	66997173	135079131	46169	0.0056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	135079709	135079858	2	-2.3035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	135082644	135356694	150	0.0028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	188510	4195630	1791	0.0093
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	4206589	4284748	25	-0.5288
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	4292454	4924226	662	0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	4924693	4933190	38	0.7939
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	4933390	5740499	787	0.0069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	5743981	5765624	32	-0.4518
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	5765715	11546287	4286	0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	11546477	11549487	11	-0.9621
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	11549603	48554998	25802	0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	48558010	48559252	2	-1.4874
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	48562894	48662419	40	0.0563
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	48666304	48690201	12	0.6257
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	48690679	51176142	829	0.0417
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	51176176	51185372	6	0.8147
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	51185373	51419895	93	0.0305
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	51420212	54788596	46	0.3886
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	54790851	89114479	20185	0.0076
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	89127597	89189872	13	-0.6379
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	89207189	134449982	32487	0.0057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	20703	33185927	22874	0.0098
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	33192673	33198641	27	-0.3638
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	33199627	47011309	7345	0.024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	47011506	47011682	3	-1.1987
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	47016303	89007481	25562	0.0045
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	89015800	89016205	7	-1.0326
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	89017688	98315945	6456	0.0096
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	98319424	98322283	25	-0.5191
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	98322321	129530671	21255	0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	129533799	129537663	2	1.6168
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	129539142	130339919	601	0.0119
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	130341251	130341261	2	-1.9982
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	130341584	130362400	9	0.5881
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	130369745	130686668	319	0.0088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	130698537	130699288	13	-2.0773
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	130708284	132288262	572	0.0536
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	13	17924949	22527210	2895	0.0179
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	13	22530678	22531515	12	-2.1971
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	13	22536195	36969135	10654	0.0067
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	13	36970036	36982757	16	0.9993
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	13	36986330	71374989	21561	0.0115
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	13	71375556	71378557	4	1.1712
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	13	71378606	114126499	29149	0.008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	18072124	40680246	13841	0.0107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	40680440	40726999	13	-2.8541
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	40727099	73076460	20494	0.0047
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	73076604	73090732	7	-1.3949
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	73099653	85521664	8276	0.0031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	85530379	85558194	37	-0.8094
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	85559964	105531947	12483	0.008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	105550720	105550986	2	-1.7503
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	105553173	105598011	20	-0.0329
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	105601409	105618552	9	-0.9338
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	105619258	105622617	4	-2.9343
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	105624231	105786375	70	-0.781
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	105786534	105794561	8	-1.5342
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	105798514	105854089	29	-0.589
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	105867070	106231370	226	0.1167
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	106231444	106245617	12	-0.5261
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	106247258	106356482	76	0.0655
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	15	18276341	18463975	47	-0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	15	18466953	19135859	125	0.2989
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	15	19136332	19566875	134	-0.0036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	15	19764921	20224763	117	0.5831
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	15	20232440	28278679	4686	0.0128
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	15	28280653	28688170	103	-0.2947
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	15	28700879	74665417	29138	7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	15	74678296	74682830	22	-1.852
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	15	74689234	100286563	17681	0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	16	777	22466498	14852	0.0127
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	16	22466558	22611252	67	-0.3036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	16	22611363	22612021	2	-3.8553
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	16	22618243	54354095	12403	0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	16	54355723	54356280	3	2.2182
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	16	54361849	71939207	10513	0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	16	71947785	71948643	5	-0.8484
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	16	71950822	76929109	4008	0.0075
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	16	76929941	76942239	16	1.1291
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	16	76942266	77375001	564	0.0229
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	16	77375070	77376414	2	-1.3526
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	16	77376434	88815036	10075	0.0172
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	17	526	16352112	10404	0.0122
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	17	16353067	16355182	5	-0.9699
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	17	16355512	16603639	102	0.0117
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	17	16603776	16663526	8	-0.9407
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	17	16676257	16682240	4	0.4895
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	17	16682253	18260587	920	-0.0019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	17	18296117	18353283	18	1.2697
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	17	18367186	18405946	11	0.632
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	17	18409922	31450358	6912	0.0064
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	17	31452528	31559764	47	0.4101
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	17	31567456	73792963	24522	0.0091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	17	73793727	73794563	2	1.551
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	17	73798338	78643088	2338	0.0253
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	18	1543	76116029	50809	0.0099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	19	41910	58208894	25913	0.0115
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	19	58210326	58244041	23	0.9371
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	19	58246052	63789666	3416	0.0253
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	20	9305	1508999	1206	0.0242
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	20	1509580	1541893	41	-1.3639
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	20	1545946	62426597	41249	0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	21	9758742	9965425	35	0.3558
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	21	9975295	35342258	15805	0.0082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	21	35342656	35342745	2	-1.884
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	21	35342943	46921385	8571	0.0136
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	22	14432528	15063416	96	-0.103
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	22	15244898	15668220	145	0.4825
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	22	15679901	37693565	15271	0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	22	37693630	37705253	23	-0.5006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	22	37719574	49581321	8030	0.0088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	X	108477	4302415	1240	-0.0125
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	X	4303277	4303736	2	-3.9903
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	X	4303763	33954294	20068	0.013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	X	33956474	33980208	23	-3.9642
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	X	33983346	134083710	50390	0.018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	X	134124304	134159698	22	1.1651
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	X	134160045	154835548	12755	0.0153
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	Y	2710438	57427647	8587	-0.9185
