Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	61735	15489638	7992	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	15489657	15489862	4	0.9369
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	15489931	17011510	780	-0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	17011560	17016872	14	-0.3825
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	17016880	17048405	18	0.4337
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	17048479	30731522	7781	0.0092
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	30731577	30731698	2	-2.3216
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	30732380	35091674	2575	-0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	35102654	35116561	23	-0.5206
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	35117925	72768916	23862	-7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	72768936	72811148	45	-1.2793
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	72811904	86593968	9066	0.0084
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	86594277	86610803	13	-0.9922
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	86615185	104159384	11003	0.008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	104163499	104163787	2	-2.0817
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	104178038	106013376	943	-0.0023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	106019205	106021204	6	-0.9682
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	106021219	106022375	11	-2.3269
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	106024055	110227396	2667	0.0129
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	110227500	110240178	19	-1.0944
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	110242953	112690326	1958	0.0086
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	112695965	112697241	23	0.6453
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	112697376	149545372	6550	0.0071
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	149545386	149617451	5	1.0168
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	149617488	150029702	160	-0.0212
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	150029983	150033345	3	-1.0252
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	150043544	152555706	1326	0.0132
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	152555767	152586238	30	2.2611
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	152586278	196738623	29765	0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	196738636	196783626	43	-0.4625
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	196788986	196812507	46	-0.1712
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	196812530	196815791	2	-3.4299
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	196816730	229811169	21893	0.0011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	229816856	229820196	3	-2.9231
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	1	229820456	249224388	14062	0.0055
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	2	12784	35967123	25038	0.0064
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	2	35967385	35987916	9	1.1057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	2	35987947	52741737	12162	0.0127
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	2	52743925	52781542	41	0.6752
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	2	52787949	61084653	5819	0.0099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	2	61085723	61105065	11	-0.9513
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	2	61110427	89568468	17037	0.0088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	2	89570986	90274766	172	1.1616
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	2	90301264	91810190	54	0.2917
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	2	91812834	106874722	6575	0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	2	106880095	106881633	4	-1.3199
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	2	106883229	106885357	8	-3.3738
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	2	106887255	243089456	83108	0.0062
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	60345	46793377	33249	0.0091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	46801817	46849179	39	-0.6348
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	46849589	47478509	270	-0.0074
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	47491822	47492720	2	-1.8724
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	47497214	68746164	14300	0.0032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	68746259	68747413	14	1.1152
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	68748758	98937784	15950	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	98944458	98949314	37	-2.1124
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	98949421	128399221	18114	0.0063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	128405171	128421299	10	0.6397
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	128421595	129786739	632	0.0259
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	129786753	129808276	45	0.5405
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	129808555	162540490	20300	0.0105
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	162545716	162625980	47	-0.3276
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	162625995	175883749	8163	0.0146
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	175888059	175916221	35	-0.8623
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	175916313	192878045	10997	0.0077
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	192878195	192882903	17	-1.1812
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	192886435	195409946	1491	0.0088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	195412212	195446922	23	0.5354
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	3	195455508	197896118	1193	0.0354
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	12281	9859897	5423	0.0088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	9859901	9864227	3	-1.2109
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	9865042	10210390	379	0.0201
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	10214160	10231498	29	2.1633
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	10234214	10235268	7	0.5906
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	10236142	10393154	173	0.0304
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	10398318	10400668	14	-0.5582
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	10402718	29201541	13413	0.001
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	29202594	29213197	3	-1.5887
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	29213969	34778975	3384	0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	34779004	34824183	41	0.7174
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	34824725	36014981	778	-0.0027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	36015133	36015518	2	-2.9332
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	36017518	49267848	8207	0.0128
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	49291192	49291355	2	-2.0162
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	49297220	64693940	7603	0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	64697469	64708258	29	0.4821
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	64716431	70138047	3286	0.0098
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	70143374	70202483	28	0.4667
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	70203919	115173700	27372	0.0071
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	115175323	115182175	22	0.8054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	115184229	131939505	9957	0.006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	131940207	132358193	207	0.6038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	132361706	138092239	3098	0.0176
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	138092420	138108363	18	-0.4891
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	138108487	138183236	98	-0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	138183251	138188760	19	0.3966
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	138188783	152789786	8763	0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	152791533	152792891	13	-0.994
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	152794796	172369346	12569	0.0083
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	172374884	172377710	10	1.6124
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	4	172377724	191027923	12536	0.0156
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	15532	7169476	5747	0.0027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	7177338	7189925	26	-0.8406
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	7202635	12800889	4450	0.0045
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	12815780	12838533	14	-1.1372
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	12849201	15716127	1974	0.0074
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	15718492	15720597	12	-0.6155
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	15723346	57321646	23671	0.007
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	57326027	57333533	32	1.6119
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	57338357	68846303	7304	-1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	68867294	69118135	5	0.8568
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	69233427	75754549	3432	0.0101
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	75757278	75767268	6	-1.0547
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	75767335	97045121	12190	0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	97048466	97099320	43	-0.8142
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	97099684	180374523	54023	0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	180378710	180433225	20	0.825
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	5	180433264	180790320	170	0.0215
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	149661	8541019	6937	0.0062
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	8542230	8542243	2	-1.4723
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	8545432	23060991	10801	0.006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	23060995	23060999	2	-1.8097
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	23064254	26738903	2548	-0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	26739008	26752572	7	0.9578
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	26754381	32580617	2701	8e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	32581838	32625937	25	-0.6628
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	32626618	53931084	13745	0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	53931151	53931855	7	-0.9568
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	53935348	67008262	5460	0.0159
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	67008286	67048629	55	-0.5131
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	67049406	77436159	6780	0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	77436532	77452757	22	0.5974
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	6	77461073	171051005	60857	0.0051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	43355	6893308	3455	0.0146
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	6898240	6928701	10	-0.7368
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	6929662	8825885	1622	0.0083
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	8827170	8865997	50	-0.9885
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	8872996	109433798	62247	0.0073
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	109437092	109441244	25	-0.6156
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	109441629	109453910	10	-1.701
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	109453982	126044974	10033	0.0113
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	126045482	126046615	12	0.8125
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	126046876	126046881	6	-0.7078
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	126052766	133778637	4699	-0.0057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	133778649	133790443	28	0.3866
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	133795634	141763124	5211	0.0089
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	141769643	141798990	45	0.293
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	141799117	143904279	1311	0.0237
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	143909235	143909445	3	-0.8397
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	143911624	144050933	37	0.4098
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	7	144051231	159127004	9700	0.0127
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	31254	593041	326	0.0441
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	594944	595908	10	1.8502
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	601043	2701934	1785	0.0205
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	2703533	2703899	7	-0.8957
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	2707171	7193821	5706	0.022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	7214611	7744064	136	-0.2613
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	7745979	7747134	3	-1.8774
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	7747699	15292962	6101	0.0071
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	15293931	15295445	2	-4.269
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	15296703	18265154	2676	0.0125
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	18266157	18271185	4	-1.9592
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	18271387	23402275	3945	0.0066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	23402308	23407905	7	-0.6931
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	23410325	24730823	954	-0.0115
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	24736025	24736080	2	0.905
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	24736887	24974476	183	-0.0094
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	24974522	24984250	24	0.8499
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	24984333	39230659	9039	0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	39235603	39386965	59	0.7824
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	39388299	112294466	42055	0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	112294670	112295245	5	-1.7456
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	112295260	115631436	1826	0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	115632043	115641731	36	-0.4406
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	115650697	122511677	4631	0.0063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	122513793	122518842	12	0.5688
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	122523738	131834503	6574	0.0051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	131835185	131836730	5	-0.9117
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	8	131838620	146298155	9845	0.0141
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	46587	10403105	9984	0.017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	10404138	10404986	2	1.328
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	10407943	22492889	9886	0.0113
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	22501913	22502699	2	1.3936
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	22509340	23361805	580	0.0094
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	23363115	23373484	8	0.7883
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	23378488	41632708	10879	0.0141
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	41692297	43734219	71	-0.3229
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	43740539	44629223	58	0.1517
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	44727859	44855737	36	-1.3853
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	44866028	68183981	155	-0.1873
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	68186051	68188547	8	1.6635
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	68209916	68823235	82	0.0214
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	68828677	69941943	105	-0.359
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	69941944	140252947	47650	0.0036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	140255642	140255833	3	1.4853
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	9	140273003	141091394	413	0.0151
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	72759	1443164	830	0.0268
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	1443180	1443180	2	-1.6782
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	1443215	18083562	14056	0.0055
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	18106443	18128247	3	-1.3864
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	18136748	24377674	4350	0.0048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	24377675	24378054	10	-2.248
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	24378908	46312487	12316	0.0057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	46485761	46674180	9	0.6449
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	46691159	47897394	370	-0.0154
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	47912899	47948060	3	-0.8885
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	47960476	48902376	295	0.0099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	48928791	48934756	2	-2.0223
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	48947018	58512445	6335	0.0197
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	58512545	58526837	43	-0.5999
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	58532752	59094817	452	0.0399
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	59094960	59095203	5	0.9549
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	59095288	61365074	1631	-0.0017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	61365182	61366264	7	0.8112
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	61366305	67305111	4017	0.0089
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	67306079	67326694	38	0.3831
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	67327167	135229141	46167	0.0056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	135229719	135229868	2	-2.3035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	10	135232654	135506704	150	0.0028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	198510	4239054	1790	0.0094
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	4250013	4328172	25	-0.5288
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	4335878	4967650	662	0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	4968117	4976614	38	0.7939
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	4976814	5783923	787	0.0069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	5787405	5809048	32	-0.4518
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	5809139	11589711	4286	0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	11589901	11592911	11	-0.9621
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	11593027	48598422	25799	0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	48601434	48602676	2	-1.4874
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	48606318	48705843	40	0.0563
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	48709728	48733625	12	0.6257
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	48734103	51319566	829	0.0417
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	51319600	51328796	6	0.8147
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	51328797	51563319	93	0.0305
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	51563636	55032020	46	0.3886
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	55034275	89474831	20185	0.0076
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	89487949	89550224	13	-0.6379
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	11	89567541	134944770	32480	0.0057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	150442	33294660	22870	0.0098
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	33301406	33307374	27	-0.3638
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	33308360	48725042	7344	0.024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	48725239	48725415	3	-1.1987
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	48730036	90483350	25561	0.0045
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	90491669	90492074	7	-1.0326
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	90493557	99791814	6456	0.0096
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	99795293	99798152	25	-0.5191
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	99798190	130964718	21253	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	130967846	130971710	2	1.6168
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	130973189	131773966	601	0.0119
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	131775298	131775308	2	-1.9982
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	131775631	131796447	9	0.5881
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	131803792	132120715	319	0.0088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	132132584	132133335	13	-2.0773
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	12	132142331	133778189	572	0.0536
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	13	19026949	23629210	2895	0.0179
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	13	23632678	23633515	12	-2.1971
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	13	23638195	38071135	10652	0.0066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	13	38072036	38084757	16	0.9993
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	13	38088330	72476988	21560	0.0115
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	13	72477555	72480556	4	1.1712
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	13	72480605	115108397	29148	0.0081
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	19002124	41610496	13839	0.0107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	41610690	41657249	13	-2.8541
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	41657349	74006707	20492	0.0048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	74006851	74020979	7	-1.3949
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	74029900	86451911	8277	0.0031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	86460626	86488441	37	-0.8094
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	86490211	106460902	12483	0.008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	106479675	106479941	2	-1.7503
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	106482128	106526966	20	-0.0329
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	106530364	106547507	9	-0.9338
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	106548213	106551572	4	-2.9343
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	106553186	106715330	70	-0.781
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	106715489	106723516	8	-1.5342
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	106727469	106783044	29	-0.589
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	106796025	107160325	226	0.1167
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	107160399	107174572	12	-0.5261
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	14	107176213	107285437	76	0.0655
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	15	20016328	20203961	47	-0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	15	20206939	20875845	125	0.2989
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	15	20876318	22042753	134	-0.0036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	15	22263557	22673399	117	0.5831
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	15	22681076	30491387	4687	0.0127
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	15	30493361	30900878	103	-0.2947
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	15	30913587	76878362	29135	7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	15	76891241	76895775	22	-1.852
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	15	76902179	102469040	17680	0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	16	60777	22558997	14851	0.0127
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	16	22559057	22703751	67	-0.3036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	16	22703862	22704520	2	-3.8553
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	16	22710742	55796594	12402	0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	16	55798222	55798779	3	2.2182
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	16	55804348	73381706	10431	0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	16	73390284	73391142	5	-0.8484
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	16	73393321	78371608	4008	0.0075
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	16	78372440	78384738	16	1.1291
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	16	78384765	78817500	564	0.0229
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	16	78817569	78818913	2	-1.3526
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	16	78818933	90287535	10078	0.0173
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	17	526	16411387	10405	0.0123
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	17	16412342	16414457	5	-0.9699
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	17	16414787	16662914	102	0.0117
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	17	16663051	16722801	8	-0.9407
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	17	16735532	16741515	4	0.4895
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	17	16741528	18319862	920	-0.0019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	17	18355392	18412558	18	1.2697
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	17	18426461	18465221	11	0.632
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	17	18469197	34426245	6912	0.0064
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	17	34428415	34535651	47	0.4101
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	17	34543343	76281368	24521	0.0091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	17	76282132	76282968	2	1.551
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	17	76286743	81049726	2338	0.0253
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	18	11543	78015057	50806	0.0099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	19	90910	53517082	25912	0.0115
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	19	53518514	53552229	23	0.9371
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	19	53554240	59097854	3416	0.0253
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	20	61305	1560999	1206	0.0242
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	20	1561580	1593893	41	-1.3639
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	20	1597946	62956153	41252	0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	21	10736871	10943554	35	0.3558
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	21	10953424	36420388	15806	0.0082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	21	36420786	36420875	2	-1.884
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	21	36421073	48096957	8569	0.0136
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	22	16052528	16683416	96	-0.103
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	22	16864898	17288220	145	0.4825
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	22	17299901	39363619	15270	0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	22	39363684	39375307	23	-0.5006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	22	39389628	51234455	8031	0.0088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	X	168477	34044373	21311	0.0113
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	X	34046553	34070287	23	-3.9642
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	X	34073425	134256044	50380	0.0187
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	X	134296638	134332032	22	1.1651
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	X	134332379	155182354	12751	0.0154
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_D12_895832	Y	2650438	59018259	8632	-0.9192
